Salmo trutta (river trout): 115173211
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Entry
115173211 CDS
T08542
Name
(RefSeq) iroquois-class homeodomain protein irx-4-A-like
KO
K24889
iroquois-class homeodomain protein IRX
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
stru03000
]
115173211
Transcription factors [BR:
stru03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
115173211
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Motif
Other DBs
NCBI-GeneID:
115173211
NCBI-ProteinID:
XP_029586990
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Position
34:complement(22817425..22821396)
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AA seq
447 aa
AA seq
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MFDIMAYPQLGYPYSPTHQFLMSTSSLANCFEPGGRSLLDSGVTHPSPQPLRCPVYESRL
LGSPGQEIPTPAIGLGVYGAGYGKSQGYYGTCGGDATALYARGTLESKDGASAHVGASQT
PAYYPYDYAFGQYPYDRYGYGSSVDSAAARRKNATRETTSTLKAWLQEHQKNPYPTKGEK
IMLAIITKMTLTQVSTWFANARRRLKKENKVTWSPRANKSSDERGCEDDSDGVEGSQEEE
PIKREIEVDDSVTGRCVDLKQSDLEDFDLLESDGSDCDPKHRFHTKDTPVHTPPDHRHHP
KDPSNSPLTHTPDTLRHGNERLPQSADCLKNTPDHDRTTNSFYTQRDLQSTESSKPNIWS
IAQTATVQPEFPPCMHTATPSKSLSPGGYLTEVPHLKVRAAEQQDSPVATLRDWVDGVFH
DPLFRQSSFKPVLSKSAMDRVWIGLNG
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgtttgatatcatggcttacccgcagctaggatacccctactcacctacacaccagttc
ctcatgagcacgagctctttggccaactgcttcgagcctggcggaaggtctctcctggac
tcaggtgtgacgcatccctctccccagcctcttcggtgcccagtgtacgagagcaggctg
ctcggctcccccggccaggagataccaaccccggctataggtctgggtgtgtatggagct
ggctatggaaagagccaagggtactatggcacctgcggaggcgacgcaacagctctatat
gccagggggaccttggagtccaaagatggagcgtctgcacatgtgggggcctctcaaacc
cctgcatactatccatatgattacgcgtttgggcagtatccatatgaccgatatgggtat
gggtcatcagtggacagtgccgcagcacggaggaagaacgctaccagggagaccaccagc
actctgaaggcctggctgcaggagcaccagaagaacccgtatcccaccaagggagagaag
atcatgctggccatcatcaccaagatgacacttacacaggtgtccacgtggtttgccaat
gcacggcggaggttgaagaaggagaacaaagtcacatggtcaccacgagccaataaaagc
tctgatgagaggggctgtgaagatgacagtgatggtgtggagggatcgcaagaggaggag
ccaatcaaacgtgagatagaggttgatgactctgtaacggggaggtgtgtggacctaaaa
cagagtgacctggaggactttgatctgctggagtcagatggttctgactgcgaccctaaa
caccggtttcacaccaaagacaccccagtacacacaccaccggaccaccgccaccacccc
aaagacccttccaacagcccactcacacataccccagacacactccgacacgggaatgaa
cgattgccacagtcagcagattgcctcaaaaacacaccagaccacgaccgaacaaccaac
tcattctacactcaacgggacctgcaaagtacagagagcagcaaacctaacatctggtcc
attgcacaaactgctactgtccaacctgagttccctccatgcatgcacacagccacccca
agcaagtccctctccccaggggggtatctgactgaagtaccccacctgaaggtgagggcg
gctgagcagcaggactcgccagtggctactctgagagattgggtggacggggtcttccac
gacccgctgttcagacagagttcctttaaacctgtgctgtccaagtcagccatggacagg
gtgtggattgggttaaatggatag
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