Salmo trutta (river trout): 115171490
Help
Entry
115171490 CDS
T08542
Name
(RefSeq) TBC1 domain family member 2A-like isoform X1
KO
K20165
TBC1 domain family member 2A
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
stru04131
]
115171490
Membrane trafficking [BR:
stru04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
115171490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
PH
PH_11
PH_alsin
PH_8
PH_3
Sec20
Motif
Other DBs
NCBI-GeneID:
115171490
NCBI-ProteinID:
XP_029584215
Ensembl:
ENSSTUG00000004924
LinkDB
All DBs
Position
3:27538333..27562153
Genome browser
AA seq
1010 aa
AA seq
DB search
MACYYLEKEFKTSSVMEGEDPKGNPSTASSHSLPPQAEAVSPADEDDCITTRRNSEETAT
HTNSMGQPSQDHQSEGVPAKTAATDNNQSQSATTMDNQAQQQPTESLSNTKLCGYLLKQG
GPLKSWKWRWFTYEEKKSQLFYYRTAQDVTSLGRIELCSATFGYPLHGEQGTFHIQTPER
TFVLKADNQEAMMYWLQQLQLKRLQHREQLTGESTRHCTDHQRPEGQGELPTRPDDFLPT
VKTPPGLLGEEAANLPAPQQRAPLSNFSLKHPLIEIQNSVHSLFYKRSSQELSRSVFHLE
APPPWTPLNPSTTPSTTPYQTAQDRLDPRTPVDPPTPTAPLLLADPAGERSPGKGRSFPC
PSPRIRRKTRGSSSTMPAALREAASDKTTRLQQEKHMLAEEVKAQKELVWLLHKALEAAQ
LEKRTCTEFLAAECEQERLELLRHRERQAADLQGRLEELKAEAEGLRASLAQRDAHVAEL
QENITLMMAKNHSKQEVILKLSEQVAACMADPRRTMSTTNGLEALTFHQLQEDTENLKDD
IEAYKIQNKFLNSEIYQLTKLWRNSSEQEKSLMVKCAYLEARNCQIESRYLGVLRKLQES
NALEPGQREAVRNLIEDALKGDLNDVLELNPVREHDEYGFKIIPDYEVEDMKLLAKIQAL
EIRSHNLLRQEAGVRPLLDRWAQYMGGRPADDLCPSPELKFLLRCGVPREYRPRVWRWVV
RARTRSLRERHPDRYEQLCQKSLTSPHQASRQIQLDLHRTLTTNQRFSSPSSPTLQQLQR
ILLAFSWQNPTIGYCQGLNRLAAIVLLVLESEEDAFWCLVAVVETIMPQDYYTKTLIASQ
VDQRVLKDFMAEKMPRLTAHFEEHSVDVSLITFSWFLVVFVESLPSDILLRVWDAFLYEG
TKVIFRYALALFKYKEEDILNIHDNVEIYQYLRFFTKTISDGRKLTNIAFSDMNPFPMKL
LKNRRALHLERLQGELRELEAQQREFVTESAERKDKDLDTILVSEDDEDL
NT seq
3033 nt
NT seq
+upstream
nt +downstream
nt
atggcatgttattacttggagaaggagtttaaaacgagtagtgtgatggagggagaggac
ccaaaaggaaatcccagcactgcctcgtctcactcacttcctccccaagcagaggcggta
agcccagcggatgaggatgattgtatcacaacacggaggaactctgaagagaccgctaca
cacacaaacagcatgggccagccgagtcaggaccaccagagtgaaggggtcccagctaag
actgctgccacagacaacaaccagagtcagtctgccaccaccatggacaaccaagcccag
caacaacccacggaaagcctgtctaacactaaactatgtgggtatctccttaaacaagga
ggtcccctgaagtcgtggaagtggcgctggttcacgtacgaggagaagaagagccagttg
ttttactacaggaccgcgcaggatgtgacctctttggggaggattgagctgtgcagcgcc
acgttcggttaccccctccatggagagcagggcacctttcacatccagacccccgaacgg
accttcgtcctcaaggcagataaccaggaagccatgatgtactggctacaacagctgcag
ctgaagagattgcagcaccgagaacagctgacaggagaatccacacgtcactgcactgat
caccagagaccagaggggcagggggaactacccaccaggccagatgacttcctgcccacc
