Salmo trutta (river trout): 115171492
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Entry
115171492 CDS
T08542
Name
(RefSeq) leucine-rich repeat-containing protein 4B-like
KO
K16360
netrin-G3 ligand
Organism
stru
Salmo trutta (river trout)
Pathway
stru04514
Cell adhesion molecule (CAM) interaction
stru04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
115171492
04517 IgSF CAM signaling
115171492
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
stru04515
]
115171492
Cell adhesion molecules [BR:
stru04515
]
Immunoglobulin superfamily
NGL family
115171492
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
LRR_9
LRR_14
ig
LRR_1
V-set
LRR_NXF1-5
Ig_2
LRRNT
VEGFR1-3_N_Ig-like
LRR_EndoS
Motif
Other DBs
NCBI-GeneID:
115171492
NCBI-ProteinID:
XP_029584222
LinkDB
All DBs
Position
32:complement(23959793..23988752)
Genome browser
AA seq
730 aa
AA seq
DB search
MRITTVTCLPCPSPLLLLLVQLLLRLLLSGPEFVGAASPCPTHCSCSNQASRVICTRQGL
DGVPESISVNTRYLNLQENSIEVIKSDTFKHLRHLEILQLSKNKISQIEVGAFNGLPNLN
TLELFDNRLTLVPSQAFEYLSKLRELWLRNNPIETLPGYAFHRVPSLRRLDLGELKKLDY
ISDAAFVGLVNLRYLNLGMCGLKDIPNLTALVRLEELELSGNRLEIIRPGSFQGLVSLRK
LWLMHSQVKVIERNAFDDLKNLEELNLSHNSLHSLPHDLFTPLHQLERVHLNHNPWVCNC
DVLWLSWWLKETVPSNTTCCARCHAPPGLKGRYIGELDQSHFTCYAPVIVEPPTDLNVTE
GMAAELKCRTGTTMTSVNWLTPNGTLMTHGSYRVRISVLHDGTLNFTNVTLRDTGQYTCM
VTNSAGNTTATAVLNVTAADVGVSYFTTVTVETVEPNEGPTVYAGVMNSHNESYVITPSG
HQWRGGVPTTASSLSAWSLSSSRATRPTFTVPITAETGYSGLDDVMKTTKIIIGCFVAIT
FMAAVMLVVFYKLRKQHQLHKHHGPARAIEIINVEDEIGAGAGGRGSGISGGGTVSRDGG
GVGGGQSLRMHHPEMVNLPNLARQEHLNHYYKAHHFNNKMMGLGMGLNNNNNPSLSPCSQ
TQSIPNSCAQGPTSTSGGTPTGGSLPSPVPLPQLGIHSSLKGLMGKGQNPQIEPLLFKSG
SKENVQETQI
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atgcgaatcaccacggtgacctgccttccctgcccctcccccctcctcctcctattggtc
cagctgctactgcggctcctcctgtctgggccagaatttgtaggggctgcctccccctgc
cccacccattgcagctgctccaatcaggccagtcgagtcatctgtacaagacagggtctg
gatggggtgcctgagagcatatcagtcaacacacgatacctcaacctgcaagagaattca
atagaggttatcaagtcagacaccttcaagcacttgaggcaccttgagatcctgcagctg
tctaagaacaaaatcagtcagattgaggtgggagcattcaatggcctgcccaacctcaat
acgctggagctgttcgacaaccgcctcaccctggtcccctcacaggccttcgagtacctc
agcaagctgcgggagctgtggttacggaacaaccccatcgagacgctgccgggctacgcc
ttccaccgcgtgccctcgctgcgccggctggacctgggagagctcaagaagctggactac
atctcagacgccgccttcgtgggcctggtcaacctgcgctacctgaacctgggcatgtgt
ggtctgaaggacatccccaacctgacggccctggtgcgtctggaggagctggagctgtct
gggaaccgtctggagatcatccggcctggctccttccagggcctggtgtcactccgtaag
ctgtggctcatgcactcgcaagtgaaggtcatcgagcgcaacgccttcgacgacctgaag
aacctggaggagctcaacctttcccacaactccctgcactcgctgccccatgacctcttc
accccgctgcaccagctggagcgggtgcacctcaaccacaacccctgggtgtgcaactgt
gacgtgctgtggctcagctggtggttgaaggagacggtgcccagtaacactacgtgctgc
gcccgctgtcacgctccccccggcctgaagggccggtacatcggggagctggaccagagc
cacttcacctgctacgctcccgtcatcgtggagccgcccaccgacctcaacgttaccgag
ggcatggctgcagagctgaagtgtcgcacgggcaccaccatgacctcggtcaactggctc
acgcccaacggcaccctgatgacccacggctcctaccgggtccggatctccgtgctgcac
gacggtacgctcaactttaccaacgtcaccctgagggacacgggtcagtacacctgcatg
gtgaccaactcggctggcaacaccacggcaaccgccgtgcttaatgtcactgccgccgac
gttggcgtcagctacttcactactgtcaccgtggagacggtagagcccaacgagggcccg
acagtctacgcgggcgtcatgaacagccacaacgagtcatacgtcattactccgtctggc
caccagtggagggggggggtccctaccaccgcctcctccctgtcagcctggtccttgtcc
tcgtccagggccacccggcccacctttactgtgcccatcactgccgagacgggctattct
ggccttgatgacgtgatgaagaccaccaagatcatcattggctgcttcgtggccattacc
ttcatggcagccgtgatgctggtggtcttctacaagctgaggaagcagcaccagctgcac
aagcaccacggccccgcccgcgccatcgagatcatcaacgtggaggacgagattggcgcc
ggtgccggtggacgcgggagcggcatctcagggggtggcaccgtctctcgggatggggga
ggagtaggaggagggcagagcctgaggatgcatcacccggagatggtcaacctgcccaac
ctggccagacaggagcacctcaaccactactacaaggcccaccacttcaacaacaagatg
atgggcctgggcatgggcctcaacaacaacaacaacccctccctctccccttgttcccag
acccagagcatccccaactcctgcgcacaggggcccacctccactagcggtggcaccccc
acgggtggctcgctgccctcccctgtgcccctgccccagctgggcatccacagctctctg
aaggggctcatggggaaaggccagaaccctcagatcgagcctctgctcttcaagagtggc
tccaaggagaatgtgcaagagactcagatctga
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