Salmo trutta (river trout): 115173528
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Entry
115173528 CDS
T08542
Name
(RefSeq) protein capicua homolog isoform X1
KO
K20225
capicua transcriptional repressor
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
stru03000
]
115173528
Transcription factors [BR:
stru03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
115173528
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4819
HMG_box
HMG_box_2
Zf_WRKY19
Motif
Other DBs
NCBI-GeneID:
115173528
NCBI-ProteinID:
XP_029587561
Ensembl:
ENSSTUG00000024445
UniProt:
A0A674AEG8
LinkDB
All DBs
Position
34:complement(10003641..10037890)
Genome browser
AA seq
2564 aa
AA seq
DB search
MKPIKKQGRRSPPSTRAKGGKRRGTGDSGEKRDSDENRDRSPKSQTSPQTSSHSESSQEE
SVTLTTMATPEREGHREGPRLPETAAAAAASLPGKSEDSRPGSVKSLSAHSTDSSSSAAS
AANSPNPSSNRKTATFKARVPKKKYTSEHCAAAAAAAANHGNPGNTGAPPLNRNSAHCDS
NAGSQLSSLSSGPGSVASEGGSLTDINSQTRRPVEDYITTVAPPQDRDNTPGPPPTGDRD
RRGPEGGREISPSPVRCSSTDTASEHDLDVSEPHRSNSHHTNPTTEAHTLALVQRSTPRT
PTPQSLSDALADALAKGLKNQRVLARQARRRTGKGEEENGRGGGRESMDSVFRAGVVRRV
SGEHGSLEVQLNGEKELYRYPFREGAQGPVDIIMDAPPPGSQAVPIGTPVCVPFGGNEDG
GTTEAQRQWYREGLVTQVDSHPAVSYPYRVLLEDRVPPGDEEGDGRVGTPTAVWVSRQSL
RLLVPPWDLDLGPCGGGREESDAAAKRGREREREKEDRDEIEVEQELCRLSRGMGLSAAV
AGSVLGRLSYPGTAPASSSSSTVSSPVTPASVLSLVPGRDWEREKDLVERERKQERDNRE
RAKQHHHFMPLTPEEDIEVSHFSMVPMGAAGGAAKALTVSQHRHILSKPPPGYLSPHLSV
VRSLGGTPLVGPHLALNPHPPPSPTVLLGLESGALAAGAAVIATPQLPPLSSSSSRGSLD
KPPSSNSNSHGASGGGGGSCSSSTSSSRSRTPLTAAQQKYKKGDVVCTPTGIRKKFNGKQ
WRRLCSREGCSKESQRRGYCSRHLSMRTKEMEASGGGRDRGGASSTGTLTPSDLRLGGGR
TSSEFDWDNTSRDSSEASSRGGDSRPRLVLPSLLPQDLSRFDFDECEAATMLVSLGSSRS
GTPSFSPISNQSPFSPTPSPSPSPLFVFRPATFSPITAPPSLTPRRHRHLSGTKMGTPGS
ERERHLSGIVPTFQTNLTFTVPMSPSKRKLDALPPPLPLSAQDYAKPDQQLGETIGLSPA
AFRVLSPQSQPTTPSSLSFPRPRSATSRPPSSAASTPPPMLVSPTPPSPLPQDPSPRRVV
PLRDSPVIVRNPDVPLAKFTDGPLVRRGGGGRSSREHSQPLHLATGLQAPVPINGAATNG
AVLLRNPASTLVLVTSSQSLTPAVAGHPAHSSPTLSGDSASISSTGSALSSSGSGGREWE
RKPGGHQDAIGGALPQPVACHPSPTALLPLILPAESPHPAPRKDIIIGRPGTVWTNVEPR
SVPVFPWHSLVPFLEPSQSSAAAQPADGQQLVNQRKEPRCGVALVSDGWVGPPDAEQGSP
SRPPPSSNDNDPPAGRAERGGADSETESDADDPFFPGVANDPAPSTGPIKRRTQSLSALP
KDGDRKREKDHIRRPMNAFMIFSKRHRALVHQRHPNQDNRTVSKILGEWWYALGPKEKQK
YHDLAFQVKEAHFKAHPDWKWCNKDRRKSISEGRETPGAKEARERSMSESTEPESVSQGM
EVKGAAGPDWPGGSERHAGAYSGQLPRPRAFSQSAVHSLERRERARDLEKLCREGAGSFR
SRPPTLSLTQCGASEDVTSDEERMVICEEEGDDDVMEDSCPEGSIDLKCKERVTDSDEDE
PDGQRAFQPVVRSSLPYATSTSHADSHSDSTKGNTGGSTGESSERKRKRGMEGGEEGSGE
SKRGGGGGQVPSNSIPGSAPFTSTPALGYGLTQVLGAVRMAPTMVTNVVCPIASTPIPIT
SKPMEGPIALSALPGEKKATLLIGGPGAVGGPITSGGGYLSSSSPNPVSVGPGGMQVTSL
VLGGAFPNQSIQLIAPPQPLLSPTHSALPLPLPLLQPQFLPAASLTSAGRAKPGLTQVQY
ILPILSSVSANPKSPSPQLTQQPTGVLTLPSTPSTHVSQTNGIHSGAGAGIRYAAVGGVS
PGARVQAQSPVLQSKMLVPMATVRTGSTPPQPISHVAPPLPVQNGALPGNKIIQIAPMPM
