Salmo trutta (river trout): 115172289
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Entry
115172289 CDS
T08542
Symbol
cdan1
Name
(RefSeq) codanin-1
KO
K19531
codanin-1
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
stru03036
]
115172289 (cdan1)
Chromosome and associated proteins [BR:
stru03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
115172289 (cdan1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Codanin-1_C
Motif
Other DBs
NCBI-GeneID:
115172289
NCBI-ProteinID:
XP_029585453
Ensembl:
ENSSTUG00000050071
LinkDB
All DBs
Position
33:5499408..5517669
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AA seq
1386 aa
AA seq
DB search
MAALLESLLQKEVETIKAVEWLKHDGDSDSLAWCKPLKIERQEFVPFLLNFLREQSCSAL
THGPATPAKTPSHPRVSQPSQQGPGFSSDRRGGCRSTGPGTGPRSASRVQLFSSTPSLSP
GAEWDTTHPPSGSHCLGGISALSSPSFSSARSPASASTSRHTPSERRSAQRASLGDFMLS
PPELQHQPHHSLSLGVQQQPRGRRRSAGMGGQGRQGGGRGVFQTEEVGPGRSEGGGRKGR
GGGANKMGDPAVSPPMAQMTTLVQLNLTNLEDFPPMGMSHASPPLHTKPSRRINPTPVSA
ERPHSRPKTCFTSTPFSTRPSSPPPVPEAVTGAIEGGITGALNVGSPPLSLQEERELLKR
VKCKRAQQVGSPRPTSLDPCTPTKSGLRSVSGSKMTPDTQGSCPDPSKVTLTSELDLLAD
LYCTCISENLVPNVFLELFFVLQLLTSRTPAVTEEEDKDLSMRKLDVLERGYLSKVHNCV
YFSVRVLENQFELVSHLDKDTLRLLAENERVTCFSPSLRNRLTLAQDASTAKVSPSVDTF
IHSVPFQPATDNRSNFSSDKAFHTFKKQRDIFYEVLREWEDFHKEPRWEFEAALGSRVRG
MVSQLNSTGNHSHFARLFLKQLVQMCKGPRALGSPGDTPDADLLGMLGADSLGRLKRLEE
RLIQPQGILGPCPPPAFPGHQEFFRDFLKTASCCQLNQHLKDSLCQQLLQLDEVSVLAPV
ASSTEGEGDMEQQDEKQRFSSVLLLARLLAKFLGYISFLPYQTSERPSREIQEATATLRS
KSMSVLDVCAVLRSCVRRRRTILTVPWLVEFLSMLDFTGPFLLCYRTVLGLLLGLYRRMV
LSREGEVCYLNQLLMVAVLGWLFQIPVIPEELFFSTDFTVDVELEESQTNVQGLDCLPLV
DQQLLYTCCPFLGEFRKLLAAFVAGSSARGGGLIRKITPTSAELRGTPIITRSQQKLQVD
LEQAFFHNQPPSLRRTVEFVAERVGSNCVKHMKVTLVSELVRGGERLLREGLISPGANPL
ILNDSICAQLCDGGQEALERATRFCSEKGPEAIRVLLPDETSPAVLTTSENITKRLATEK
ACSWLSSNITALVKREWKTKFDRVMKSLPSPEASGVEGSGSGLGAKAGAVAVTQEQSRTP
KRDMGKEEAGTSCPPDCPHSAPLPSDVLVEIKEVLSIAVGPRSEKEVLTCLQLNALLGKV
GDALSCKKFSFPMPEQMLIRCTVLLACKLVSGELPMVSPQEECGRTVSPGRTVSSGPVLP
DSPVQRVGCSIKVLLEQLILLWGRDCCSSAPLHLLFTEMTLSAVLMASDSQWDNFLFLVR
QLVERGILGEEEVVSHWRKLSQLPWPTEFIGKIQQQSSSTTSLPLPELQNHMDLLQVSPQ
PVEGAN
NT seq
4161 nt
NT seq
+upstream
nt +downstream
nt
atggcggctcttttggaatcgctgctgcagaaggaagtggaaactatcaaggccgtagaa
tggctaaaacacgacggggacagtgacagcttggcatggtgtaaaccactgaagattgag
agacaggagtttgttcctttcctgttgaacttcctgcgagagcagagctgctctgccctc
acccatggccctgccacacccgccaagacccccagccaccccagggtctcccagccctct
cagcaggggccaggcttctccagtgaccgtagggggggctgcagatctaccggacctgga
accggtcctcgtagcgccagccgtgtccagctattctcctccactccctccctgtcccct
ggggctgagtgggatactacccaccccccatctggctcccactgcctgggtgggatcagt
gccctgagtagtccttccttcagctcagccaggagccctgcttcagcctccacctccagg
cacactccctcagagcgccgctctgcccagagagccagtttgggggatttcatgctgtca
cctccagagctccagcaccaaccccaccacagtctcagcctgggggtccagcagcagccg
cgtggccgcaggaggagtgccgggatgggagggcagggaaggcagggtggggggcgtggt
gtgttccagactgaggaggtggggccaggaagatctgagggtggtgggaggaagggaagg
ggaggaggggctaataaaatgggtgacccagctgtgtcacctccaatggctcagatgaca
acgctggtccagctcaacttaaccaatctggaagacttcccacctatggggatgtcgcat
gcatcaccaccactgcatacaaaaccatctcggaggatcaacccaaccccagtcagtgcg
gagcggcctcactccagaccgaagacatgtttcacttccaccccgttcagcaccaggccc
tccagccctcccccagtcccagaggcagtcactggggccatcgaagggggcatcactggg
gccctgaacgtgggcagcccccctctcagtctgcaggaggagagagaactgctaaagaga
