Salmo trutta (river trout): 115172988
Help
Entry
115172988 CDS
T08542
Name
(RefSeq) serine/arginine-rich splicing factor 5-like
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
stru
Salmo trutta (river trout)
Pathway
stru03040
Spliceosome
stru05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
115172988
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
115172988
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
stru03041
]
115172988
Spliceosome [BR:
stru03041
]
Common components
Common spliceosomal components
SR proteins
115172988
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_5
RRM_occluded
Nup35_RRM_2
OB_RNB
Motif
Other DBs
NCBI-GeneID:
115172988
NCBI-ProteinID:
XP_029586803
Ensembl:
ENSSTUG00000027264
LinkDB
All DBs
Position
33:39955521..39960889
Genome browser
AA seq
317 aa
AA seq
DB search
MSGCRVFIGRLSPHARERDVEKFFKGYGRIREVNLKNGFGFVEFDDHRDADDAVYELNGK
ELCSERVTIEHARSRRGRGGGPGMGGGGGGGGGRFSPRFSSYRQGSGGHGGGGGGGSSRY
GPPVRTEHRIIVENLSSRISWQDLKDLMRKAGEVTFVDAHRTNKNEGVVEFASHSDMKNA
IDKLDGTDLNGRKLKLSEDRKSRHSRSRSRGSRSYSRSRSRSPRSKSRSRSRNRSRSPRS
RSASRTPEKKPSSGGGGGGRAVHRSTSRSPSRSRSPAPRSRTPPPRSRSRTPPPSSPAPA
RKQSPSRSRSPSAESQH
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgagtggatgtcgtgtgtttatcggtcgtttgagccctcacgcccgtgagagggacgtg
gagaaattcttcaagggatatggaaggatccgagaagtgaatttgaagaacggattcggc
tttgtggagtttgacgaccacagagatgcggatgatgccgtatacgagctgaatggcaag
gaactctgtagtgaaagggtgacgatagagcatgcccgctccagaagagggaggggtggt
ggaccagggatggggggtggtggtggaggaggaggaggacgtttctcacctcgtttcagc
agctaccgccagggctctggtggtcatggtggtggtggtggtggtggttccagtaggtac
ggtcccccggtgcgaacggagcacagaatcattgtggagaacctgtcgtcacggatcagt
tggcaggacctgaaagacctgatgaggaaagccggagaagtcacctttgtggatgcacac
agaaccaacaagaatgaaggggtggtggagttcgcatcacacagtgatatgaagaatgcc
attgataagctggacggaacagacttgaatggacgcaagttgaaactgtctgaggatcgc
aagagccgccacagcaggagtcgttcccgtggctcccgtagctactcccggtcccgtagc
cgttccccccgctccaagtcccgtagcaggagtcgtaaccgctccaggagcccccgatct
cgctcggccagccgtaccccggagaagaagccttcatctggaggaggaggagggggcagg
gctgtacatcgttccacctcacgctccccgtcccggtccagatcccctgcccctcgctcc
cgtacccctcccccacgctcccgttctcgcacgcctcctcccagttcccctgccccggcc
cggaagcagtctccgtcccggtctcgctccccctcggctgagagccagcactga
DBGET
integrated database retrieval system