VQTNVHPAGAVHPGSPFPVSMATATVMTPGIKPPQNVLLTSPPTRITYVQSSTGVVSTAT
VQAPLSPGPAYLPSSLTTLGFTAIAPAGQALMQPLVAGQPPLLAPALSPGAPGTGRQLLT
AIYPAPSITLASGVVAMTSVPPNLAQEVSGQSSPSAVGVQGSKDVTRSHEEGMPHLTAEM
EQKPQVEGQAQRKNKAQIKKEGIKKETPTEDVEAYSKTGANSMAMSSSNIPTGSEEDGGR
ASHMKEENTDHDRDYARGNGEREIKKESGTPEPEESREAEDWPHDGHNKGDSGNGGHNKE
AGPREPLHPPTGLDPPPPPPQTERDTPPSAKKTKFRPPPLKKPSDVVEKVLSGSYFEERF
AELPEFRPEEVLPSPTLQSLATSPRAILGSYRKKRRNSTDLDSSAEDPSSPRRKTAARSR
LSSCSSEPNTPKSEAKCEGDIFTFDKAGAESEDVLGEMDKVPYSSLRRTLDQRRALVMQL
FHEHGFFPSAQATAAFQARYSDTFPTKLCLQLKIREVRQKIMQTATPGTPGISEPGGSTT
GVMGSTDSASAAIGSSNTNTRDGTGTEPGERGRSPEEPRNVGKL
NT seq
7695 nt
NT seq
+upstream
nt +downstream
nt
atgaagccgattaaaaagcaaggaaggcgctcgcccccgtcgacccgagccaaagggggg
aagagacgggggacgggggacagtggagagaaaagagactcggacgagaacagagaccga
tcccccaaaagtcagacctcaccccaaacctcatctcactcagagtcttctcaggaggag
tcggtgacactcacaacgatggccacgccagagagggagggccacagagaggggccccgg
ctcccagagacagcggccgcagcagcagcttccctccctgggaagtcggaggactcccgc
ccggggagcgtcaagtcgctgagcgcccacagcacagacagcagcagcagcgccgccagc
gctgccaacagccccaacccctcgtccaaccgcaagacggccaccttcaaggcccgcgtc
cccaagaagaagtacacctctgagcactgtgctgccgccgccgctgccgccgccaaccac
ggtaaccccggcaacaccggcgcgcctccactgaacagaaatagtgctcactgtgacagt
aacgccggaagtcagttgtccagcttatcttcggggcccgggtcggtggcgagtgagggc
ggttcgctcactgacatcaacagtcagaccaggagaccagtggaggactacattaccact
gtagctccaccacaggacagggacaacacacctggaccccctcccacaggggacagagac
aggagaggcccagagggaggcagagaaatctcccccagccctgtccgctgctcctctaca
gacacggccagcgaacacgacctggacgtgagcgagccacaccgctcaaactctcaccac
accaaccccaccaccgaagcacacaccctggccctggtgcaacgtagcaccccgcgcact
ccgaccccacagagcctgtcggacgcgctcgccgacgccctggccaaaggtctaaagaac
cagcgggtgctagccaggcaggctcggaggaggactgggaagggggaagaggagaacgga
aggggaggggggagggagagcatggactctgtgttcagagcgggcgtggtgcggcgggtg
agcggcgagcacggcagcctggaggtgcagctgaacggtgagaaggagctttaccgctac
ccgttccgtgagggcgcccagggacccgtggacattatcatggacgccccgccgcccggc
tcccaagccgtccccatcggcacccctgtgtgcgtgcccttcggaggtaacgaggacggc
ggcaccacagaagcccagcgccagtggtaccgagagggcctggtcacccaggtggactcc
cacccggctgtgtcctacccatatagagtgttgttagaggatagagtgcccccaggggat
gaggaaggggatggcagggtgggcactccgaccgctgtgtgggtgtcccgtcagagcctc
cgcctgctggtgcccccctgggacctggacctgggaccctgcggaggggggcgagaggaa
agcgatgccgccgccaagagagggcgagagagggagagagagaaagaggacagggacgag
atagaggtggagcaggagctgtgtcgcctcagccgcgggatggggctcagcgcagctgtc
gctgggtccgtgttggggaggctttcataccctggaacggcccccgcctcctcgtcttcc
tccactgtcagctcccccgtcacccccgcctcggtgctgagtctggtgcccggaagagac
tgggagcgagagaaggacctggtggagagagagcggaaacaagagagagataaccgagag
agggccaagcagcaccaccacttcatgcccctgacccccgaggaggacatagaggtgtcc
cacttcagcatggtgcccatgggggcggcgggaggggcggccaaggccctgacggtgtcc
cagcacaggcacatactctccaagccgcccccgggctacctcagcccccacctgtccgtg
gtccggagcctcggaggcaccccgctagtgggcccccacctggccctcaacccccaccca
cctccctcccccacggtgctactggggctggagtcgggagccctggcagcgggggcggcc
