Salmo trutta (river trout): 115172291
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Entry
115172291 CDS
T08542
Name
(RefSeq) spectrin beta chain, erythrocytic-like isoform X1
KO
K27409
spectrin beta, erythrocytic
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
stru04812
]
115172291
Cytoskeleton proteins [BR:
stru04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
115172291
Intermediate filaments
Intermediate filament-binding proteins
115172291
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
DYH2-5-8_CC
Ribonuc_L-PSP
Motif
Other DBs
NCBI-GeneID:
115172291
NCBI-ProteinID:
XP_029585455
Ensembl:
ENSSTUG00000050103
UniProt:
A0A674F0S6
LinkDB
All DBs
Position
33:5579272..5629654
Genome browser
AA seq
2374 aa
AA seq
DB search
MAAAMTSTTDFDNVEITQQYSRINTRFELLEEELDNDKSSVRLFERSRIKTLTDEREAVQ
KKTFTKWVNSILSRVNCRISDLYLDLRDGRMLIKLLELLSEEKLPKPTKGRMRIHCLENV
DKALQFLKEQRVHLENMGSHDIVDGNHRLILGLIWTIILRFQIQDIVVEMGQADGTQRES
RTAKDALLLWCQMKTAGYPNVNITNFTTSWKDGIAFNALIHKHRPDLVDYGGLKKSNPTH
NLQNAFNVAEQKLGVTKLLDPEDVFTENPDEKSIITYVVAFYHYFSKMKALAVEGKRVGK
VLDHAIETEKMIDKYETLSSDLLIWIEQTIIILNNRKLANSLTGVQQQLQAFNSYRTVEK
PPKFQEKGYLEMLLFTIQSRMRANNQRVYTPKDGALVADINRAWERLEREEHERERVLRD
ELIRQEKLEQMARRFDRKAAMRETWLLENQRLVAQDNFGYDLPAVEAAKKKHDAIETDIA
AYEERIQGIVAISKELQSERYHDAKRIDVRKENILRLRDYLLELLNARRARLDKNLTLQR
IFQEMLYIINWIDEMKTRLLSPDFGKHLLEVEDLLQKHALVEADIAVQAERVHNANAAAL
KFANGDSYKPCDPQVIKDRVQHLDLCYQELCALAVQRRARLEQSRRLWYFFWEMAELESW
IKEKEHIFSSLDYGKDLTSVLALQSKHSAFEDELGARRAHLQEIMNEGDKIIQAGHFDTP
QVEDRMQDVRRQWQQLEELAAFRRQNLQDTQRFFQFQGDADDLKAWLLDAKRQMTSDEVG
HDEYTTQRLLKRHRGLRDDVAKNGATIDALTKQAAALPEELRNTPDIQRRLKEIRDLYLE
LMSLCDLRQKKLDDAMALYIIFSETDACELWMGEKETWLVGLDVPEKLEDLEVVQNRLSI
LSSDMANVQSRVDDVNKAVKQLEDSRHPRTKEVKECQTRLNKRWEAFKAMLEERKRKVDS
ALSYHNYGLECDETESWIREKTRVIESTQELGNDLNAVMTIQRKLYGMERDLAAIGDKLT
FLRSEADQLAKDHPDNAADILARRAELDAAWDNLKATLKEREDSLGEVSKLQNFLQDMDD
FQSWLFKTQKAVASEDMPETLPQAEQLLSLHDAVHDDMGTHEEDYYKVRDTGVAVTQGQL
DDPQYQELDKRLKGLDRGWDELHKMWDSRKGFLDQGLGFQQFMRDAKQVETILNNQEYTL
AHTDKPDTLDGAEQALKKHEDFVCTMDANIERIASMLEGGQKLVDRGNLYSPRVQDKMDL
IHDRYHKNKGKANKVTGVLKDNRDLQHFLQNTQDLTLWINEKMLTAQDVSYDGDRNIHTK
WKKHQAFMAELSSNKDWMNKIDLEGQELMDAKPEFEPIVTERLAKLHELWDKLESTAEDK
ARLLFDANRSELFDQSLADIKKWLAELQKELQGDDEVKDLTNANILLKNHQQTENQVRDR
ARELEELQKAVEKHGGLAGSREGQLETEQQAIQMDFQQLLNPLSQRRGKLEAAKAVHQFY
RDLADEILWVEERLPLAMSDEHGNNLQVVQMLLKKNQMLQREIEGHQPRLDEVLERGRRM
ASAATEAGGLEAERIGQQVKELEEVWSRLQDEMAKRRDRLNGSNLAQQYYNDADEAEAWI
GEEELYMITDEKAKDERGAMLMLKRHLIMKEAVDDYSDSIQKLADRAQKMLNEDHPDGES
VIRRQGQVDKQYAGLKDLAEDRRRKLDHVYHHFLLSREVEDLEHLIAERDVVASSQEMGQ
DLDHVTLLRDKFRDFARETGTVGQERVDYVNQTIDELIEAGHTEASAMAEWKDSVNESWA
DLLELIDTRAQLLQASYDLLKYFDDGKELVAQIQEKHNEIPADLGEDFSKADTFHRMHAA
