Salmo trutta (river trout): 115172334
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Entry
115172334 CDS
T08542
Symbol
tbpl2
Name
(RefSeq) TATA box-binding protein-like protein 2
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
stru
Salmo trutta (river trout)
Pathway
stru03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
115172334 (tbpl2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
stru03000
]
115172334 (tbpl2)
03021 Transcription machinery [BR:
stru03021
]
115172334 (tbpl2)
Transcription factors [BR:
stru03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
115172334 (tbpl2)
Transcription machinery [BR:
stru03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
115172334 (tbpl2)
RNA polymerase III system
TFIIIB
115172334 (tbpl2)
RNA polymerase I system
SL1/TIF-1B
115172334 (tbpl2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TBP
Zn_ribbon_PADR1
Motif
Other DBs
NCBI-GeneID:
115172334
NCBI-ProteinID:
XP_029585556
UniProt:
A0A674F7A0
LinkDB
All DBs
Position
33:8805487..8809673
Genome browser
AA seq
282 aa
AA seq
DB search
MDEDSALDDPIANVPGPPQLQDPSYLSSLSHPEKEVGKDLDLSCLPEETSGNAASNANVT
QDSGVFDAYRQEGSAETDPKKVAMLGASTFCPMTPVTPVAESSGIIPMLQNIVSTVNLAC
PLDLKSIVLQARNAEYNPKRFDAVIMRILEPRTTALIFSSGKMVCTGAKSEEKCRLASRK
YARVLQKLGFPAKFLDFKIHNMVGSCDVCFPIRLEGLLLDHQQFSSYVPELFPGLIYRMV
KPRIVLLIFVSGKVVLTGAKERREIYEAFENIYPILKGFRKQ
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atggatgaagattcagcattggatgacccaattgcaaatgtaccaggcccccctcagctt
caggacccgtcctacctctcctccttgagccatccggagaaggaggtcgggaaagatctg
gatctcagctgcttgccggaagagaccagtggaaatgctgcttctaatgctaacgtgaca
caagacagtggcgtcttcgatgcctataggcaagaggggtctgctgagactgaccctaaa
aaggtggccatgctgggagcctctaccttctgtcccatgacacccgtgaccccagtggct
gagagttctggaatcatccccatgttacagaatattgtatccacagtgaatctggcttgc
ccactggacctgaagtccattgttctacaagccagaaatgcagagtacaaccccaagcgt
tttgacgccgtcattatgcgaatactggagcctaggaccacagcgctcatcttcagctct
ggaaagatggtctgcacaggagccaagagtgaggagaagtgtcgcttagcttcccgcaag
tatgctcgagtgctgcagaagctgggctttcctgccaaattcctggacttcaagatccat
aacatggtagggagctgtgacgtctgcttccccattaggctggagggtctgttgctggat
catcagcagttcagcagttatgtgccagaactgtttcctggtttgatctatcgcatggtg
aaaccacgtattgtgttactgatctttgtgtctggaaaagtggttctgacaggagctaaa
gaacgtcgagaaatctatgaagcctttgagaacatataccccattctgaagggattcaga
aagcaatga
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