Salmo trutta (river trout): 115172242
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Entry
115172242 CDS
T08542
Name
(RefSeq) syntaxin-binding protein 5-like isoform X1
KO
K08518
syntaxin-binding protein 5
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
stru04131
]
115172242
Membrane trafficking [BR:
stru04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
115172242
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
115172242
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LLGL
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
ANAPC4_WD40
WD40
Beta-prop_RIG_2nd
WD40_Prp19
Beta-prop_HPS5
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT140_1st
Beta-prop_TEP1_2nd
Beta-prop_WDR19_1st
Lgl_C
KNTC1_N
Synaptobrevin
WD40_like
PEP5_VPS11_N
CFAP43_N
RAB3GAP2_N
WDR54
Motif
Other DBs
NCBI-GeneID:
115172242
NCBI-ProteinID:
XP_029585334
Ensembl:
ENSSTUG00000034313
LinkDB
All DBs
Position
33:3778740..3830392
Genome browser
AA seq
1187 aa
AA seq
DB search
MKKFNIRKVLDGLASSSFSSASPQPGTSQNDVIQETLRSEHFQLCKTVRHGFPYQPSSMA
FDPVQKILAVGTQSGAVRLFGRAGVECYCQHESGAAVIQLQFLVNEGALVSALADDSVHL
WNLRQKQPAILHTLKFNRERITFCHLPFQSKWLYIGTEKGNIHIVNVESFTLSGYVIMWN
KAIELSSKSHPGPVVHISDNPMDEGKILIGFECGTVVLWDLKCKKADYRYNYDEAIHSVA
WHHEGKQFTCSHSDGTLTTWNVRVPAKPTITITPHGKQPKDGKKPEPCKPILKVEYKTTR
AGDAFMVMSGGLSYDTGCRRACLTVMHGKSTALLEMDYPIVDFLTLCETPYPNDFQDPYA
VVVLLENDLVVIDLRQIGYPIFENPYSLSIHKSPVTCVEYFADCPPELIPALYSVGSWQK
RPGYSKKEWPISGGNWGQGTLSYPEIIVTGHADGSIKFWDASAIMLQVLYKLKTAKVFEK
ALKGGKEEKPSTEIVDEDPYAIQTLSWCPESRMLCVAGVSAHVIIYRFSKQEITTEVVQL
LEVRMQCELDDVDSPDTAGEHPPTPSTPVHSSCPTQEGDPPETQPSTTDDGPRDNVPCLK
VRSSPLKQSPGYQVELVIQLVWVSGEPPQQITSLAVNSFYGLVAFGNSNGLAVVDYLQKI
LLLNMGTSELYSPSDPYQRQPRSPRKKRQPSGALSDNNNGNNALEEKSNKSPTSVGSTSP
TNSDDEHKQQRFIQKVKSKSRRFSKTVANDFAKMSRKICSPTEQKTDLEKRVRRQRSLPY
KKRFCCVKEGKEPRKSLSQQRTLSVPYLNAKDSLFSRSRSSSVTSIERESREAISSFHFS
ESFPRKSDSSGSPSLWVGTTQGTVLVLALSLPPTGDLRLQQPVRVSSCGTLVTLKGGILT
MAFLDSLGAVLPPSYEPWSEPNPPDEEKEKVRKRRPASPPPTQEGQDSQYAVVCSEKQAK
VVGLPSQSCFFKHNITEGSFVLRADVVQMTAGLCLACFCANGHIMALSLPSLRPLLDVNY
LPLTDMRIARTFCFSNLGQAMYLTSPTEIQRITYSQETCDNLQEMMGELFTPIETPEAPN
RGFFKGLFGGGAQSLDREDLFGETAAGKASRSLAQHIPGPQGMEGMKGAASGVVGDLARA
RIALDERGQKLGELEDRTAAMMASADSFSKHAHDMMLKYKDKKWYQL
NT seq
3564 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagttcaatattagaaaagtgctggacggcttggcttcttcttcattttcctct
gcatctccacaaccgggaactagtcaaaacgatgtgatccaagagacactacggtcggag
cattttcagctctgtaagactgtgcgccatggcttcccttaccagccctcctccatggcc
tttgaccctgtgcagaagattctggccgttgggactcagagcggagctgtgagacttttt
ggccgtgcgggtgtggagtgttactgtcaacatgagagtggtgcagctgtcattcagctc
cagttcctggtcaacgagggggcgctagtcagtgccttagctgatgacagcgttcatctg
tggaacctgaggcagaagcagccagctatcctgcacactctcaaattcaacagagagagg
atcacgttttgtcacctgcccttccagagtaaatggctgtacattggcacagagaaagga
aacatccacatcgtcaacgttgagtccttcacactctcaggctacgttatcatgtggaac
aaagccatcgaactgtcctccaagtcacaccctgggcctgtggtccacatcagtgataac
cctatggacgagggaaagattttgattggatttgaatgtgggactgttgtgttgtgggac
ctgaaatgcaaaaaagctgactaccgctacaattatgatgaggctatccactcagtagcc
