Salmo trutta (river trout): 115172567
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Entry
115172567 CDS
T08542
Symbol
ubr1
Name
(RefSeq) E3 ubiquitin-protein ligase UBR1
KO
K10625
E3 ubiquitin-protein ligase UBR1 [EC:
2.3.2.27
]
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
stru04121
]
115172567 (ubr1)
Enzymes [BR:
stru01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
115172567 (ubr1)
Ubiquitin system [BR:
stru04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
UBR box proteins
115172567 (ubr1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRT6_C
WHD_UBR1
zf-UBR
ClpS
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
115172567
NCBI-ProteinID:
XP_029585983
Ensembl:
ENSSTUG00000014511
LinkDB
All DBs
Position
33:18463221..18498767
Genome browser
AA seq
1738 aa
AA seq
DB search
MAEGETSLNGLELSKRWRDAADCGAEMLCFVVEQVPQIYCLEVESNSQEEEEVVQSRLLQ
PLEWFLFGEDPQAGLEKLQQGSASSQLCGRVFKEGETVYSCRDCAIDPTCVLCMDCFQDS
VHKGHRYKMHASSGGGFCDCGDLEAWKTGPCCSKHDPGAATAMETDECVLEPGLHERAQK
LFQVLLRYATDLLVWEESYELAAELQPRVKEDTYYCVLYNDEHHSYDHVIYTLQRSVQCD
HSEAHTHTALIDKEGRRAVKRGKLRSCQQAKDLIRSHSEHISLQPLRVEILHSAVMAHQS
FAMRLGAWFQQIIGYSVGFRQVFCQVALEPSSEGDQPSLISRLMLHDSRLYKGARKFIHE
LIFCSLLMETEYKRRFAIEFTKHYKQLQKDYTLDDHERSISITALSVQIFTVPTLARQLI
EEGNVIKVIVDTVMELLSEHLDANHRFHFQGYNSDKFFRIQVIFHDLRYILISKPSVWTE
ELRTQFLEGFRVFLGLLHCMQGMEEVKRQFGQHIEVEPEWEAGFSIQRQLRHILVMFQDW
CSSDETVLLLSFRECHRALMRCNNQPFQSEATDYYMCKHILHVSPYKVSQEPVSIHLPIS
RALAGLYVQLCYTGAVKRLHEFLDPESCDFTWFAEHPLRCVVLAAQVSAEMWRRNGLSLV
SQVYYYHDVKCRDEMFDKDVIMLQIAASKMDPNHFIMLILQRFELFDVFNGSLASKDQEL
LKQWNRLTEEMLYLLIIIVGERYVPGISHVTKEDVTMREVIHLLCIQPMAHSSLVKGLPE
NESHETGLETVIPKVATFKKPGVSGHGLYEVKKECLPEFNPFFFHYSKSQHSKAEDAQKK
RRTQEGSDKALRPPVPPPFCPAFSSIVHLLCCDILIHILRRVLQRAVEDRATYWTEAMIQ
RSLHLIGQGLLEEKAQLGASTVEQVTFDFSLKARTIGSEHRKSVFHLLSKMTALPSLEAQ
KDMIKWTLQMFEMVKCLREKSSPAASMSVEQTKPEEIVPDKDKAERKRKAEAAKLHRQKI
MAQMSAMQKNFIESHKMLYDNMPESSQGEPVASRESCAMELGELCVAVGPQRGSTPAERE
VLTCILCQEEQEVQARSPAMVLTACVQRSTVLTQCRGKTLANNETMYPLFMPPDLAVGTH
TGSCGHVMHATCWQKYFEAVQNTTRNRLHAELIIDLENGEYMCPLCKSLCNTVVPLIPLE
PLTLNYENAELVGQLLTLPRWIQILSARIKGLKSVAQGPESSSETISDGDTALCGEGQPD
FRSILSFGVKEPRKYSDSIAEMLVVCATTVHRVGLQTGPNELCPAVPVMSWNTCAFTIQA
IENLLQEEDKTLFGSLQNRQLAGLKAVVQFSATQRLKSSQAVIQKHFTDMLGALLPTMSS
ESTPSILEVDFFHLLVGLVLAIPALYQEEAVDLQPSAVSSAYNHLYILHLVTMAHMVQVL
LSSTDDTAVFGGEEGEAERAAAELYAAVSQCTGGLRSDVSGSSVADRVRRGVTPFLRCAA
LFFNCLTGVPPPEELSSTTVTSQGQMEALCSYLALPCDVFQLFQEHRGTVFPLLQRWCGH
PAVTKALKGEMQTISYPRKRNRLIELPEDYSALLNQASHFQCPNSTDDERKHPTLCLFCG
TILCSQSTCCHSQLDGEEVGACTAHAATCGAGVGMFLRIRECEMVLMASKTRGSTYPAPY
LDDYGETDPQLGRGNPLHLCPERYRKLHQLWQQHCILEEIARSLEVVNVMFAFEWQML
NT seq
5217 nt
NT seq
+upstream
nt +downstream
nt
atggcggaaggtgaaacatcgttaaacggactggagctcagtaagagatggcgggatgct
