Salmo trutta (river trout): 115172193
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Entry
115172193 CDS
T08542
Name
(RefSeq) protocadherin-18-like isoform X1
KO
K16499
protocadherin delta 2
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
stru04515
]
115172193
Cell adhesion molecules [BR:
stru04515
]
Cadherins
Protocadherins
115172193
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
PAG
Cadherin_C_2
Cupin_6
Ly49
Motif
Other DBs
NCBI-GeneID:
115172193
NCBI-ProteinID:
XP_029585220
Ensembl:
ENSSTUG00000022322
UniProt:
A0A673ZZE5
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Position
3:complement(29745165..29751861)
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AA seq
1172 aa
AA seq
DB search
MQRGSTPFLSVREEDGEITIGTKIDREKLCEKNLNCSIEFDVVTLPTEYLQLFHVEVEVL
DINDNSPQFSRAIIPIEISESASVGNRIPLDSATDPDVGDNSLYSYSLTPNNFFKIDIRT
RTDGAKYAELVVVKELDREVQSSYQLQLTASDNGVPPKSGSTLLKISISDSNDNSPAFDE
QVYVINLLENSPLGTLLVDLNATDPDEGTNGKIVYSFSSHISPKILEMFKMNPENGQITL
IKKVDYETTSSYELDIQAQDLGPNSIPGLCKTVIKVVDVNDNKPEININLMTPGKEEVAY
ISEGAPVDTFIALVRVDDSDAGLNGDVVCRLHGHGHFRLQKTYEKNYMILTNVSLDREKR
SEYSLTVIAEDRGSPSLSTIKHFTVQVLDENDNPPRFEKSRYEVYKSENNSPGAYLMTVV
ASDPDLGTNGQVTYTVLDTLVQGSPISTYVTIDPSNGAIYALRSFDHEDVSRISFTVQAR
DGGNPPLSSNATVLLTVLDDNDNPPVIQSPLLRNHTADLLLWRHASAGQLVTIVKATDRD
TGINSELSCSIIGGNEEGLFVMDARRCELRTNGSLEGVPKDVLEIRVEVQDRGTTRLSTG
ALLRLSLQENMDFLPPGLPTGPSHSLLDLSLIIIISLGAVCALLLVVMVMFATARCNREK
KEPHNSYNCRVAENTYQNHPKKPSRQIHKGDITLVPTVNGTLPVRAHSHSPSASPAPDRG
TMGSRQSHHSRQSLNSLVTISSNHVAENFALELAHATPPVEQVSQLLSMLHQGQYQPRPS
FRGNKYTRSYRYALNDMDKFSLKDSGRGDSEAGDSDYEAGRESPIDRLLGEAFNELYPHD
GQHRPHPQHPHAAMRLCTEECRVLGHSDQCWMPPLLSPASSDYRSNLFIPGEDPHQASDP
QEPPQPSDPDHPHAQRSNQSFSTFGKDNQEEAEEAEGGEEGEDEDLCGTTSLLSEMSSVF
QRLLPPSLDSYIQVSETQKAGTSMGGVGVPMTGSLDRRRGHLPGKPSAAAHQQGVAAWAA
NTHFQNPGSSIGPSGQPHHQNGSYHTLKPSTKLSPQNNHHNQAVPKNSPQNGHGHHAPTP
KNSPLLTALVSPTLVAPFLAPAPIPVPLPGPCGKWLPAMEEIPENFEEDEFDSVLGQLGH
LQGKRSDSRHELMDASELVAEINKLLQDVRQS
NT seq
3519 nt
NT seq
+upstream
nt +downstream
nt
atgcagagggggagcactccatttctgtccgttcgggaggaggacggtgaaatcaccata
gggaccaagattgaccgggagaagctttgtgaaaagaacctaaactgttctatcgaattt
gacgttgtcactctgcccactgaatacctccagcttttccacgtcgaggtggaagtctta
gacataaacgataactcgccacagttctcccgtgccatcatccccattgagatctccgag
agcgcgtctgtgggaaaccgcatccctctggacagcgccaccgaccctgacgtgggagat
aactccctttactcatactctctgacgccgaataactttttcaaaatcgacataaggacc
agaaccgacggtgccaaatacgcagagctggtggtggtgaaagagctggacagggaggtg
cagtccagctaccagctgcagctaacggcctcggacaatggagttcccccgaagtccggc
tccactctgctcaagataagcatctcagactctaacgacaacagtccggcttttgatgag
caggtgtacgttattaatctcctagaaaactcaccacttgggactctactggttgatttg
aacgccacagatccggatgagggcactaacggtaaaatagtttactctttcagcagtcat
atctctcccaaaatactggagatgtttaaaatgaaccctgaaaatggccaaatcactctg
attaaaaaagtggactatgaaactacgtcatcttatgagttggacattcaggcgcaggac
ctgggtcctaattccatcccaggactttgtaaaaccgtaatcaaagtggtggacgtgaac
