Salmo trutta (river trout): 115172174
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Entry
115172174 CDS
T08542
Name
(RefSeq) protocadherin-10-like isoform X1
KO
K16499
protocadherin delta 2
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
stru04515
]
115172174
Cell adhesion molecules [BR:
stru04515
]
Cadherins
Protocadherins
115172174
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
115172174
NCBI-ProteinID:
XP_029585193
Ensembl:
ENSSTUG00000022302
UniProt:
A0A674A155
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Position
3:29242216..29258028
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AA seq
1014 aa
AA seq
DB search
MIVLFILLCITDGVVSQIRYSVPEEAGHGTFVGNIAEDLGLDMTKIASRRFQVVPSSRTP
YLEVNMENGILFINEKIDREQICKQSASCLLHLEVFLENPLELFRVEIEVVDINDNPPSF
PETDITVEISESAVPGTRFPLESAFDPDVGSNALRTYDITTNNYFYLDVQTQTDGNKFAE
LVLEKSLDREQQASHRYVLTAVDGGQPPRTGTALLVVKVLDSNDNVPVFDQPVYSVSLQE
NTPTGTLVIQLNATDLDEGQNGEIVYSFSNHISSRVKDLFAIDARTGRIEVRSEVDFEES
SLYQIFVQAKDLGPNAVAAHCKVLVKIMDVNDNAPDITFSTVTESVSERAAPGTVIALLS
VTDKDAEENGKIHVEILGDVPFKLKPSFRNYFTIVTDGPLNRENADSYSVTVVARDTGTP
SLATSKSIKVQVSDENDNAPTFTQPIYDVYVTENNVPGAYIHAVTALDPDVGQNALISYS
IMECDIQGMSVKTYVSINEETGYLYALRSFDYEQLKDFTFMVQAKDAGSPELFSNATVKV
IIVDQNDNPPSVIAPLGKNGTAREPLPRSAEPGYLVTRIIAMDADDGENARLSYSIQRGN
ENGMFRMDWRTGELRTARRVSTKRDPNQMYDLLIEVRDHGQPPLSSTASVFVVLVDSVVE
DHRERGTAKSKETSLDLTLILIIALGSVSFIFLLAMIVLAVRCQKDKKLNIYTCLTSDCC
LGCATCCSRHARARKKKLSKSDIMLVQSANVTGAGTAQVPVEESGSFGSHHQNQNYCYQV
CLTPESAKTDLMFLKPCSPSRSTDTEHNPCGAIVTGYTDQQPDIISNGSILSSETKHQRA
ELSYLVDRPRRVNSSAFQEADLVSSKDSGHGDSEQGDSDHDATNRGHSTGTDLFSNCTEE
CKALGHSDRCWMPSFVPSDGRQAADYRSNLHVPGMDSVPDTEVFESQEQTGDKSFSTFGK
ETPLSHHHQNHLHLSHHHATHANQAKLERKAFEALLSSTRAPYKPAYLTRKGVC
NT seq
3045 nt
NT seq
+upstream
nt +downstream
nt
atgattgtgctattcattttgctgtgtatcacggatggagtggtctcgcagatacgctac
tctgtgccggaggaggctggacacggcacgttcgtggggaatatcgccgaggacctggga
ctggacatgaccaaaatcgcctcacgccgcttccaggttgtgcccagctcgcggacgccg
tacctggaagtgaacatggagaacgggattctgttcatcaacgagaaaattgaccgggag
cagatctgcaagcagagtgccagctgtcttttacaccttgaagtgtttttggagaaccca
ctcgagctgttccgcgtggagatagaggtcgtggatatcaatgacaatccgcccagcttc
cccgaaaccgacatcacagtagaaatctcggagagcgcagtccccggtacccggtttccc
ctagagagcgcattcgatccggacgtgggttccaatgcgctgcgcacatacgacatcacc
accaataactacttctacttggatgtgcagacgcagaccgacggtaacaaattcgcagaa
ctggtgctagagaagtcgctggacagggagcagcaggcgtcccacaggtatgtgctgact
gccgtagacgggggccagccgccacggacaggcactgctctgctggtggtcaaagtgctg
gattctaacgacaacgtgcccgtgtttgaccagccagtgtactcagtgagtctgcaggag