FERDISALGKQVQQFQETAVRLHAQYAGDQAVEIQTQEKEVVEAWKALLDACDGRRKRLE
ETADKFRFFTMVRDLMAWMESTIQQIETQEKPRDVSSVELLMKYHQGIMSEIDQRGPKFS
ECEEHGKALLARKHKDSVEISIKLSQQREKRKEMMIKWEDRWDWLRLLLEVCQFARDASV
AESWLVAQEPYVASKDLGQTVDEVEKLLKRHEAFEKSTATWEERFSALERLTTLELLELR
KQQQEMQQIVTEEQQRSQMESRREDTGFAEDSSQLYTIEEQTLPASGAVVEPSSGQLERT
AGDSTMPMLSEMQGAGLHEASSLELLDASVSGQTPREGEIRATTLPAEPLSAKAVLQEGM
LGRKHDLEAAGKKTSNRSWNNLYCVLKPGQLSVYKDAKSISHGSTYHGEDPLSLCNANCE
VLTNYKKKKHVFKLRLGDGSEYLFQCKEKKELDLWTQAMEKAVKPLAQEEVGPSGSAGAR
AHSLPPPPSSATPEPAKDKKDKERKGFSRFAKKK
NT seq
7125 nt
NT seq
+upstream
nt +downstream
nt
atggctgctgccatgacgtccaccacggactttgacaacgtggagatcactcagcagtat
agccgcatcaacacgcgcttcgagctgctggaagaggagctggacaatgacaagagctct
gtacgactgtttgagaggtcacgcatcaaaaccctaacagatgagcgcgaggcggtccag
aagaagaccttcactaaatgggtcaactccatcctgtcgcgggtcaactgccgtatctct
gacctgtacctggacctgagggatggacgtatgctcatcaaattactggagctcctctct
gaagagaagctgcccaagcccactaagggtcgtatgcgtatccactgcctggagaacgtg
gacaaggccctgcagttcctcaaggagcagagggtccacctggagaacatgggatcacac
gacatcgtcgacggcaaccaccgcctcatcctgggactcatctggaccatcatcctcaga
ttccagatccaagacattgtggtggagatgggacaggcagacgggacccaacgggagagc
cgcacagccaaggacgctctgctactctggtgccagatgaagactgctggatatccaaac
gtaaacatcaccaacttcaccaccagttggaaagatggcattgcgttcaatgctctcata
cacaaacacaggccagacctggtggactatggtggcctaaagaagtccaacccaacccat
aacctccagaatgccttcaacgtagcagagcagaagcttggcgtgaccaaactgttagac
cctgaagatgtattcacggagaacccagatgagaagtccatcatcacatatgttgtagca
ttctaccactacttctccaagatgaaggcactagcagtggaggggaagagagttggcaag
gtgctagaccatgccatagagacagagaagatgattgacaagtacgagaccctatcgtca
gacctgctgatatggatagagcagaccatcatcatcctgaacaaccgtaaactggccaac
tctctaaccggtgtccagcagcagctccaagctttcaactcctaccgcactgtggagaaa
ccacccaagttccaggagaaaggttaccttgagatgctgttgttcacaatccagagccgt
atgagagccaacaaccagagggtctacacccccaaggacggggctctagtggctgatatc
aacagggcctgggagcgcctggaacgggaggagcatgagagggagcgtgtcctgagagac
gagctgattcgtcaggagaagctggagcagatggccagacgctttgacaggaaagctgcc
atgagagagacctggctactggagaaccagagactggtggcacaggacaactttggctac
gacctgccggcggtggaagcggcgaaaaagaagcacgacgccatcgagacggacatcgct
gcctacgaggaacgcatccagggcatagtggctatctcgaaagagctgcagtctgagcgc
taccatgacgccaagcgcatcgacgtgcgcaaggaaaacatcctgaggctaagggattac
ctactggaactactgaatgctcgcagggcacgcctggacaagaacctcaccctgcagagg
atcttccaggagatgttgtacattatcaactggatcgatgagatgaagactcggctgctg
tctcctgactttgggaagcacctgttggaggtggaggacctgctccagaagcatgctctg
gtcgaggctgacatcgcagtgcaggcagagagagttcacaatgccaatgcagctgctctc
aagtttgccaatggagacagctacaagccctgtgacccccaggtgattaaggaccgggta
caacacctagacctgtgttaccaggagctgtgtgccctggcagtccagcgccgtgcccga
ctggagcagtcacgacgtctctggtacttcttctgggagatggccgagctggagagctgg
