Salmo trutta (river trout): 115171880
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Entry
115171880 CDS
T08542
Name
(RefSeq) FACT complex subunit SSRP1-like isoform X1
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
stru03000
]
115171880
03036 Chromosome and associated proteins [BR:
stru03036
]
115171880
Transcription factors [BR:
stru03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
115171880
Chromosome and associated proteins [BR:
stru03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
115171880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH1_SSRP1-like
Rttp106-like_middle
POB3_N
SSrecog
HMG_box
HMG_box_2
HMG_WDHD1
SSRP1_C
Motif
Other DBs
NCBI-GeneID:
115171880
NCBI-ProteinID:
XP_029584931
Ensembl:
ENSSTUG00000016721
LinkDB
All DBs
Position
3:28485645..28508882
Genome browser
AA seq
713 aa
AA seq
DB search
MGDTLEFNEIYHESKGSWNDGRLRFSKQNVVYKSSKTGKVDNIPAAELSVATWRRVCLGH
GIKLATSNGHVYKYDGFRDTDYERISEFFKANYKVELTEKDMCVKGWNWGTAKFSGPLLS
FDVNDSSVFEIPLASVSQCATGKNEVTLEFHQNDDAEVSLMEVRFYVPPGTADEGADPVE
AFAQNVRSKADVIQATGDAVCVFKELQCLTPRGRYDILIYPAFLHLHGKTFDYKIPYTTV
LRLFLLPSKDQRQMFFVISLDPPIKQGQTRYHFLILHFSKEEELKLTLNMSEEEVEKRYE
GKLSKNMSGSLYEMVSRVMKALVNRKITVPGNFQGNTPGAQCITCSYKAQSGLLYPLERG
FIYVHKPPVHLRFEEISSVNFARGTTTTRSFDFEVETKQGNQFTFSSIEREEYGKLFDFV
NAKKLHIKNRGFKEKKAKNNEYSDSDDDQHDAYLERMKAEGKIREEGDGSNDSDEETDES
FNPGEESDVAEEYDSNASESDSGSGGDGSDDEGKKKKPAKKAKVVKEKKERKPRREKKQK
DTNAPKRPMSSYMLWLNSSRERIKSENPGISITEISKKAGEMWKQIGKEDKEEWDGKAEE
AKKNYEKAMKEYRESGGGSSTPAMKESKKKAGGKKEDKKRKSGGGEKEKEQGGNDSFKSR
EFISSEESSSDGERKKAKKAKKAKGKPQSRGKESEEEEEEAMTTPPSSVEDSD
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atgggagacacgctggagttcaacgagatctaccatgaatccaaggggtcctggaacgac
ggtcgtctgcggttcagtaagcagaatgtggtgtataagagcagtaagaccgggaaggtg
gacaacatcccggcagcagagctgtctgtggccacatggaggcgtgtgtgtctgggacac
ggcatcaaactggcaaccagcaacggacacgtctacaaatatgacggcttcagagacacg
gattatgagaggatctcggagttcttcaaggccaactacaaggtggagctgacagagaag
gacatgtgtgtgaagggctggaactggggcactgctaaattctctggtccgttgttgtcg
tttgacgtgaatgacagctccgtgtttgagatccccctggccagcgtgtcccagtgtgcc
acagggaagaacgaggtgacgctggagttccaccagaacgatgacgctgaggtctctctc
atggaggtccgtttctacgtccccccaggcaccgcagacgagggggcagaccccgtggag
gcgtttgcccagaacgtgcggtctaaggcagatgtgatccaggctacaggagatgctgtg
tgtgtcttcaaagagctgcagtgcctcacacccaggggcaggtatgatatcctcatctac
cctgccttcctgcacctccatggtaagacgtttgactacaagatcccctacaccactgtg
ctgcgtctcttcctgctgccgagcaaggaccagaggcagatgttcttcgttatcagtctg
gacccgcccattaagcagggacagacgcgttaccacttcctcatcctgcacttctctaag
gaggaggagctcaagcttaccctcaacatgagcgaggaggaggtggagaagcgttatgaa
gggaagctcagtaagaacatgtcaggttctctctatgagatggtcagcagggtgatgaag
gctctggtcaataggaagatcaccgtgcccggaaacttccagggtaacacccctggagcc
cagtgtataacatgttcctacaaggcccagtccggcctgctctaccctctggagcggggc
ttcatctacgtccacaagcccccagttcacctgcgcttcgaggagatctccagtgtcaac
ttcgccagaggcaccaccacgacgcgctccttcgacttcgaggtggagaccaagcagggc
aaccagttcaccttcagcagcatagagagggaggagtacgggaagctgtttgactttgta
aacgccaagaaactccacatcaagaaccgaggattcaaggagaagaaggctaagaacaac
gagtacagtgactcagacgacgatcagcacgatgcctacctggagaggatgaaagccgag
ggcaagatcagagaggagggagacggcagcaacgactcagacgaagagaccgatgagtct
ttcaaccctggagaggagagtgatgtcgctgaggagtatgacagtaatgcgtcggagagc
gacagcggcagcggaggggatggcagcgatgatgagggaaagaagaagaaacctgcaaag
aaggccaaagtagtgaaagagaagaaggagaggaaaccacgcagagagaagaagcagaag
gacaccaacgcccccaagaggccgatgagttcctacatgctgtggctcaactccagccga
gagcgcatcaagtcggaaaaccccggaatctccatcacagagatctccaagaaggcagga
gagatgtggaaacagatagggaaggaggacaaagaggaatgggacgggaaggcagaggag
gctaaaaagaactatgagaaagccatgaaggaatacagagagagtggtggaggctcctcc
acaccagccatgaaggagagcaagaagaaggccggaggcaagaaggaggacaagaagagg
aagtctggtggaggagagaaagaaaaggagcaaggagggaacgacagctttaagagccga
gagtttatctccagcgaggagagttcatctgacggtgaacgcaagaaagccaagaaggcc
aagaaagccaaaggcaaaccccagagcaggggcaaggagtctgaggaggaagaagaggaa
gcgatgaccacaccccccagctctgtagaggactctgactga
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