Salmo trutta (river trout): 115173379
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Entry
115173379 CDS
T08542
Name
(RefSeq) hypermethylated in cancer 2 protein-like isoform X1
KO
K10502
zinc finger and BTB domain-containing protein 22
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
stru03000
]
115173379
04121 Ubiquitin system [BR:
stru04121
]
115173379
Transcription factors [BR:
stru03000
]
Eukaryotic type
Zinc finger
Cys2His2 BTB-ZF factors
115173379
Ubiquitin system [BR:
stru04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
115173379
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BTB
zf-H2C2_2
zf-C2H2
zf-C2H2_jaz
zf-C2H2_4
zf-Di19
DUF5810
C2CH-4th_BIRD-IDD
BTB_KLHL33
zf-C2H2_6
BTB_BTBDG
Motif
Other DBs
NCBI-GeneID:
115173379
NCBI-ProteinID:
XP_029587264
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All DBs
Position
34:complement(5228106..5248750)
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AA seq
714 aa
AA seq
DB search
MDQDCIVSGAPAGPVVQVCFPNVRAAVLDSLNRQREEGRLCDLSIQVQGQVFRAHRCVLA
ASSPYFHDQVLLKNVMTVSLPSVMDPVAFESVLSSAYTGRLSIVRDDIVNYVTVASFLQM
WHIVDKCTEILKRPRPPTECNPVDVAAATHHGASSRQQSPSSTDCLYMEREGKEKQKRTY
GQVQNALPPLATWRRPHQFPRWGHPRSSPQPAMSMPVQHLADSQLDSHPAGESDYSSCEE
VWMSSHSKASPLSHHDGRGLDHSHTRHVGFPGEALRLRARLRQRAVPPSAEKLHGRDRGS
GEGYGEDPQEKKGTERVIEASEGMGEELEEEKREGPELRGHSVDFHSGVHQGEEGRQPEG
RKSSGELQKKEERQLGRSSALTSPHAGEPDEVIPGPSCSASTPSTQKQWQASPWSQQVAR
PQAGEEDYRREDDEEDDEGEVDFGRFAEGAFGRETYDEIEDGTGQVSQRPLVPTSPDDND
FILGAPELNWPNGAKMTHGGGTPTSTSSCHLSPSPAPFPPSSSPPIPSSSSSISLAGAPY
TGKVHFCHCGKAYTLKSMRDRHVKMQHLNLRPFACPVCAKSFKMKHHLTKHLKTHGGLRP
YECSLCGKKVIWRDSFLRHQARCERLAASYDGAAASSNTTAAADMDDGYAYGFKEGEVFF
SQGGQVKVEQADCQGEAESGMSALLAGGVGTELGSQSRTVVSHSFKEEASNRFS
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atggatcaggactgcattgtctctggtgcccctgctggcccggtggtccaagtatgcttc
cccaatgtgcgtgcagcagttttggacagcctgaatcgacagcgggaggagggccggctc
tgtgacctctccatccaggtgcagggacaggtgttcagggcccaccgctgtgtgctggct
gcctcctcgccatactttcacgatcaggtgttgcttaagaatgtgatgacagtgtctctg
ccctctgtcatggaccctgtggcctttgagagtgtcctgagttcagcctacaccggccga
ctgagcatagtgcgtgatgacattgtcaactatgtaacggtagccagctttctccagatg
tggcatattgttgacaaatgcacagagatcctgaagagacctcgacccccaacagaatgc
aaccctgtggatgttgcagctgccacacaccacggtgcctcctcaaggcagcagtcccca
agcagcaccgactgcctatacatggagagagaggggaaagagaagcagaagaggacctac
ggtcaggtgcagaatgctctgccgccattggccacgtggaggaggccccatcagttcccc
aggtggggccaccccaggtcctcaccccagccagccatgtccatgcctgtccagcaccta
gctgactcacagctggactcccaccctgctggggagagtgactactccagctgtgaggag
gtgtggatgtccagccacagcaaagccagccccctaagccatcatgatgggagaggactg
gaccatagccacaccaggcacgtggggtttcctggtgaggcattgagactgagagctaga
ctgagacagagggcagtgccaccaagtgctgagaaactccatggcagggatagaggaagt
ggagagggctatggggaagatcctcaggagaagaaggggactgaaagagtgattgaagca
agtgaaggaatgggagaagagttggaagaggagaagagggagggtcctgagctgagagga
cactctgtagacttccactctggtgtacaccaaggtgaggagggacgacagccagagggg
agaaagagctcaggggagctgcagaagaaagaggagagacagttggggagaagttcagcc
ctgacttctccccatgctggggaaccagatgaggtgattcctggaccctcctgctcagct
tctacaccctctacccaaaagcagtggcaggcgagtccctggtctcagcaagtagctagg
ccgcaagctggagaggaagactacagaagagaagatgacgaagaagatgatgagggggaa
gtggactttggccgatttgcggagggtgcctttggaagggaaacctatgatgagattgag
gatggcaccggacaagtttctcagagacccttagtacctacctctcctgatgacaatgac
tttatcctgggggccccagagttgaactggcccaatggggcaaagatgacccatggtggt
ggtaccccaacctccacctccagctgccacctgtccccatctcctgctccattcccccct
tcgtcctcaccccccatcccatcttcctcctcttccatctcccttgccggggccccttac
acaggaaaagtacacttctgccactgtgggaaggcctacaccctgaagagtatgcgtgac
cgccacgtcaagatgcagcatctcaacctgcggcccttcgcctgccccgtgtgcgccaag
agcttcaagatgaagcaccacctcaccaagcacctgaagacccatggcgggctgcggccc
tacgagtgtagcctgtgtgggaagaaggtcatctggagggatagtttcctgcgccaccag
gcacgctgtgagagactggccgccagctatgatggagccgctgccagtagtaacaccaca
gcggctgctgacatggacgatggttatgcctatgggttcaaggagggggaggtttttttt
tcacagggcggtcaagtgaaagtggagcaggcagactgtcagggagaggcagagtctggg
atgagtgcgttgttagcgggtggggttgggactgaattaggctctcagtcaaggactgtg
gttagtcacagctttaaagaggaagccagcaacaggtttagctga
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