Salmo trutta (river trout): 115171706
Help
Entry
115171706 CDS
T08542
Name
(RefSeq) transducin beta-like protein 3
KO
K14555
U3 small nucleolar RNA-associated protein 13
Organism
stru
Salmo trutta (river trout)
Pathway
stru03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
115171706
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
stru03009
]
115171706
Ribosome biogenesis [BR:
stru03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
115171706
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
Beta-prop_WDR5
WD40
Beta-prop_THOC3
WD40_Prp19
Beta-prop_WDR3_2nd
WD40_WDHD1_1st
WD40_CDC20-Fz
Utp13
Beta-prop_WDR36-Utp21_1st
WDR55
Beta-prop_EML_2
Beta-prop_TEP1_2nd
EIF3I
WD40_Gbeta
Beta-prop_WDR36-Utp21_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_DCAF4
Beta-prop_TEP1_C
WDR90_beta-prop_4th
ANAPC4_WD40
Beta-prop_SCAP
Beta-prop_Aladin
Beta-prop_IFT122_1st
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_1st
Beta-prop_IFT140_1st
NBCH_WD40
Beta-prop_DCAF12
Beta-prop_VPS8
PEP5_VPS11_N
Beta-prop_NWD2_C
Beta-prop_Vps41
Beta-prop_NUP159_NUP214
WDR54
Beta-prop_HPS5
Beta-prop_WDR19_2nd
Beta-prop_WDR35_TULP_N
Motif
Other DBs
NCBI-GeneID:
115171706
NCBI-ProteinID:
XP_029584627
Ensembl:
ENSSTUG00000040041
UniProt:
A0A674DI25
LinkDB
All DBs
Position
32:complement(31779055..31817079)
Genome browser
AA seq
923 aa
AA seq
DB search
MAKSNLQFKTNYAVSSTIEPFYKGGKVQISKDEKFIFCTCGTRVNVLQIVTGKIVHSIEQ
DDQEDITSFALSLDDEILVTASKALLLKQWDWKQAQCTRSWRAIHNVPIASMTFDPTSTL
LATGGCDGTIKLWDVVKQYCTHNLKGSSGVVHLVEFHPDISLLQLFSSASDCGIRMWDLR
SSQCLCVLQSHYSPVTSLAFTSDGASMVSSGRDKICTVWDLKSRTTRRTVPVYEAVESVV
LLPEDEDFSEIGVKTKEIHFITAGSKGVLRVWDASSARCVFAQTLPSAPPAGGSEEGGEE
YGDPRSLTYCLPLPSSLRLVTVTAEHNILLYQLPSFTTQQQFVGFNDEVLDVKFLGKGDT
HIVVATNSSQLKVFELATSSCKILYGHTDTVLSLDVFKKGSLFVSCAKDKSVRVWRQDPD
SGQVCCVAQGCSHGNAVGSITCSRMKESFVVSGSQDCTIKVWDLPETIPETDGDMFQLNA
RVTEKAHDKDVNSVAVSPNDKLLVSGSQDRLAKLWSLGAPGADLALLGVFRGHRRGVWCV
QFSPMDQVLASSSADGSVKLWSLQDFSCLKTFEGHDASVLKLIFVSRGTQLLTSGSDGLV
KLWTIKTNECVKTLDAHQDKVWGLHATRKDDRVVTASADSNITVWTDVTEVEQAEEQAKQ
EDQILKKQELSNLLHEKKFLKALGLAISLDQPHTVLKVIKAIRQGEDGAKQLEKTVLKLR
QDQKESMLRYCAVWNTNARSCLDAQAVIQVMLTHLSPEELLQYQGARAHLEGLIPYTERH
MQRIGRLLQASMFLDYMWQKMRVTGAPASMDSQDEEMDTASLQVPHSLFMIDKRPGEGGD
GTREQGDGEERWNEGEVEEDGGLEEDTNCPANMEDDDDEVSITRKASVRGQREENGQNGK
ENGNHRSGSEESSGEEDQGDQTG
NT seq
2772 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaagcaatctccagttcaagaccaactatgctgtttccagcactatcgaacca
ttctacaagggaggaaaagtacagatcagtaaagatgagaaatttatattttgtacgtgt
ggcacacgtgtcaacgtcttgcaaatcgtcacagggaagattgttcacagtattgaacag
gatgatcaggaggacattacatcattcgccctcagccttgatgatgagatcctggtaaca
