Salmo trutta (river trout): 115172169 Help Entry 115172169         CDS       T08542                                  Symbol actn1 Name (RefSeq) alpha-actinin-1   KO K05699   actinin alpha 1/4 Organism stru  Salmo trutta (river trout) Pathway stru04510   Focal adhesion stru04517   IgSF CAM signaling stru04518   Integrin signaling stru04519   Cadherin signaling stru04520   Adherens junction stru04530   Tight junction stru04810   Regulation of actin cytoskeleton Brite KEGG Orthology (KO) [BR:stru00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04517 IgSF CAM signaling     115172169 (actn1)    04518 Integrin signaling     115172169 (actn1)    04519 Cadherin signaling     115172169 (actn1)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     115172169 (actn1)    04520 Adherens junction     115172169 (actn1)    04530 Tight junction     115172169 (actn1)   09142 Cell motility    04810 Regulation of actin cytoskeleton     115172169 (actn1)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:stru04131]     115172169 (actn1)   09183 Protein families: signaling and cellular processes    04812 Cytoskeleton proteins [BR:stru04812]     115172169 (actn1)    04147 Exosome [BR:stru04147]     115172169 (actn1) Membrane trafficking [BR:stru04131]  Exocytosis   Small GTPases and associated proteins    Rab associated proteins     115172169 (actn1) Cytoskeleton proteins [BR:stru04812]  Eukaryotic cytoskeleton proteins   Actin filaments / Microfilaments    Actin-binding proteins     Cross-linking proteins      115172169 (actn1) Exosome [BR:stru04147]  Exosomal proteins   Exosomal proteins of other body fluids (saliva and urine)    115172169 (actn1)   Exosomal proteins of colorectal cancer cells    115172169 (actn1)   Exosomal proteins of bladder cancer cells    115172169 (actn1) SSDB OrthologParalogGFIT Motif Pfam:  CH Spectrin EFhand_Ca_insen EF-hand_1 EF-hand_6 EF-hand_7 EF-hand_8 EF-hand_5 DUF6858 Motif Other DBs NCBI-GeneID:  115172169 NCBI-ProteinID:  XP_029585188 LinkDB All DBs Position 33:<40166151..40246700 Genome browser AA seq 586 aa AA seqDB search HVSSPPQTFTAWCNSHLRKAGTQIENIEEDFRDGLKLMLLLEVISGERLAKPERGKMRVH KISNVNKALHYITSKGVKLVSIGAEEIVDGNAKMTLGMIWTIILRFAIQDISVEETSAKE GLLLWCQRKTAPYKNVNIQNFHISWKDGLGFCALIHRHRPELIDYGKLRKDDPMTNLNTA FDVAEKYLDIPKMLDAEDIVGTARPDEKAIMTYVSSFYHAFSGAQKAETAANRICKVLAV NQENEQLMEDYEKLASDLLEWIRRTIPWLENRAPENTMLAMQQKLEDFRDYRRQHKPPKV QEKCQLEINFNTLQTKLRLSNRPAFMPSEGKMVSDVSNAWGGLEGAEKGYEEWLLNEIRR LERLDHLAEKFRQKAATHEAWTEGKEEMLRSLDFETASLSEIKALLKKHEAFESDLAAHQ DRVEQIAAIAQELKAGISQDQMNEFRASFNHFDRDHSGTLGAEEFKACLISLGFDIANDA QGEAEFSRIMSIVDPNRVGVVTFQAFIDFMSRETADTDTADQVMASFKVLAGDKNFIMAD ELRRELPPDQAEYCIARMAPYSGTDAVPGALDYMSFSTALYGESDL NT seq 1761 nt NT seq  +upstreamnt  +downstreamnt catgtgtcctctcctccccagacgttcacggcctggtgtaactcccacctgaggaaagca ggaacgcagatcgagaacatcgaggaggacttcagggacggactgaaactcatgctgctg ctagaggtcatatcaggtgaacgcttggccaaaccagagagggggaagatgagagtccac aagatctccaatgtcaacaaagctctccactacatcaccagtaaaggagtcaagctggtg tccatcggagctgaggagatcgtcgacggcaacgctaaaatgaccctgggaatgatctgg accataatccttcgcttcgccatccaggacatctctgtggaagaaacatcagctaaagag ggtcttcttctgtggtgccagaggaagactgctccttacaagaacgtcaacattcagaac tttcacattagctggaaagatgggttgggattctgtgctctcattcacagacaccgtcca gagctcattgactatggcaagctacgcaaggatgaccccatgaccaacctgaacacagcc tttgacgtggcagagaagtacctggacattcccaagatgttggacgctgaggacatcgtg ggcacggcccgtccggatgagaaggccatcatgacctacgtatctagcttctaccacgcc ttctctggtgctcaaaaggcggagacagcggccaataggatctgcaaggtgttggctgtc aaccaggagaatgagcagctgatggaggactacgagaagcttgctagtgatctcttggag tggatccgtcgcaccatcccctggctggagaaccgtgccccagagaacaccatgctggct atgcagcagaagctggaggacttcagggactatcgtcgccaacacaaaccccccaaggtc caggagaagtgccagctagagatcaacttcaacaccctgcagaccaagctgaggctgagc aacaggcctgccttcatgccctccgaggggaagatggtgtcggacgtctctaacgcctgg ggcggcctggagggggctgagaagggttatgaggagtggctcctcaacgagatacgtcgg ctggagagactcgaccacctggctgagaagtttcggcagaaagcagctacccacgaagcc tggactgaaggtaaggaggagatgctgcggtcgctggactttgagacggcctctttgtct gagatcaaggctctgctgaagaaacatgaggccttcgagagcgacctggccgcgcaccag gaccgcgtagagcagatagctgccatcgctcaggagctaaaggctggcatcagccaggac cagatgaacgagttcagagcctccttcaaccacttcgacagggaccactcgggcactctg ggggctgaggagttcaaggcctgcctgatcagtctgggcttcgatatcgccaacgatgca cagggtgaagcggagttctctcgcatcatgagcatcgtggatcccaaccgggtgggcgtg gtcacgttccaggcctttattgatttcatgtcccgagagacggccgatactgacaccgct gaccaggtcatggcctccttcaaggtcctggcaggggacaagaacttcatcatggctgat gagcttcgtcgtgagttgcctcctgatcaggcagagtactgcatcgcccgcatggcgccc tactctggcaccgacgccgtccccggcgccctggactacatgtccttctccaccgcactc tacggagagagtgacctctaa

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