gcggactgcggggcagagatgctctgcttcgtggtggagcaggtgccacagatctactgc
ctggaggtggagtccaactctcaggaggaggaggaagtggtgcagagccgtcttctgcag
ccactggagtggttcctgttcggggaggaccctcaggccggcctggagaagctccagcag
ggcagtgcctcctcacagctttgtggacgtgtcttcaaggagggggagactgtctactcc
tgcagggactgtgcgatagatcccacatgcgtactgtgcatggactgcttccaggacagt
gtgcacaagggccatcgttataaaatgcacgcttcatcaggaggggggttctgtgactgt
ggggatctggaggcctggaagactgggccctgctgctccaaacacgacccaggggctgcc
actgccatggaaacggatgagtgtgtgttagagcctggtttacatgagcgtgcccagaag
ctcttccaggttctcctgcgctacgctacagatctgctggtgtgggaggagagctatgag
ctagcagcagaactgcagcccagggtgaaggaggacacatactactgtgtactgtacaac
gatgagcaccactcatatgatcatgtgatctacaccctgcagcgctctgttcagtgtgac
cacagtgaggcacatactcacacagccctcattgacaaagagggtcgcagggcagtgaag
cgagggaagctccggtcttgccaacaagccaaggacctcatcaggtcccactcggagcac
atctccctgcagccccttcgtgtggagatcctccactctgcggtcatggcccaccagagc
tttgccatgcgactgggcgcctggtttcagcagatcatcggctactcagtggggttcagg
caggtgttctgccaggtggctctggagcccagctcagagggggaccagcccagcctcatc
agccgactcatgctgcatgactccaggctgtacaaaggagcccgcaagttcatccatgag
ttgatcttctgtagcctgctgatggagaccgagtacaagaggcgctttgccattgagttc
accaagcattacaaacaactgcagaaggactacacacttgatgaccatgagaggagcata
tccattacagctctatctgtgcagatcttcaccgtacccactctggccaggcagctgatt
gaggaagggaatgtgatcaaggtgatcgttgacaccgtcatggagctgctgtcggagcac
ctggatgccaaccatcgcttccacttccaggggtacaactcagacaagttcttccggatc
caggtgatcttccacgacctcaggtacattctgatcagcaagccctctgtgtggactgag
gagctgaggacccagttcctggaggggttcagggtcttcctggggctcctccactgcatg
cagggtatggaggaggtgaagcggcagtttggtcagcacatcgaggtcgagcctgaatgg
gaggctgggttttctatacagagacagctacgacacatcctcgtcatgttccaggactgg
tgttcatctgatgagactgttctcctcctgtccttcagggagtgccacagggcgctgatg
cgctgcaataaccaaccctttcaaagcgaggccacagactactacatgtgtaaacacatc
ctccatgtcagcccatacaaggtgtcccaggagcctgtcagcatacacctgcccatctcc
agggcgctcgctggcctgtatgtacagctgtgttatacaggggcagtcaaacgcctccac
gaattcctggatccagagagctgtgacttcacctggtttgcggagcaccctctgcgctgt
gtggtgctggctgcccaagtctcagctgagatgtggcgcaggaacggcctctcgctcgtc
agccaggtgtattattaccatgacgtaaaatgcagggatgagatgtttgacaaggatgtc
atcatgctacagatcgctgcttccaaaatggaccccaaccacttcattatgctgatcttg
cagagatttgagctctttgatgtgttcaatggaagtctcgcaagcaaagaccaagaactg
ctgaaacagtggaaccggttaacagaagagatgctctacctcctcatcatcattgttggg
gagcggtatgtcccagggatcagtcacgtgaccaaagaggatgtgactatgagggaggtg
atccacctgctgtgtattcagcccatggctcacagcagcctggtcaagggcctgccagag
aacgagagccatgaaactggcctggaaactgtcattccaaaagttgccaccttcaagaag
ccaggtgtttccggacacggcttgtatgaggtgaaaaaggagtgcctgccggaattcaat
cccttcttctttcactattctaaatctcagcatagcaaggcagaagatgctcagaagaag
agaagaactcaggagggcagtgacaaagccctgcgtccccctgtcccccctcccttttgc
ccagccttctccagcatagtgcatctgctgtgttgtgacatcctcatccacatcctcaga
cgagtactgcagagagctgtggaggaccgggccacctactggacagaggccatgatccag