gccagcaaggctctgctgctgaagcaatgggactggaagcaggcccagtgcacacgttcc
tggagggccatccacaacgtgcccattgccagcatgacctttgaccccacctccacgctc
ctggccacaggaggctgtgatggcaccataaagctgtgggacgtggtgaagcagtactgt
acacacaacctgaagggctcctctggggtcgtacacctggtggagttccacccagacata
agtctactgcagctcttctcctcggcgtcagactgtggcatcaggatgtgggacctgcgc
tccagccagtgtctgtgcgtgctgcagagccactacagccctgtcacctccctggccttc
acctccgatggagcctccatggtcagctctggcagggacaagatctgcacagtgtgggat
ctgaagagcaggactaccaggaggacagtgcccgtctatgaggctgtggagagtgttgtg
ctgctccctgaggacgaagatttctctgagatcggggtgaaaactaaagagatccacttc
atcacagcaggcagcaaaggtgtgctgagggtgtgggatgccagctcggcccgctgtgtg
ttcgcccagacgctcccctctgctccccccgcggggggctccgaggaggggggagaggag
tatggagacccccggagcctcacctactgcctccccctgccctcctccctcaggctggtc
acggtcacagcagaacataacatcctgctctaccagctgccctccttcaccacacagcaa
cagtttgttggcttcaatgatgaggtcctggatgtgaagtttctgggaaagggtgacact
cacattgtcgtggcgaccaacagctcccagctcaaggtttttgaactggccaccagcagc
tgtaagatcctctacggacacacagataccgtcctgtcactcgacgtgttcaagaaaggg
tccctgtttgtgagctgtgcaaaggataagtcagtgcgtgtgtggagacaggatccagac
agtggtcaggtgtgttgtgtggcccagggctgcagccatggtaacgctgtgggctccatc
acctgctccaggatgaaggagtcgtttgtggtgtctggtagtcaggactgcaccatcaag
gtgtgggatctcccagagaccatcccggaaacagacggtgacatgttccagctgaacgcc
cgggtcacagagaaggcacacgacaaagatgtgaacagcgtggcagtgtcccccaacgac
aagctcttggtgtctggttcccaggaccgcctggccaagctgtggtccctgggggccccc
ggggccgacctggcccttctgggggtgttccggggccaccgccggggggtctggtgtgtc
cagttctctcccatggaccaggtgctggcatcctcctcagccgacggctctgtcaagctc
tggagcctccaggacttcagctgcctcaagacgtttgaaggccacgatgcctctgtgctg
aagctcatctttgtgagcagagggactcagctactcacaagtgggtcagatgggctggtc
aagctgtggaccatcaagaccaatgagtgtgtgaagacgctggatgcccaccaggacaag
gtgtggggtctccacgccaccaggaaggacgaccgcgttgtcaccgcctcggccgactcc
aacatcactgtgtggacggacgtgacagaggtggagcaggcagaggagcaggcgaagcag
gaagaccagatactcaagaaacaggagctgtctaacctgcttcatgagaagaagttcctg
aaggctctgggcctggccatctccctggaccagccacacactgtgctcaaagtcattaaa
gcgatccgccagggggaagatggtgctaagcagctggagaagactgtgctgaagctgcgc
caggaccagaaagagtctatgctgcgctactgtgctgtgtggaacaccaacgcccggagc
tgtctggacgcccaggctgtgatccaggtgatgctcacacacctctcccctgaagagctg
ctccagtaccaaggagcacgcgcacacctggagggactcataccttacactgagagacac
atgcaaaggataggccgtctgctgcaggcctccatgttcctggactacatgtggcagaag
atgagagtgacaggagctccagccagtatggactcgcaggacgaggagatggacaccgcc
tctcttcaggtgccacactccctgttcatgattgacaagcgaccaggtgagggtggagat
gggactagggaacagggggatggagaggagagatggaatgagggagaggtggaggaggat
ggtggtctcgaggaagataccaactgcccggccaacatggaggatgatgatgatgaagtc
agtatcaccaggaaagcctcagtcaggggacaaagggaagaaaacggacagaatggaaaa
gaaaatggcaaccatcgctctggcagtgaggagagttcaggagaggaggaccagggagac
caaacaggctaa
DBGET
integrated database retrieval system