gtcatcgccacccctcagctccctcctctgtcctcctcgtcctcccgcggctccctggat
aagccgccctcttcaaactccaactcccacggtgcatctggagggggtggaggctcgtgc
tcgagttcgacgtcctcgtcgcgctcccgcaccccgctcacggcggcccagcagaagtac
aagaagggcgatgtggtgtgtacccccacgggcatccgcaagaagttcaacggcaagcag
tggaggaggctgtgctccagagagggctgctctaaggagtcccagagaagaggctactgc
tcgcgtcatctctccatgagaactaaagagatggaggccagcggagggggcagagaccgt
ggcggggccagcagtacgggcaccctaaccccgtcagacctgaggctgggcggcggccgg
accagttcggagttcgactgggacaacacgtcgcgagacagcagcgaagcgagcagtagg
ggaggggattcacgcccccgcctggtcctgccctcgctcctgccccaggacttatcacgc
ttcgactttgatgagtgcgaggcggccacaatgctggtatctctgggcagctcccgctcg
ggcacgccttccttctctcccatctccaaccagtcgcccttctcgcccacgccgtcgccc
tcgccttccccgcttttcgtcttccgcccggccaccttcagccccatcacggcgccacct
tcgctcacccctcgccgccaccgccacctgagcggcactaagatgggcacgccgggctcg
gagcgcgagcgccacctgtcgggcatcgtacccaccttccagaccaacctcaccttcacc
gtgcccatgagccccagcaagcggaaacttgatgcccttcctccacccctgcccctctct
gcccaggattacgccaagcccgaccagcagttaggggagactattggcctcagcccagcc
gccttcagggtgctctcccctcagagccagcccaccaccccctcctccctctccttcccc
cggccccggagcgccaccagccgccccccatcctccgccgcttccacccccccgccaatg
ctggtgtcccccacccctccctcccccctgccccaggaccccagtccccgccgcgtcgtg
cccctgcgagactcccccgtcatcgtgcggaaccccgacgtccccctggccaagttcaca
gatggacccctggtgaggaggggaggaggaggccgctcctccagagagcacagccagccc
ctgcaccttgccaccggcctccaagcacccgtgcccatcaacggcgccgccaccaatggc
gcagtcctcctgcgaaaccccgcctccacccttgtccttgtaacctcctcccagtccctg
accccagccgtcgccggacaccctgcccactccagccccaccctcagtggtgactccgcc
tccatctcctctactggctccgccctctccagctctggatcaggaggtagggagtgggag
aggaagcccggcgggcaccaggatgccattggaggggcattgccccagccggtagcctgc
cacccctctccaactgccctgctgcccctcatcctaccagccgagtcccctcaccctgca
ccccgcaaggacatcatcattggacggcccgggacagtatggaccaatgtggagccccgt
tcagtgccagtgtttccttggcattcattggtccctttcctggagcccagccaatcgagt
gcggctgcccagcccgctgatggccaacagcttgtcaatcagagaaaagagcctcgttgt
ggggtggccctagtgagtgacggatgggtgggtccaccagacgcagagcaagggtctcca
tcccgcccaccgccctcctccaatgacaacgaccccccagctggaagagcagaaagaggt
ggagccgacagcgagactgagagcgacgcggacgacccgttttttccgggtgtagccaat
gaccctgccccgtctacgggccctatcaagaggcgcactcagtccctcagcgcccttccc
aaagatggagacagaaagagggaaaaggaccacattcggcggccgatgaacgcattcatg
attttcagcaagcgtcaccgggcgctggtgcaccagaggcaccccaaccaggacaaccgc
acggtcagcaagatcctgggcgagtggtggtacgccctggggcccaaagagaagcagaag
taccacgacctcgccttccaggtgaaagaggctcacttcaaggcccacccagactggaag
tggtgcaacaaggacaggaggaagtctatctctgagggccgagagaccccaggggccaaa
gaggcacgcgagaggagcatgtcggagagcacagagcctgagtcagtgtctcagggcatg
gaggtgaagggtgcggcaggcccggactggcctgggggttctgagcgtcatgcgggggcc
tacagtggccagctccctcgcccccgggccttctcccagagtgcagtacacagcctggag
aggagggagcgggccagagatctggagaagttgtgtcgagaaggggcaggctcattccgc
agccgcccccctactctctccctgacacagtgtggggccagcgaggacgtgaccagtgac