tggcaccatgagggcaaacagttcacctgcagccactcagatggaactctgactacatgg
aacgtacgcgtccctgccaagcctacaatcaccatcacaccacacggtaagcagcccaag
gatggaaagaagccagaaccatgcaaacctatccttaaagtggagtacaaaacgacaaga
gctggggacgccttcatggtcatgtctggaggcctgtcctatgacacagggtgcaggaga
gcctgtctgacagtgatgcatgggaagagtaccgccctcctggagatggactatcccatc
gtagacttcctcacgctctgcgaaacaccatatccaaatgatttccaggatccttatgcc
gtagttgtccttttggaaaatgatttagttgtcatcgaccttagacaaattggataccca
atatttgagaacccgtactctctgtcgatccacaagtctccagtgacgtgcgtagaatat
tttgctgactgccctcctgaactcatacctgcactttactctgttggctcctggcaaaag
agacctggttacagtaagaaggaatggcccataagtggtggtaactggggccaaggcaca
ctaagctaccctgagatcatcgtcactggacatgctgatggatcaatcaagttttgggat
gcttctgcaataatgctccaagtactgtacaagctgaagactgccaaggtgtttgagaag
gctctaaagggcggtaaggaggagaagccgagcacggagatagtggatgaggatccctac
gccatccagaccttgtcgtggtgcccagagagcaggatgctgtgtgtggctggagtctct
gcccacgtcatcatctataggttcagcaaacaggaaataaccactgaggtggtgcagctg
ttggaggtgcgtatgcagtgtgagctggatgatgtggattctccagacactgcaggagag
catcctcccaccccatctaccccagtacactcctcctgcccaacccaggagggagacccc
cctgagacccagccctccacaactgatgacgggccccgggataatgtaccatgcctcaaa
gtccggagctcccctctgaagcagtctcctggttaccaggtggagctggtcattcagctg
gtctgggttagtggggagccgcctcagcagatcaccagcctggctgtcaactccttttac
ggacttgtggcgtttggcaacagcaatggtctggctgtagtggactaccttcagaagatc
ctcctcctgaacatgggcacgtcagagctgtacagtccctcagacccctaccagagacag
cctcggtcgcctcgcaagaaacgacagccatctggagctctcagtgataacaacaatgga
aacaacgctttagaagagaaaagcaacaaatccccaacgtcagtaggctctacgtcacct
accaattcagacgatgaacacaaacagcaaaggttcatacagaaggtgaagtccaaaagc
aggcggttttccaagacggttgccaatgactttgccaagatgtcaaggaaaatttgctcg
cctacagagcaaaagacagacctggagaagagggtgcgacgccagcgctctctcccgtat
aagaagcgcttttgttgtgtgaaggagggcaaggagcccaggaagtctctctcccaacaa
aggactctctcagtcccttacctcaatgccaaggacagtttgttcagccgctcgaggagc
tccagtgtgaccagtatagagcgggagtcccgcgaggccatctcctccttccacttcagt
gagagtttccccaggaagtccgacagcagtggcagtcccagcctgtgggtgggcactacc
cagggcactgttctggtcctggccctaagcctgccacccacaggggacctgaggcttcag
caacctgtcagagtatcatcttgtggtactctggtcacacttaaaggaggtatcctgacc
atggctttccttgactccctcggggcggtcctccccccttcctacgagccgtggtcggag
cccaaccctccggacgaggagaaggagaaggtgaggaagcgcaggccggcctctccaccc
cccacccaggagggtcaggacagccagtatgctgtggtgtgttcagagaaacaggccaag
gtggtgggcctaccctcccagtcctgcttcttcaaacacaacatcacagagggctccttt
gtgctgagagctgacgtggtgcagatgactgctggactctgcctcgcctgcttctgtgct
aatggacacatcatggctttgagtctacccagtctcagaccactcctggatgtgaactac
cttcccctgacagacatgaggatagcccggaccttctgcttctccaacctgggccaggcc
atgtacctcacctcccccaccgagatacagagaatcacatacagccaggagacctgcgac
aatctacaggaaatgatgggagagttgtttacaccgatagagacacctgaggctcctaac
agaggtttcttcaagggcctgtttgggggaggagctcagtccctggatagagaagacctg
tttggtgagacggcggcgggtaaggcgtctcgtagcctggcgcagcacattcctgggccc
cagggaatggagggcatgaagggggcagcctcgggagtggtgggggacctggcccgtgcc
cggatagccctggacgagagggggcagaaactgggcgagctggaggacagaaccgcagcc
atgatggccagcgctgactccttctctaaacacgctcatgatatgatgctgaagtacaaa
gataagaagtggtatcagctctga
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integrated database retrieval system