atcaaggagaaggagcacatcttctcctcgctggactacggcaaggacctgaccagtgtg
ctggctctgcagagcaaacacagtgccttcgaggacgagctgggggctcgccgtgcccac
ttgcaggagatcatgaacgaaggagacaagataatccaggctggacacttcgacacacca
caagtcgaggatcgcatgcaggacgtgaggaggcagtggcagcagttggaggagctggca
gcgttcagaaggcagaacctccaggacacccagaggttcttccagttccagggagacgct
gatgacctgaaggcctggctgctggatgccaagaggcagatgactagtgatgaagtgggt
catgatgagtataccacccagaggctgctgaagagacacagaggcctaagggacgacgtc
gccaagaacggagccaccattgacgctctgaccaaacaggcggcggcgctacccgaggag
ctgcgtaacacgccggacatccagagacgtctgaaggaaatcagagacctatacctggag
ctgatgtccctgtgcgacctgcgacagaagaagctggatgatgccatggccctgtacatc
atcttcagcgagacagacgcctgtgagctgtggatgggcgagaaggagacctggctggta
gggctggatgtgcctgagaaactagaggatttggaggtggtgcagaacaggttgagtata
ctttcttcagacatggctaacgtccagtcacgggttgatgatgtcaacaaagcagtgaag
cagcttgaggacagcagacaccctcgtaccaaagaggtgaaggaatgccagacgagactg
aataagaggtgggaggccttcaaggccatgcttgaggagaggaagcggaaggtggactct
gctctcagctaccacaactatggcctggagtgtgacgagacagagtcctggattcgagag
aaaacccgggtcatcgaatccacccaggaactgggcaacgatctgaacgctgtcatgacc
atccagaggaaactctatggtatggagcgcgacctggccgccatcggagacaagctcacc
ttcctgcggagtgaggcggaccagctggccaaggatcacccggacaacgctgcagacatc
ctggctagacgagccgagctggacgcagcctgggataacctgaaggccaccctgaaggaa
cgggaggactctctgggagaggtgtccaagctgcagaacttcctgcaggacatggatgac
ttccagtcctggctcttcaagacccagaaggctgtggcatccgaggatatgcctgagact
cttccccaagcagagcagctactgagcctccatgacgccgtgcatgatgacatgggcaca
catgaggaggactactacaaggtgagggacacgggcgtggcggtgacccagggccagctg
gatgaccctcaataccaggagttggacaagaggctgaagggtctggaccgcggctgggac
gagctccacaagatgtgggacagtaggaagggcttcctggaccagggcctgggcttccag
cagttcatgagggacgccaagcaggtggagaccatcctcaacaaccaggagtacactctg
gcccacacggacaagcctgacaccctggatggagcagagcaggccctgaagaagcacgag
gacttcgtctgcaccatggacgccaacatagagaggatcgccagcatgctggagggggga
cagaaattggttgacagggggaacctctactcccccagggtccaagataagatggatcta
atccatgacaggtaccacaagaacaaaggcaaagccaacaaggttacaggggtactcaag
gataaccgtgatcttcaacacttcctgcaaaacacacaggatctcactctgtggataaac
gagaagatgttgacggctcaggacgtgtcgtatgacggggacaggaacattcacaccaag
tggaagaagcatcaggccttcatggctgagctgtcctccaacaaagactggatgaacaaa
atagacctggagggtcaggagctgatggatgccaaacctgagttcgagcccatcgtgaca
gagcgtctggcgaagctgcatgagctgtgggacaagctagagtccactgccgaggacaag
gcccgtctgctgtttgatgctaaccgctccgagctttttgaccagagtctggccgacata
aagaagtggctggctgagcttcagaaggagctacagggagacgatgaggtcaaggacctc
acaaacgctaacatcctgctcaagaaccaccagcaaacagagaaccaggtgcgtgaccgt
gcgcgggagctggaagagctccagaaggctgtcgagaagcacggaggcttagccgggagc
agggagggccagcttgagactgagcagcaagctatccagatggacttccagcagctcctc
aaccccctgtcccagcgcaggggcaagctggaggcagccaaagccgtgcaccagttctac
agggacctggctgatgaaattctctgggtcgaggagaggttgccccttgcgatgtcagat
