Salmo trutta (river trout): 115173512
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Entry
115173512 CDS
T08542
Name
(RefSeq) zinc finger protein 227-like isoform X1
KO
K09228
KRAB domain-containing zinc finger protein
Organism
stru
Salmo trutta (river trout)
Pathway
stru05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
115173512
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
stru03000
]
115173512
Transcription factors [BR:
stru03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
115173512
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
Myb_DNA-bind_4
TINF2_N
zf-C2H2_4
zf-C2H2_jaz
zf-C2H2_6
zf-met
zf-Di19
DUF6471
MADF_DNA_bdg
Myb_DNA-bind_3
GeBP-like_DBD
C1_4
Sucrose_synth
GAGA
Motif
Other DBs
NCBI-GeneID:
115173512
NCBI-ProteinID:
XP_029587518
LinkDB
All DBs
Position
34:complement(9572873..9598780)
Genome browser
AA seq
1449 aa
AA seq
DB search
MALADDVEWTWSPEETKALISVWSDEQNILEMEQTCRKKHVYREISERLNDLGVKRTWKQ
CQNKMKALKYKYRQTRRDPNSSGRTTFPLFSELDEFLAAMPDMTESKETGDEEDGRPLPL
SSLRLLVPPLRLVSAALWQVVQRRDTMDYGLVEEFVTTVLEITPDLMSYREKVQLIMGLR
AQLVLELCRSDHSADPETIQPHLSRMRTCIITHREKEIDTEVEASESNFLELIQTLLDDP
LEREHFFQEVFPEEFGPMYDTALQTLMWEFLSRLEKLLPTPTFQQTASWLRPVPSMLKEC
AQSVTQPQPLKTLLQHHRCHGHLFANAHSSCDDGRILSSLSHKFPPSERVEMDIDEARSH
SQSKATCGPRKERDTLIEQDNAEKELGMSLDTVKKAVEMTDRRNEEWGEKNYEERLQHQL
DYNVLQVEIVDGEDMSSTSSMTADDVGWTCWTPDETTALISVWSDEQILHKMEQSYRKKH
VYREISECLKELGVKKTTKQCHNKIKALKWRYRETLRNPSSRPCPFFSRLHKFLAAMPDM
PGSKETVKVSDEVVSLNQDIGPVDVELEHLNEEMVSRKGKDETLTREQTEEGKRDDAFCS
PQSDRKMKIPPRKLCRKQMVEDMSSTTLVDNDTRTWTLEGTKALISVWSNKQVLQMMEQS
YRKKHAYSEVSERLKNIGIKRTWKQCQSKMKHMKHSYRQALRNPSSSGRATCPFFSELHN
FLAAMPDMPGSKETVKVSDEVVSSDQDEGPSVDVESEHLNEEVVSRKGKGETPTREQTEE
RKRDESDSRMNIGRKQAVEDVSDLELKPVVPQTQVDDNGLVTGGDPRPVSHTTGQCTKRS
KRAKICSLCGKSFVEAKDLTTHMRSHTEQSPHQCTQCGEGFDHPDDLQKHWQNDCEEMMK
QGVNEHQHGKDRISGESSNASTDPKTCHLCHETFQFQYMLRRHLIVFHKGRRLFKCPLCL
KGFSFLSALKKHQSNKRGCPTSEAVKKRKELGSKKPSARITPGLSLNTNNSKTCPVCHAT
FSQTSSLKSHYFYHHAPDKSRFKCPRCLKAFVSHSQRKRHQQSKRGCRLERSHKNGSRPA
WSLTLKEKKNEIPQPSSTATQEPTTSQVPTTTAQSSNKKTIPKACPVCQKTFKFEATMVR
HIASHQKESLNKCPDILKCTFCEEIFSQGMDLKSHYSRTHQFTGPFPCPSCQKTFVSLTE
LRLHQRNESTPYQCSVCQRLFRTQYTLTIHERIHTGEKPFLCAECGKGFRSEKLLQSHSK
SHVEGKPHSCSTCGKRFQRRELLKQHMLHHKDAAFICPDCGKKFFQLVWLRRHMLIHTGE
RPFLCDLCGKGFKSTAELRIHTRTHTGERPFKCQECGKGCRQKSELQEHLRRHTGERPYP
