Salmo trutta (river trout): 115171804
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Entry
115171804 CDS
T08542
Name
(RefSeq) transcription factor Sox-9-A-like isoform X1
KO
K18435
transcription factor SOX9 (SOX group E)
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
stru03000
]
115171804
Transcription factors [BR:
stru03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
115171804
SSDB
Ortholog
Paralog
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Motif
Pfam:
HMG_box
Sox_N
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
115171804
NCBI-ProteinID:
XP_029584808
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All DBs
Position
32:complement(36313842..36318036)
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AA seq
490 aa
AA seq
DB search
MNLLDPFLKMTDEQEKCFSDAPSPSMSDDSVGSPCPSGSGSDTENTRPSDNHLLLGPDGV
LGEFKKADQDKFPVCIRDAVSQVLKGYDWTLVPMPVRVNGSSKNKPHVKRPMNAFMVWAQ
AARRKLADQYPHLHNAELSKTLGKLWRLLNEGEKRPFVEEAERLRVQHKKDHPDYKYQPR
RRKSVKNGQSEPEDGEQTHISSGDIFKALQQADSPASSMGEVHSPGEHSAGQSQGPPTPP
TTPKTDLAAVKADLKREGRPLQEGTGRQLNIDFRDVDIGELSSDVISNIEAFDVNEFDQY
LPPHGHPGMPGVNGAQTGYTSSYRGISASSIGQVGAGGHGWMSKQQQQHSISTLSGGGGI
GGEQGQSQGRTTQIKTEQLSPSHYSEQQGSPPQHVTYGSFNLQHYSASSYPSITRAQYDY
SDHQGGANSYYSHAGAQGSGLYSFSSYMSPSQRPMYTPIADPTGVPSVPTQTHSPQHWEQ
QPVYTQLSRP
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgaatctactcgaccccttcctgaagatgacagacgaacaggagaagtgtttctctgac
gctccaagccccagcatgtctgacgattcggtcggctcgccgtgcccgtccggctccggt
tccgacaccgagaataccaggccgtccgataatcatctcttactgggtccagacggcgtg
ctcggcgagttcaagaaggctgaccaagacaagttcccagtatgtatcagagatgcggtg
tctcaggtgctgaagggttacgactggaccttggtgcctatgcccgtccgagtgaacggc
tccagcaaaaacaagccccatgtcaagagacccatgaacgctttcatggtgtgggctcaa
gccgcccggaggaaactggcggaccagtacccacatctccacaatgcagaactcagcaaa
accctcgggaaactctggagattactcaacgaaggcgagaagcgtccgttcgtagaggag
gctgaacgcttgagggtgcagcacaagaaagatcaccccgactacaagtaccagcccaga
aggagaaaatccgtgaagaacgggcagagcgagccagaggacggcgagcaaacccacatc
tcttccggtgacatctttaaagctctccagcaagccgactcacccgcgtccagcatgggc
gaagtgcattctcccggtgaacattcagcaggccagtcccagggcccacctacaccaccg
accacccccaaaacagacctggctgcagtcaaggccgacctgaagcgtgagggccgcccc
ctgcaagagggcacgggccgccagctcaacatcgacttccgggacgtggatatcggcgag
ctgagcagcgacgtcatctccaacatcgaggccttcgatgtcaatgagttcgaccagtac
ctgccaccccacgggcaccccggcatgcctggcgtcaacggcgcccagacgggctacacg
agcagctaccgcggcatcagcgccagttccattggccaggtgggtgctggaggacatggc
tggatgtccaagcagcagcagcagcactccatctccaccctgagtggaggtggaggtatt
gggggagagcaaggccagagccaggggagaaccactcagataaagacggagcagctgagc
cccagccactacagtgagcagcagggctcccctccccagcatgtcacctatggttcattc
aacctgcagcactacagcgcctcatcctacccctccattacccgcgcccagtatgactat
tctgatcaccagggcggcgccaactcttattatagccatgcaggtgcccaaggctcaggg
ctctattccttcagcagctatatgagccccagccagaggcccatgtatacccccatcgcc
gaccccaccggagtgccctcggtgcccacccagacccacagtccacagcactgggagcag
cagcctgtctacacccagctctccaggccctga
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