gaacatggcaacaatctccaagtggtccaaatgcttttgaagaagaaccagatgttacag
agagagatcgagggtcaccagccccggttggatgaggtgttggagcgtggccggaggatg
gcgtcggccgcgacagaggcgggcgggctggaggctgagcgtattggacagcaggtgaag
gagctggaggaggtgtggtctcggctgcaggatgagatggctaagaggagagacaggctg
aacggatctaacctggcccaacagtactataacgacgctgatgaagctgaggcctggata
ggagaggaggagctctacatgatcactgatgagaaagccaaggacgagcggggtgccatg
ttgatgttgaagcgtcacctgatcatgaaggaggctgtagatgactactcagactccatc
cagaagctggctgaccgcgcacagaagatgctcaacgaggaccaccctgatggtgagtct
gtcatccgtcgtcagggccaggtagataagcagtacgctggtctgaaggacctggcagag
gaccgcaggaggaagctggaccatgtctatcatcacttcctgctgagtcgagaggtggag
gatctggagcacttgatcgctgagagggatgtggtggcctcctcccaggagatgggacag
gacctggaccatgtcacgctcctgagggacaagttccgtgactttgcccgggagacaggg
acggtggggcaggagcgtgtggactatgtgaatcagaccatagacgaactgattgaggcg
ggccacacagaggcttctgccatggccgagtggaaggacagcgtcaatgagagctgggct
gacctgctggaactcatagacacccgcgctcagctcctacaagcctcatatgacctgctc
aagtacttcgatgatgggaaggagctggtggctcagatccaggagaaacataatgagatt
cctgctgacctgggagaagacttcagcaaggcagataccttccacaggatgcacgccgcc
ttcgagagggacatcagcgccctgggaaaacaggtgcagcaattccaggagacagcggtc
cgtctgcatgcccagtacgctggggaccaggctgtggagatccagacccaggagaaggag
gtggtggaggcctggaaagccttgctggatgcctgtgacggccgcaggaaacgcctggag
gagacagctgataagttccgcttcttcaccatggttcgagacctcatggcatggatggag
agcaccatacaacagatagagacacaggagaaaccacgggacgtgtcatcagtcgagctg
ctgatgaaataccaccaagggattatgtcagagatcgaccagcgtggacccaaattctct
gaatgtgaggagcacggcaaagctctgctggctcgcaaacacaaagactctgttgagata
agtattaagctgagccagcagagggagaagaggaaggaaatgatgatcaagtgggaggac
cggtgggactggctcaggctcttgttggaggtgtgccagtttgcacgggatgcctcagtg
gcggagtcgtggctagtggctcaggagccatacgtggccagcaaggacttgggacagacg
gtagacgaggtggagaaactgctgaagagacatgaagcctttgagaagtccaccgccacc
tgggaggagcgcttctcagcactggagagacttactacgttggagctgttggagttgagg
aagcagcagcaggagatgcagcagattgtaacagaggagcagcagcgctcacagatggag
agcaggagagaagacacagggttcgccgaggactcttctcagctctacaccattgaagag
cagacactgcctgcatctggagcagtggtggagccaagttcaggtcagttggagaggaca
gcaggtgactccacgatgcccatgctctctgagatgcagggtgctggcttgcatgaggct
agctctctggagctgctggatgcttctgtgtctggacagacccccagagagggggagatc
agggccactaccctgcccgctgaacccctcagtgctaaggctgtgctgcaagagggcatg
ctgggacgcaaacacgacctggaggctgctgggaagaagacttctaacaggtcctggaac
aacctgtactgtgtgctgaaacctggtcagctgtctgtctataaggacgccaagagcatc
agccatggctccacctaccacggagaggaccctctgtcgctctgcaacgccaactgtgaa
gtcctgaccaactacaagaagaagaagcacgtattcaaactgaggcttggagatggtagt
gagtacctgttccagtgtaaagaaaagaaggagctggatctttggacccaggcgatggag
aaggcagtgaagcccctggcgcaggaagaggtaggaccctcagggtccgcaggggcccgg
gcccacagcctgccccctcctccctcctccgccaccccagagccggcgaaagacaagaaa
gacaaggagaggaagggattcagtcggttcgcaaagaagaagtga
DBGET
integrated database retrieval system