aggtccctgcaccttataggccagggtctgttggaggagaaggcccagttgggagccagc
actgtggagcaggtcacctttgacttcagcctcaaagctcgcacgattggctccgagcat
cgcaaatctgtgttccacctcctgtccaagatgacggctcttccttccttggaagcccag
aaggatatgattaagtggacactgcagatgtttgagatggtgaagtgccttagggagaag
tccagtccagcagcctctatgagcgtggagcagaccaagccagaagagatcgtccctgac
aaagacaaagccgagcggaagaggaaagcggaggcagccaagctccatcggcagaagatc
atggcccagatgtcggccatgcagaagaacttcattgagtcacacaagatgctgtatgac
aacatgccagagagttcccagggggagcctgtggcctccagagagagctgtgccatggag
ctgggagagttgtgcgtggctgtggggcctcaacggggctccaccccggctgagagggag
gtgctgacctgcatactatgtcaggaggagcaggaggtccaggcccgctctccagccatg
gtgctgaccgcctgtgtccagaggtccaccgtgctgacacagtgccgggggaagactctg
gccaacaatgagaccatgtaccccctcttcatgccacctgacctggctgtggggactcac
actggcagctgtggccatgtcatgcacgctacctgctggcagaagtactttgaggcagtc
cagaacaccactcggaaccggctccatgctgagctcatcattgacctggagaacggggag
tacatgtgcccgctctgcaagtccctgtgcaacactgttgttcctctcatccccttggaa
ccactcacacttaactatgagaatgcagagctggtgggacagctcctcaccctccctcgc
tggatccagatcctctctgccaggatcaaaggactcaagtctgtcgctcagggaccagaa
agcagcagtgagactatcagtgacggagacactgccctctgcggggaaggccagccagac
ttccgctctatcctcagctttggagtaaaagagccgaggaagtactctgacagcatagcg
gagatgctggtggtgtgtgccaccacggtgcacagggtggggctgcagacggggcctaac
gagctgtgtcccgccgtgcccgtcatgtcctggaacacctgtgccttcaccatccaggcc
attgagaacttgctacaggaagaggataagacactgtttggctctttacaaaacagacag
cttgcgggcctgaaggctgtggttcagttttctgcaacccaacgcctcaagagctcccag
gctgtcattcagaagcatttcacagacatgttaggagccttgttacccaccatgagttca
gagagcacaccttctattctggaagtagacttcttccaccttctggtggggctggtgctt
gccattccagctctctaccaggaggaggcggtagacctgcaaccctctgctgtcagctct
gcctacaaccacctttacatcctgcacctggtcaccatggcacacatggtgcaggtcctc
ctctcctccacagatgacacagcagtgtttgggggagaggagggagaggcggagagggca
gcagcagagctctatgctgctgtgtcacagtgtaccggcgggctgaggtcagacgtgtct
ggcagctcagtggcagacagagtgaggagaggggtcacgcccttcctgcgctgcgcagcc
cttttcttcaattgccttacaggggtgccccctccagaggagctctccagtactacagtt
acatctcaaggccagatggaggcactgtgcagttatctggcattgccctgcgatgtgttc
cagctcttccaggagcaccgtgggactgtctttcccttattacagagatggtgtgggcac
ccagctgtaaccaaagccctaaaaggggaaatgcagacaatcagttatcccaggaaaagg
aatcggttaattgagcttcctgaggattacagtgcgctcctcaatcaagccagtcacttt
cagtgtcctaactccacagacgatgagaggaagcaccccaccctgtgcctcttctgtggg
accatcttgtgctcccagagcacctgctgtcatagccagcttgacggggaggaggtgggc
gcctgcaccgcacacgctgccacctgtggggctggagtgggcatgttcctcaggataaga
gagtgtgagatggtcctgatggccagtaagacacgaggaagcacctacccagccccttat
cttgatgactacggagagactgacccacagctagggagggggaaccccctgcacctgtgc
cctgagaggtaccggaagctccaccagctgtggcagcagcactgtatcctggaggagatc
gcccgtagcctggaggtggtcaacgtcatgtttgctttcgaatggcagatgctgtga
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integrated database retrieval system