CPICDKRFYVSKDRKRHMLIHTGEKPFKCQACGMAFNRRTLLRVHQKNKLCLYSHTSPLH
YTPLHYTSL
NT seq
4350 nt
NT seq
+upstream
nt +downstream
nt
atggcactggcagacgatgtcgaatggacatggtcgccggaggagacaaaggcgctgatc
tccgtatggtcagacgaacagaatattctggaaatggagcaaacatgtagaaaaaaacat
gtttacagggaaatttcggagcggctaaatgaccttggtgtcaaacggacgtggaagcag
tgtcaaaataagatgaaggccttgaagtataaatacagacaaacacgaagagacccaaac
agtagtggccgaacaacctttccattattttctgaactggacgaatttctcgccgccatg
cctgatatgaccgagtctaaggaaactggcgacgaggaagatggtcgtcctcttcctctg
tcgtctctgcgtcttttggttcctccactgcggctggtgtccgcagctctatggcaagtt
gttcagcgcagagacacaatggactacgggttggtggaggagtttgtaaccactgtgttg
gagataacccctgacctgatgagttacagagagaaagtccagctcatcatggggctgcga
gcacagctggtcctggagttgtgtcgctctgatcattcagccgacccggagaccatccag
ccacacctgagcaggatgaggacctgcatcatcactcatagagaaaaggagatagataca
gaggtcgaggcatcagagtcaaacttcttggaactcatccaaactcttctagatgaccca
cttgagagggagcacttcttccaggaagtttttccagaagaatttggccccatgtatgac
acagcactgcagactctgatgtgggagttcctctccaggctggagaaactgcttccaaca
ccaacatttcaacagactgcatcctggctcagacctgtcccctctatgctgaaggagtgt
gcacagtctgtgactcaacctcagcctctgaagactctcctccagcaccacagatgccat
ggccacttgttcgctaatgctcattcatcttgtgatgatggtcgcatcctctcttcactg
tctcacaagtttccaccttcagagagggtggaaatggacattgatgaagcacgctcacat
agccagtctaaagccacatgtggacccagaaaagaaagggacactttgatagagcaagat
aatgcagagaaggagctggggatgagtttggacacggttaagaaggcagtggaaatgacg
gatagaaggaacgaagaatggggagagaagaactatgaggagagactgcaacatcagttg
gattataatgttttacaggtcgagattgtagatggagaagacatgtcctcaacgtcatcg
atgacagcagacgacgtcggatggacctgctggacccccgatgagacaacggcgcttatc
tctgtatggtcagatgaacagattcttcataaaatggagcaaagttatagaaaaaaacat
gtgtacagagaaatttctgagtgtttaaaggagcttggtgtcaaaaagacgacgaagcag
tgccacaataagataaaagccttgaagtggagatacagagaaacactgaggaacccaagc
agccgaccgtgtccattcttttctcgactgcacaaatttctcgccgccatgcctgacatg
cctgggtccaaggaaactgtcaaggtttccgatgaagtcgtgtctttgaatcaggatata
gggcctgtggatgtcgagttggagcatctaaatgaggaaatggtttctagaaaagggaaa
gacgagaccctcaccagagagcaaacagaagagggaaagagggatgatgctttttgcagc
cctcaaagtgaccgcaagatgaaaatcccccccagaaaactgtgtcgcaaacagatggtt
gaagatatgtcctcaacaacattggtagacaatgatacacggacctggaccctggagggg
acgaaagcactgatctccgtgtggtcaaacaaacaggttcttcagatgatggagcagagt
taccgaaaaaaacatgcgtacagtgaagtttcagagcggctaaagaacattggcatcaaa
aggacgtggaagcaatgccaatcaaagatgaagcacatgaagcacagctacagacaagca
ctgaggaacccaagcagtagtggccgagcaacctgtccgttcttttctgaactgcacaac