aacacaccgacggggaccctcgttatccagctgaacgccaccgacttagacgaggggcag
aatggggagatagtgtattcattcagtaaccacatctccagccgcgtcaaggacctgttc
gccatagacgcgcgcactggacgcatcgaggtacgcagtgaggtggattttgaggagagc
agtttatatcaaatattcgttcaggcgaaagatctcggacccaatgccgtggccgcgcac
tgtaaagttctggtgaaaataatggacgtaaatgataatgctcctgatatcaccttcagc
acagtgaccgagtcggtgagtgaaagggcagccccgggcaccgttatagccctgctgagc
gtgactgacaaagatgctgaggaaaacggaaagattcacgttgaaatcctcggtgacgtc
ccgttcaaactcaaaccctcctttaggaactatttcaccattgtaacagatggaccccta
aatagagagaatgctgactcttattcagtgactgtagttgccagggatacagggacccct
tcccttgccaccagtaaatcaatcaaagtgcaagtgtcggatgaaaatgacaatgcgcca
acgtttacgcagcccatatatgatgtgtatgtgactgaaaacaatgtgccaggtgcttat
atccacgctgtgaccgctctggatccagacgttggacagaacgctctcattagttactcc
ataatggagtgcgatattcagggtatgtctgtgaaaacatacgtgtcaatcaacgaagag
accggctacctttacgcactcagatcattcgattacgagcagttaaaagacttcactttc
atggttcaggcgaaagatgcaggtagccctgagctcttctcgaacgccacggtcaaagta
atcatcgtggaccagaatgacaaccctccctcagtcattgctcctctgggtaaaaatggc
actgctagagagcctctgccccgctccgccgagcctggctacctagtaacccgtatcatc
gccatggatgcagacgacggagagaacgcacggctctcctacagcatccagcggggaaac
gagaacggcatgttccgcatggactggaggacaggagaattgcgcactgcccggcgcgtc
tccaccaagcgggacccaaaccagatgtatgacctgttgatagaggtgagggaccacggc
cagccgcccctctcctccaccgccagtgtgttcgtggtgctggtggacagtgtggtggag
gaccatcgggagaggggcaccgccaagtccaaggagacatcgctggacctcaccctcatc
ctcatcatcgccctgggctccgtctccttcatcttcctcctggctatgatcgtgctggcc
gtgcgctgtcagaaggacaaaaagctcaacatctacacgtgcctcaccagtgattgctgc
cttgggtgcgccacatgctgcagcaggcatgcgcgagcccgcaagaaaaagctcagcaag
tccgatataatgctggtgcagagcgccaacgtcaccggggccggtacagcccaggtgcca
gtggaagagtccgggagcttcggctctcaccaccaaaatcagaactattgctaccaggta
tgtctgactccggagtcggccaaaaccgacctaatgttcctaaagccgtgtagcccatct
aggagcacagacacggaacacaacccgtgcggggccatagtgacagggtacactgaccag
cagcctgacatcatatcaaacggcagcattttatcaagcgagaccaaacaccagcgagcc
gagctcagttacctggtggacagacctcggcgtgtgaacagttcggctttccaagaagcg
gatctcgtaagctctaaagacagtggtcatggtgacagcgagcaaggcgacagtgaccat
gacgccaccaatcgaggtcactctaccggcactgatctcttctctaactgcacggaggag
tgcaaggcactgggacactccgaccgctgttggatgccctcctttgtgccctccgacggg
cgccaggcggcagactaccgcagcaacctgcacgtgccaggcatggactccgtgcccgac
actgaggtatttgaaagccaagagcaaacgggcgataagtcattctccacctttggcaaa
gagacccccctcagccaccaccaccaaaaccacctccacctcagccaccaccatgccacc
cacgccaaccaagccaagttagagaggaaagcgtttgaggcacttctgtctagcacgcga
gcgccttacaaacctgcctatttgacgaggaaaggggtttgctag
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