gtgaagaccccgccaggcctcttgggcgaggaggctgccaatctgcccgcgccgcaacaa
cgggcccccctaagcaacttctctcttaaacatcctctgatagagattcagaactcggtg
cacagtcttttttacaagcggtcctcccaggaactgagtcggagtgtgttccatttggag
gcgcctcctccctggaccccactgaacccttcaacgaccccttcaacgaccccctaccag
acagcccaggacaggcttgaccctaggactcccgttgaccccccgactcctaccgccccg
ctgctgttggcggaccctgcgggtgagcgctcccctgggaagggcaggtcgttcccatgc
ccgtccccgaggatcaggaggaagacgaggggcagctcttccaccatgcccgctgcacta
cgggaagctgcttcagacaagacgacccgccttcagcaggagaaacacatgctggctgag
gaggtcaaggcccagaaggagctggtgtggcttctccacaaggccctggaggcggctcag
ctggagaagcggacctgcaccgagttcctggcagccgagtgtgagcaggagcgtctggag
ctgttgaggcaccgcgagcgccaagccgctgacctgcagggtcgtctggaggagctgaag
gccgaggcggagggtctgagggcgagtttggcccaaagggacgcccacgtggccgagctg
caggaaaacatcaccctgatgatggcgaagaaccactccaaacaggaggtgatcctgaag
ctgtcagagcaggtggcagcctgcatggccgaccctagacgcaccatgtccaccactaat
ggcctggaggccctgaccttccaccagctgcaggaggacactgagaacctcaaggatgac
attgaggcctacaagatccagaacaagttcctgaactctgagatctaccagctgaccaag
ctatggcgcaacagttcagagcaggagaaaagccttatggtaaagtgtgcctacctggag
gcccgtaactgtcagatagagagtcgttacctgggtgtactgaggaagctgcaggagagc
aatgcactagaaccgggccagcgggaggctgtgaggaacctcatagaagacgcactgaaa
ggagacctgaacgacgtcctcgaactcaaccctgtcagggagcacgatgagtacggcttc
aagatcatcccggactacgaggtggaggacatgaagctgctggccaagatccaggccctg
gagatccgctcccacaacctgctgaggcaggaggccggggtcagacccctgttggaccgc
tgggctcagtacatgggcggccgcccggccgacgacctctgcccctccccggagctcaaa
ttcctgctgcggtgtggcgtgccacgggagtaccgcccacgggtgtggcgatgggtggtg
agggcccgcacacgctcgctgagggagcgccacccggatcgctatgagcagctgtgccag
aagagccttacgtcaccccaccaagcctccagacagatccagttggacctgcaccgcacg
ctcaccaccaatcagcgcttttcctcgccctccagccccactctgcagcagctccaacga
attctgctagctttctcctggcaaaaccccaccatcggctactgccagggcctcaacagg
ttggcagccatagttctcctggtgctggagagtgaggaggatgccttctggtgtctagta
gctgtggtggagaccatcatgcctcaggactactacaccaaaacactcatagcctcgcag
gtggaccagcgtgtgctgaaggacttcatggcggagaaaatgccccgactgacagcccac
tttgaggagcatagtgtggacgtgtccctcatcaccttcagctggttcctggtggtgttc
gttgagagcctgcccagcgacatcctcctgcgggtgtgggacgccttcctctacgagggc
accaaggtgatatttcggtatgccctggctctgttcaagtacaaagaggaggacatcttg
aacatccatgacaacgtggagatctaccaatacctgcgcttcttcaccaagaccatctct
gacggcaggaaactgaccaacatagccttcagcgacatgaacccgttccccatgaagctg
ttgaagaaccggcgtgcgctgcatctggagcgcctgcagggggagctcagagagctggag
gcccagcagagggagtttgtcacagagagcgcagagcgtaaggacaaggacctggacact
atactagtcagcgaggacgatgaggacctgtag
DBGET
integrated database retrieval system