tttctcgccgccatgcctgacatgcctggttccaaggaaactgtcaaggtttccgatgaa
gtcgtgtcttcagatcaggatgaagggccttctgtggatgtcgagtcggagcatctaaat
gaggaagtggtttctagaaaagggaaaggcgagacgcccaccagagagcaaacggaagag
agaaagagggatgaaagtgacagccgaatgaatattggaagaaaacaggcagttgaagat
gtgtctgatttggaacttaaacccgtagtgccgcaaacccaagttgatgacaacggtctt
gtgacaggtggtgatcctcgtcctgtttcccataccacagggcagtgtactaaaagaagc
aaacgtgccaaaatatgctccttatgtgggaagagttttgttgaagcaaaagatttgaca
acacacatgagatctcacactgagcagagccctcaccagtgcacccagtgtggggaaggc
tttgaccacccggacgacttacaaaaacattggcagaatgattgtgaggagatgatgaaa
cagggggtcaatgaacaccagcatggaaaggacaggatctcgggagagtccagtaatgca
agtactgatccaaaaacatgccatctatgccatgagacttttcaatttcagtatatgttg
agaaggcatcttattgtgtttcacaaaggcagaagactttttaagtgtcctctttgtctg
aagggtttttccttcctcagtgctttgaagaaacaccagagtaacaaaagaggttgtcct
acaagtgaagccgtcaaaaaaaggaaggagttagggtcaaaaaaaccttctgcccgcata
actccaggactttccttaaatacaaataattccaaaacgtgccctgtatgccatgcaact
ttttcacaaacgtctagtttgaaaagccactatttttaccatcatgccccagacaaaagc
cgcttcaagtgtccccgatgtttgaaggcttttgtatcccacagtcaaaggaagagacac
cagcagagcaaaagaggttgtcggttagagagaagtcacaaaaatgggagtaggccagca
tggtcgctgactcttaaagaaaagaaaaatgagattcctcagccttccagtacagcaacc
caggaaccaacaacctctcaagttcccaccactacagcacagtcctctaataaaaagaca
attcccaaagcatgtcctgtatgccagaagacttttaaatttgaagcaaccatggtaagg
cacattgcttctcaccaaaaggaaagtctcaacaagtgccctgacattttgaagtgtacc
ttttgtgaagagatcttttctcagggcatggacctgaagagccactacagtcgtactcat
caatttacgggaccgttcccatgcccttcatgtcagaagacttttgtttcattaactgag
ctgcgcttacatcagagaaatgagtccactccttaccaatgctcagtgtgccagcgacta
ttccgaacacagtataccttaactattcacgagcgaattcacacaggggagaaaccgttc
ctctgcgccgagtgtggaaagggtttccggagtgaaaaactactacaatcacactctaag
agtcacgttgagggaaaaccccactcttgctccacttgtgggaaaaggttccagagaaga
gagctattaaaacaacacatgttacatcacaaagatgccgctttcatctgcccagactgt
gggaagaagttttttcagttggtatggttaagaaggcatatgttaatccacactggcgag
agaccgttcctctgtgatctctgcgggaagggtttcaaatctacagctgaattgaggata
cacacccggacacacactggagaacggccgttcaagtgccaagaatgtggaaaaggttgt
aggcagaagagtgagctgcaggagcatctacggagacacacgggggagcggccgtatccg
tgccccatatgcgataaacgcttttatgtcagcaaagatagaaaacgacatatgctcatc
cataccggagagaaaccgttcaaatgtcaagcatgtggcatggctttcaaccgtagaaca
cttttgagggtacaccaaaaaaacaagttgtgtttatatagccatacgagtcccctacat
tatacacccctacattacacatcattgtaa
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