Salmo trutta (river trout): 115173453
Help
Entry
115173453 CDS
T08542
Name
(RefSeq) elongation factor 1-alpha, oocyte form
KO
K03231
elongation factor 1-alpha
Organism
stru
Salmo trutta (river trout)
Pathway
stru03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
115173453
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stru03019
]
115173453
03016 Transfer RNA biogenesis [BR:
stru03016
]
115173453
03012 Translation factors [BR:
stru03012
]
115173453
04131 Membrane trafficking [BR:
stru04131
]
115173453
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
stru04147
]
115173453
Messenger RNA biogenesis [BR:
stru03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
115173453
Transfer RNA biogenesis [BR:
stru03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
115173453
Translation factors [BR:
stru03012
]
Eukaryotic type
Elongation factors
115173453
Membrane trafficking [BR:
stru04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
115173453
Exosome [BR:
stru04147
]
Exosomal proteins
Proteins found in most exosomes
115173453
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
Gtr1_RagA
EF-G_D2
Motif
Other DBs
NCBI-GeneID:
115173453
NCBI-ProteinID:
XP_029587387
UniProt:
A0A674E1I4
LinkDB
All DBs
Position
34:8247060..8250703
Genome browser
AA seq
461 aa
AA seq
DB search
MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVL
DKLKAERERGITIDISLWKFETGRYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAGGV
GEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSQKRFEEIQKEVSTYIKK
IGYNPATVAFVPISGWHGDNMLEASANMGWFKGWKVERKDGNANGVTLLEALDSILPPSR
PTDKPLRLPLQDVYKIGGIGTVPVGRVETGTLKAGMIVTFAPANVTTEVKSVEMHHETLE
SAMPGDNVGFNVKNVSVKDIRRGNVAGDSKNDPPMEAGTFTAQVIILNHPGQISQGYAPV
LDCHTAHIACKFSELKEKIDRRSGKKLEDAPKFLKSGDAAIVDMIPGKPMCVESFQEYPP
LGRFAVRDMRQTVAVGVIKAVDKKAASSGKVTKSAVKAGKK
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaggaaaagatccacatcaacatcgtggtcattggccatgtcgactccggcaag
tccaccaccaccggccatctgatctacaaatgcggaggtattgacaagagaaccattgag
aagttcgagaaggaggctgctgagatgggtaagggctctttcaagtatgcctgggtgctg
gacaagctgaaggctgagcgtgagcgtggtatcaccatcgacatttccctgtggaagttt
gagactggcaggtactacgtcacaatcattgatgcacccggacacagagacttcatcaag
aacatgatcaccggtacctctcaggctgattgcgctgtgcttatcgttgctggtggtgtt
ggtgagtttgaggccggtatctcaaagaacgggcagactcgtgagcacgctctccttgct
ttcactctgggagtgaagcagctcatcgttggagtcaacaagatggactccacagaaccc
ccctacagccagaagcgttttgaggaaatccagaaggaggtcagcacctacatcaagaag
atcggctataaccctgccacagtcgcctttgtgcccatctctgggtggcatggggacaac
atgctggaagctagcgccaatatgggctggttcaagggatggaaggtcgagcgtaaggat
ggtaacgccaatggtgtgactctgctggaagccctggacagcatcctgcccccatcccgc
cccacagacaagccccttcgtctgcccctccaggacgtttacaaaatcggtggtattgga
actgtacctgtgggccgtgtggagactggaaccctgaaggccggtatgatcgtcaccttc
gcccccgctaacgtcaccactgaagtgaagtctgtggagatgcaccacgagaccctggaa
tcggctatgcccggtgacaacgtcggcttcaacgtcaagaacgtgtccgtcaaggatatc
cgtcgtggcaacgtggctggagacagcaagaacgaccctccaatggaggccggcactttc
actgctcaagtcatcatcctgaaccaccctggccagatctcccagggctatgcccctgtg
ctggattgccatactgctcacatcgcctgcaagttcagtgagctcaaggagaagatcgac
cgtcggtccggcaagaagcttgaagatgcccccaaattcctgaagtctggagacgctgct
atcgttgacatgatccccggcaagcccatgtgtgtggagagtttccaggaatacccccct
cttggtcgttttgctgtgcgtgacatgaggcagacagttgctgtcggtgtcatcaaggct
gttgacaagaaggccgcctcaagcggcaaggtcacaaagtctgccgttaaggccggtaaa
aagtga
DBGET
integrated database retrieval system