gacaacaaaccggagatcaacattaacctgatgactcccggtaaggaggaagtggcctac
atctcggagggcgcgccggtggacaccttcatagcgttggtgcgcgtggacgacagtgac
gcagggctcaatggcgacgtggtgtgccgcctgcacggccatgggcacttccggctgcag
aagacctatgagaagaattacatgatcctgaccaacgtgtctctggacagagagaagagg
tcagagtacagtctgacggtcatagctgaggaccgcggctctccaagcctttccaccatc
aaacacttcactgtgcaggtgttggatgaaaacgataacccgccccgctttgagaagagt
cgctacgaggtttacaagtcagagaacaactctcccggggcctacctgatgacagtggtg
gcgtctgaccctgacctgggcaccaacggtcaggtgacctacacggtgttggacactctg
gtccagggaagccccatctccacctacgtcaccatcgacccatccaacggcgccatctat
gccctacggagcttcgaccacgaggacgtcagccgcatctccttcaccgtccaagcacgg
gacggagggaacccccccctatcctccaacgccaccgtcctcctgaccgtgctagacgac
aatgacaacccgcccgtcatccagtccccgctcctacgtaaccacaccgccgacctcctc
ctctggagacacgcctccgccggtcagctggtcacaattgtcaaggccactgaccgtgac
accggcatcaacagtgagctgagctgctccatcatcgggggcaacgaggagggcctgttt
gtgatggacgctcggcggtgcgagctgcggaccaacggcagtctggagggggttcccaag
gatgtgctggagatcagggtggaggtgcaggataggggcaccacccgcctgtccaccggg
gccctgctccgcctctccctccaggagaatatggacttcctacccccaggcctccccacg
ggccccagccattccctcctggacctctccctcatcatcatcatctccctgggggccgtg
tgtgccctgctgttggtggtcatggtgatgttcgccacagcacgctgcaacagagagaaa
aaggaaccccacaactcgtataactgcagggtggctgagaacacttaccagaaccacccc
aagaagccctctaggcagatccacaagggagacatcaccctggtccccaccgtcaacggc
accctgcccgtacgggcacactcacactcaccttctgcctcacccgccccagacaggggc
accatgggtagcaggcagagccaccacagccgccagtcgctcaacagcctggtcaccatc
tcctccaatcatgtcgcagagaacttcgctctggaactggcccacgccacgccccctgtc
gaacaagtctcacagcttctgtccatgctccatcagggccagtaccagccaagacccagt
ttccgtggcaacaaatacaccaggagctacaggtatgctctgaacgacatggataagttt
agtctgaaggacagtggtcgtggcgacagcgaggctggggacagtgactacgaggcagga
cgagagtctcccatcgacaggctcctgggtgaggcctttaatgagctataccctcatgac
ggccaacacagaccacatccacagcatccgcatgcagcgatgagactgtgcactgaggag
tgtcgtgtcctgggtcactctgaccagtgctggatgcctcccctgctctccccagcctcc
tctgactaccgcagcaacctcttcatcccaggagaggacccccaccaggccagcgatccc
caggagcccccccagccctctgaccccgaccaccctcacgcccaacgcagcaaccagagc
ttctccaccttcggcaaggacaaccaggaggaggccgaggaggcagaggggggagaggag
ggggaggacgaggacctgtgtggaaccacgtccctgttgtcagagatgagcagtgtgttt
cagaggctcctccccccatcgctggactcctatatccaggtcagcgagacacaaaaggca
ggtacgagtatggggggtgtaggtgtccccatgacagggtcactggacaggaggaggggt
catctgccaggtaagcccagtgctgccgcccaccagcaaggtgttgcagcatgggccgcc
aatacccacttccagaaccccggctctagcattgggccctcaggccaaccacaccaccag
aatggtagctaccacaccctcaaacccagcaccaagctcagcccccagaacaaccaccac
aaccaggccgtccctaaaaacagccctcagaatggacatggccaccatgcccccaccccc
aagaacagccctctcctcactgccctggtcagccccaccttggtggcacccttcctggcc
ccagcccccatccctgttcccctcccggggccatgcggtaagtggctcccagccatggag
gaaatcccagagaactttgaggaggatgagtttgactcggtgctggggcagctgggacac
ctgcaggggaagaggagcgacagccggcatgagttgatggacgccagcgagctggtggct
gagatcaacaaattgttacaggatgtccggcagagctag
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