Salmo trutta (river trout): 115172948
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Entry
115172948 CDS
T08542
Name
(RefSeq) calpain-1 catalytic subunit-like isoform X1
KO
K01367
calpain-1 [EC:
3.4.22.52
]
Organism
stru
Salmo trutta (river trout)
Pathway
stru04141
Protein processing in endoplasmic reticulum
stru04210
Apoptosis
stru04217
Necroptosis
stru04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
115172948
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
115172948
04217 Necroptosis
115172948
04218 Cellular senescence
115172948
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
stru01002
]
115172948
Enzymes [BR:
stru01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.52 calpain-1
115172948
Peptidases and inhibitors [BR:
stru01002
]
Cysteine peptidases
Family C2: calpain family
115172948
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
CAPN13-like_C_EFh
EF-hand_1
EF-hand_6
Motif
Other DBs
NCBI-GeneID:
115172948
NCBI-ProteinID:
XP_029586705
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All DBs
Position
33:complement(37734900..37752626)
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AA seq
698 aa
AA seq
DB search
MPPPGVCMSIMQERYKEDGVGSLANAGKHRNQDFKQLKQYCLDRRVRYIDEMFPPDHNSI
GEGLLSPDDMGRVVWLRPAKIAQNPDFIISGFSRFDFGQGSIANCWFLASVGALTFQMHI
LEQVVPLKQSFKDDYCGIFHFRFWRFGRWVDVVIDDMLPTVDGRLIFVHSKTPNEFWPAL
MEKAYAKVCGSYADMNAGTPSEAMMDFTGGVHITFKLAETPPNLWDLLFRAAKFKSLMGC
NTPQGETSANTVAPNGLVRGHAYTITGVLQIMSQGRPVNLIRLFNPWGYGEWKGDWSDKS
SMWKTVSPADRKMYLSVEEDGEFWMTMENFCQHFSDVTICCLCPDFLDGNSEGHWTPSFH
DGRWVAGTTAGGCLQFRDSFWTNPQYRVKIEGFDMDFSETQGDNNMLVSLMQKPDKRNRR
LVKSVHMGIIIFEVPAQFKGQRGKFPASFFKTNAPVAQTKNFLNARTVMLLCRLKPGEYL
IVPSSFKPNETASFILSILSKAETHIHENSNDQDMEETPKLTPTDNREDMGNKRTLFREY
SDQFEEVDAEQLQRSLDENLLQGYAKKTQGFSLESCRSMVALMDTSITGRLNSDEFLRLW
RKVTMYKDIFFCSDVDRSGMLSSSQLRNAIMASGIRLSDNLLNLIALRYGGSSGNISLES
FISLVLRMDRMAKIFRELNNGGAISLRDNEWMYITMYA
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atgcctcctcccggtgtgtgtatgagtataatgcaagagcgctacaaagaagatggtgtt
gggagccttgccaacgctgggaaacacaggaaccaagacttcaagcagctgaagcaatac
tgtttggacaggagggtgaggtacatcgatgagatgttcccaccagaccacaactccatt
ggtgaagggctactttcccctgacgacatgggtagagtggtgtggctgagaccagcgaaa
attgcccaaaatccagatttcatcattagtggattttcaaggtttgactttgggcaagga
agtattgcaaattgctggtttcttgcttccgttggggctttgacattccagatgcacatc
ctggagcaagtagtaccactaaagcagagttttaaagatgattactgcggaatattccac
ttcaggttctggaggtttgggaggtgggtggacgttgtgatcgatgacatgctaccaaca
gttgacggcaggctcattttcgtccattcgaaaactcccaatgagttttggcccgccttg
atggagaaagcctacgccaaagtgtgtggctcctacgcagacatgaatgcagggacccct
tcagaggctatgatggacttcactggaggggttcacatcacattcaagctcgctgaaacg
ccaccaaatctgtgggacctcctgttcagagctgccaagttcaagtctctgatggggtgt
aacaccccacaaggggaaacatcagcgaatacggtggcacccaacggattagtgaggggt
catgcttacaccatcacaggagttctacagatcatgagccaaggcaggccagtgaatctc
atccgcctcttcaacccctggggttatggagagtggaagggagactggagcgataagtct
tccatgtggaaaacagtgagtcctgccgatcggaagatgtatctgtcagtggaggaggat
ggggaattctggatgacaatggaaaacttttgtcagcacttctcagatgtgactatctgc
tgtctgtgccctgattttcttgacggcaactctgaaggtcattggacgccttctttccat
gatggcagatgggtcgcagggaccactgctggtggttgccttcaattccgagacagtttc
tggaccaatccccagtatcgagtgaagattgagggatttgacatggacttctctgagaca
cagggggacaacaacatgcttgtgtctctgatgcagaagccagacaagagaaaccgacgc
ctggtcaaaagtgtccacatgggcatcatcatcttcgaggtacctgcccaattcaaagga
cagagggggaagtttcctgcctccttcttcaaaaccaatgcacctgtcgcccaaaccaag
aacttcctgaatgctcggacagtgatgctcttatgcaggctgaaacctggcgaatatctg
attgtgccatcatccttcaaacccaatgaaaccgcttccttcatcctgtccatcctctcc
aaggcggagacgcacatccatgaaaattccaatgaccaagatatggaggaaaccccaaag
ctcacacctaccgacaatagagaagatatgggcaacaaacgaactctatttcgggaatat
tctgatcagtttgaggaggtggatgctgaacagcttcagagaagtctggatgaaaatctc
ctccaaggatatgcaaagaaaacacaaggcttcagcttggagtcctgtcgaagcatggtg
gccctaatggatacatcaatcactggaagactgaacagtgatgaatttctacgtctatgg
agaaaagttaccatgtacaaggatatcttcttctgttcagatgtggaccgttctggaatg
ttgtcatcgagtcaactgaggaacgcaatcatggcttcagggatcaggctgagtgataac
ctgttgaacctgattgctctgcgctacggtggatcttctggaaacatcagcctggagagt
ttcatcagcctcgtcttgcgcatggaccgcatggccaaaatattcagagaactcaataat
ggaggggccatatctcttcgagacaatgagtggatgtacatcactatgtatgcataa
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