gtgaagtgtaaacgagcccagcaggtgggctcccctcgacccacctctttggacccctgt
acccctaccaaatcagggctccggtcggtatcaggctccaaaatgacccctgacacccag
gggtcgtgtcctgacccctctaaagtcaccttgacctctgaactggaccttctggctgac
ctctactgcacctgcatctctgagaacctggttcccaacgtgttcctggagctgttcttt
gtgctgcagcttctgacatctagaacaccagccgtcacagaggaagaagacaaggatcta
agtatgaggaagttagatgtcctggaaagaggttacctcagcaaggtgcacaactgtgtt
tacttctctgtcagggtgctggagaatcagtttgagttggtgtctcacctggataaagac
accctgcgtctcttggctgagaacgagagagtgacctgcttctctccatccctgaggaac
agactgaccctagcccaggacgccagcacagccaaggtctcgccctctgtggacaccttc
atccactctgtcccgttccagcctgccactgacaaccgctccaacttcagcagtgacaag
gccttccacaccttcaagaagcagagggatattttctacgaggtgctgcgagagtgggaa
gacttccacaaggaacctagatgggagtttgaagctgcactaggcagtagggtcagagga
atggtgagtcaactgaattccactggaaaccactcccatttcgccagactcttcctcaag
cagttggtgcagatgtgtaaaggtccccgtgctctgggctcccctggcgacacccccgac
gcggacctgctaggcatgctgggagcagacagcctggggcgtctaaagcgtctggaggag
cgtctgatccagccccaaggcattctgggaccctgtcctccacctgccttcccaggacac
caggagttcttcagggacttcttaaagaccgcaagctgctgccagctgaaccagcacctg
aaggacagtctgtgtcagcagctcctccagcttgacgaggtgtccgtcctggcccctgtg
gcctccagtacagagggagagggagacatggaacaacaagatgagaagcagcgtttctcc
tctgtcctgctgttggctcgtcttctagctaagttcctgggttatatctccttcctgccg
taccagacctctgagaggccctccagggagatacaggaggctactgccaccctccgcagc
aagagtatgtctgtgctggatgtgtgtgcggtcctgcgtagctgtgttcgtaggagacgg
accatcctgactgtaccctggctggtggagttcctctccatgctggacttcaccggtccc
ttcctcctctgctacaggaccgttctgggactgctgctcggcctatacaggcggatggtg
ctgtctagagaaggagaggtgtgttacctgaatcagcttctcatggtggctgtactgggc
tggctgttccagatcccagtgatcccggaggagcttttcttcagtactgatttcactgta
gatgttgagctagaggagagccagaccaacgtccagggacttgactgtctccccctggtg
gaccaacagctcctctacacctgctgtcctttcctgggtgagttccgtaagctcctcgct
gcctttgtggccggtagctctgccaggggtggaggcctcatccgtaagatcacccctacc
tctgctgagctgagaggaacccccattatcaccaggtcacagcaaaaactacaggtggat
ttggagcaagccttcttccataaccagcctccatcgctcagacgaacggtggagtttgta
gctgagagggtgggatccaactgtgtcaaacacatgaaggtcacgttggtgtctgagctg
gtccgtggtggagagcgattgctgagggaggggctgatctcaccaggggccaaccctctg
atactcaacgactccatctgtgctcagctctgtgacgggggtcaggaggctctggagaga
gctaccaggttttgcagtgagaagggtccagaagccatcagggttcttcttcctgacgag
acatctcccgctgttctcactacgtctgagaacatcaccaagcgcctggccactgagaag
gcctgtagctggctctcctccaacatcacagccctggtcaagcgagagtggaaaacaaag
tttgaccgtgtgatgaagtctcttcccagcccagaggctagtggtgtggaaggttctggc
tctggtcttggggctaaagctggagctgtagcagtcacccaggagcagtcacgtacccca
aaacgggacatgggcaaggaggaggctgggacgtcctgccctccagactgcccccacagt
gcaccactaccatctgatgtcctggtagagattaaggaggtgttgagtattgcagtaggc
cccaggtctgaaaaggaggtgctaacttgtctacagctgaatgctctactgggcaaagta
ggagacgcactgagctgcaaaaagttctcattcccaatgcctgaacagatgctgatacgc
tgcactgtcctgctagcctgtaaactagtttcaggggagctgcccatggtgtccccacag
gaggaatgtggtaggacagtgtctcctggtaggacagtgtcttctggtccagtactaccg
gactccccagtccaaagggtaggctgttcaatcaaagtcctgctggagcagttgatcctc
ctgtgggggagagactgttgttcatcagcccccctccacctgctcttcacagaaatgaca
ctcagtgctgtcctcatggccagcgactcacagtgggacaactttctgttcctggtcaga
cagctggtagagcgggggattctgggagaggaagaagtggtctctcattggaggaagctg
tcacagttaccctggccaacggaattcatagggaagatccagcagcagtcgtcttctacc
acgtcccttcctctgcctgagcttcagaaccacatggacttgttgcaggtctcaccacaa
cctgtagagggagccaactaa
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