Salmo trutta (river trout): 115172469
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Entry
115172469 CDS
T08542
Symbol
gabrg1
Name
(RefSeq) gamma-aminobutyric acid receptor subunit gamma-1 isoform X1
KO
K05186
gamma-aminobutyric acid receptor subunit gamma
Organism
stru
Salmo trutta (river trout)
Pathway
stru04080
Neuroactive ligand-receptor interaction
stru04082
Neuroactive ligand signaling
stru04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
115172469 (gabrg1)
04082 Neuroactive ligand signaling
115172469 (gabrg1)
04519 Cadherin signaling
115172469 (gabrg1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
stru04040
]
115172469 (gabrg1)
Ion channels [BR:
stru04040
]
Ligand-gated channels
GABA-A
115172469 (gabrg1)
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Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
115172469
NCBI-ProteinID:
XP_029585798
UniProt:
A0A674CEA1
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Position
33:15869955..15883589
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AA seq
468 aa
AA seq
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MNSGISAICAMLLLQHVKGKAMNAWLLLALLGVCVASFGPSTKEDEDYEDVPINKTWVLS
PKVYESDVTLILNRLLQGYDNKLRPDIGVRPTVIETAVYVNSIGPVDPINMEYTIDIFFA
QTWYDSRLKFNSSMKVLMLNSNMVGKIWIPDTFFRNSRKSDAHWITTPNRLLRLWNNGRV
MYTLRLTINAECYLKLHNFPMDEHSCPLEFSSYGYPKNEILYRWQKRSVEVADQRYWRLY
QFAFVGLRNTSDVAHTQSGEYVILTIFFDLSRRMGYFTIQTYIPCSMIVVLSWVSFWINK
DAVPARTSLGITTVLTMTTLSTISRKSLPKVSYVTAMDLFVSVCFIFTFAALMEYGTLHY
FTSNRQSKKDTDKKPQKSSSLVNIRPGTSLLQMNNIAPYQDEDDYAYECLDGKDCTSFFC
CFDDCRSGAWRENRMHVRVSKIDSYSRIFFPTAFGLFNLVYWIGYLYL
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgaacagtgggatttccgcaatatgtgccatgcttctgctgcaacatgtcaaaggcaaa
gcgatgaatgcgtggctgttgctagctcttctcggagtctgtgtggcgtcatttgggccc
agtacaaaggaggatgaggactatgaagacgtccccataaataagacctgggttttatcg
cccaaggtctatgagagcgatgtcaccttgatcttaaatagattgctgcagggctatgac
aacaaactccgacctgacattggagtaaggccaacagtgattgagacagcggtgtatgtc
aacagcatcggaccagtcgatcctattaacatggagtacaccatagacatcttctttgcc
cagacgtggtatgacagtcgccttaagttcaacagctccatgaaagtcctgatgctcaac
agtaacatggtgggaaagatctggattcctgacaccttcttccggaattctagaaagtct
gacgcccactggatcaccactccgaaccgtctgctgcgactgtggaacaacgggagagtg
atgtacacgctgaggttgactattaatgcggaatgctaccttaagctgcataactttcct
atggacgagcactcgtgtccgctggagttttcgagctatggctatcctaaaaatgagatt
ctgtaccgttggcaaaagcgttctgtggaagtggccgaccaaaggtactggagactctac
cagtttgcgttcgtcggtttacgaaacacatcagatgtggcgcatacacaatcaggtgaa
tatgtcatcttgacaatcttttttgacctgagtcggcgaatgggctacttcactattcag
acgtacatcccctgcagcatgattgtggtgctgtcatgggtctctttctggatcaataaa
gatgctgtccctgccaggacctccttaggaatcaccacggtgcttaccatgacaacgctg
agcaccatctccaggaagtcgcttcccaaggtatcctatgtgacggccatggacctgttt
gtgtctgtctgcttcatcttcacgtttgctgctctgatggaatatgggactctacactac
ttcaccagcaataggcagagcaagaaggatacggacaaaaaaccacagaaatccagcagc
ttggtgaacattaggccagggacgtcactgctccagatgaataacatcgccccctaccaa
gacgaggatgattacgcctacgagtgtctggatgggaaggactgcaccagcttcttctgc
tgcttcgacgactgtcgctccggagcatggcgcgaaaaccggatgcatgtccgagtttca
aagatcgattcctactcacgaatattcttccccaccgccttcggccttttcaacctggtc
tactggatcgggtatctgtacttataa
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