Salmo trutta (river trout): 115172878
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Entry
115172878 CDS
T08542
Name
(RefSeq) platelet-activating factor receptor-like isoform X1
KO
K04279
platelet-activating factor receptor
Organism
stru
Salmo trutta (river trout)
Pathway
stru04020
Calcium signaling pathway
stru04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
115172878
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
115172878
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
stru04030
]
115172878
G protein-coupled receptors [BR:
stru04030
]
Rhodopsin family
Others
Platelet activating factor
115172878
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Ortholog
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Motif
Pfam:
7tm_1
7TM_GPCR_Srv
7TM_GPCR_Srx
PEN-2
Bac_export_2
DUF3382
Motif
Other DBs
NCBI-GeneID:
115172878
NCBI-ProteinID:
XP_029586563
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Position
33:33753436..33770560
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AA seq
473 aa
AA seq
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MFPSLCRWFSPDIMGVSFSTWWTWRGMVQRCAVGFRWPTSWSPTLSGISISSVQTGPWGC
PPGHVILRLEPRIGGCTVTTMRGSERELLALAEPTVESTMAMEEDMTVNTTVKISTVGNI
TFLDSDFRYTLFPVFYGVVFALGLIANSYVLFVLQRLRNAKAMSEIRIYMTNLTVADLLF
VCALPFWIGYYHHRGDWRYGDFLCRVTGAFFFINTYCSILFLAAISVNRYWAITRPLDAA
SSDHWRRGVAVSMVIWVLTLSMSMPYLLETGIQVDGGNVSRCFEGYHDKTDDEKRTVATT
HLIIVGCFVLVFFLVVVCNLLIARALLAQSPTQTRGSSSSQLRGVKGQALQMLCAVVGVF
VVCFLPHHVVQGPWTLAVLEIKEGWGRMDWGQRTRQRLNDAHQVTLMLMGLNCLLDPVVY
CFATRKFRLYIKNNLKKVGRGKRCSETAITHISMVEGKNVSQRLHSEQQQLKV
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgtttccctccttatgccggtggttctctcccgacataatgggagtcagcttcagtacc
tggtggacttggaggggtatggtccagaggtgcgctgttgggttccggtggccgacatcc
tggtccccaacattgtccgggatttccatctcctccgtccagactggcccttggggctgt
cctcctggccacgtcatcctgcggctggagccacgcattggggggtgtactgtcacgacc
atgaggggctctgagagggagttgcttgctttagcagaaccaacagtggagtcgaccatg
gcgatggaagaggacatgacagtgaacacgacagtgaaaatatcgacagtcggtaatata
acctttctggactctgacttccgctacaccctcttcccagtgttttacggtgttgtgttc
gcccttggtctgatagccaacagttacgtgctgttcgtgctgcagcgcctgcgcaacgcc
aaggccatgagcgagatccgcatctacatgaccaacctgactgtggccgacctcctcttt
gtgtgcgccctccccttctggattggctactaccaccaccgcggtgactggcgctacggc
gacttcctgtgccgcgtcaccggcgcgttcttcttcatcaacacctactgctccatcctc
ttcctcgccgccatcagcgtcaaccgttactgggccatcacgcgcccgcttgatgccgcc
tcgtctgaccattggcgccgcggagtggctgtcagcatggtaatctgggtgctcactttg
tcaatgtccatgccgtacctcttggagacgggcatccaggtggacggcggcaacgtgtcg
cgctgctttgagggctaccacgacaagacagacgacgagaagcggactgtggccaccacc
cacctcatcatcgtgggttgctttgtcttggtcttcttcctcgtagtggtctgtaacctg
ctcatcgcccgggccctgcttgcccagtcccctacccagactcggggctccagttcatcc
cagctccggggggtgaagggccaggccctacagatgctgtgtgctgtggtgggggtgttc
gtggtgtgcttcctcccccaccacgtggtccagggcccctggactctggctgtactggag
atcaaggagggctggggcagaatggactggggccagcggaccaggcagaggcttaacgac
gcccaccaggtcaccttgatgctgatggggctcaactgcctcctggaccctgtggtgtac
tgcttcgccaccaggaagttccgcctgtacatcaagaacaatctgaaaaaggtggggagg
ggcaaaagatgctcagaaacagccatcacacacatttctatggtggagggcaagaatgtg
agccagcggctccatagcgaacagcagcagttgaaggtttaa
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