gaggagcgcatggtcatctgtgaggaagagggggacgatgatgtcatggaggactcgtgc
cctgagggatccatagacctcaagtgtaaagagcgagtgactgacagtgacgaggatgag
ccggatggacagcgagccttccagccagtggtccgctcctctctcccctatgccaccagc
acctcccacgccgactctcactccgactctaccaaggggaacacaggggggagcaccgga
gagagctctgagaggaagagaaaacgagggatggagggaggagaagagggaagtggagaa
tccaaaagaggaggtggaggggggcaggttccctctaattccatccctggatcggcgccc
ttcacctcgacccccgctctgggttatggactcacccaggtgctcggtgcagtccggatg
gcccccaccatggtgaccaacgtggtatgccccatcgccagcacgcccatccctatcacc
agcaagccaatggaaggccccatcgccctcagtgccctccctggggagaagaaagccacg
cttctgattggaggaccgggagcagtaggcgggcctatcacatcagggggtgggtacttg
tcctcatcctctcccaatcccgtgagtgtggggccgggggggatgcaggtcaccagtcta
gtgctgggaggcgctttccccaaccagtctatacagctcatagccccgcctcagcctctc
ttaagccccacccacagcgccctgccacttcccctccccctgctgcagccccagttcctt
cctgccgcctctctcacctccgctggcagggccaagcctggcctcacccaggtgcagtac
atcctgcccatcctgtcttctgtcagtgccaaccccaagagcccctccccccagctaacc
cagcagccaaccggcgtcctcacgctgccctccactccgtccacccatgtctcccagacc
aatggaatacattcgggggcaggagcgggaataagatatgccgcagtgggaggggtcagt
cctggagcaagagtccaagcccagtctccagtcttgcagagcaagatgttggttcccatg
gcaacagtgagaacaggctctactcctcctcagcccatctcccacgtggcccctcccctt
cctgtgcaaaatggtgctctaccaggaaacaagatcatccagatcgcccccatgccaatg
gtccagacaaatgtccaccctgctggagcagtgcatcctgggagtcccttccctgtatcc
atggcaacagccactgtgatgactccgggcatcaaaccccctcagaacgtgttgctgacc
tcgcctccaacaaggatcacttatgtccaatccagcactggagtggtctccacggcaacg
gtccaggcccctctctcgccaggacccgcctacctgccatcgtccctgacgactctgggc
ttcaccgccattgctccggccggccaagccctgatgcagcctctcgtagcgggccaaccg
cccttgctagccccggccctttcccctggagccccggggaccggacgtcaactcctcacc
gccatctacccggccccaagcatcaccctggcgtcaggtgtggttgccatgacctccgtg
cctcccaatttggctcaagaagtgtccggccaatcgtcaccctcggctgtcggcgtccag
ggttcaaaggacgtgacccggtcacatgaagagggaatgccacacctgactgcagagatg
gagcaaaagccacaggtggagggccaggcccaacggaagaacaaggctcagataaagaaa
gagggcataaagaaagagaccccgacggaggatgtcgaggcatatagcaaaaccggtgct
aactcaatggctatgtccagcagcaatataccaacagggagtgaagaagacggtggtcga
gccagccacatgaaagaagagaatacggaccatgaccgagattatgccagagggaatggg
gagagggagataaagaaggagagtgggacgcctgaaccagaggagtccagggaggcagag
gattggccccatgacggccacaacaaaggggacagtggcaacgggggccacaacaaagag
gctggaccgagggaacctctccaccctcccacaggactggaccctcctccgcctccccca
cagactgaaagggacacgcccccctcagccaagaagaccaaattccgcccccctccactc
aaaaagccctcagacgtcgttgaaaaggtcctgtcggggtcctatttcgaggagcgcttt
gccgagctgccagagttcaggccagaagaggtgctgccctctcccaccctccagagtctg
gccacctccccccgagccatactgggcagctaccggaagaagaggaggaactccacagac
ctggactcgtctgcagaggaccccagctctcccaggaggaagactgcagctcggagccgt
ctctccagctgcagctcggagcccaacacaccaaagagcgaggccaagtgtgagggggac
atcttcaccttcgacaaagctggtgctgagtctgaagatgtcttgggggagatggacaaa
gtgccgtactcctctctccggaggactctggaccagcgcagggctctcgtgatgcagctc
ttccatgaacacggcttcttcccttcagctcaggccactgcagccttccaggcacgctac
tcagacaccttccccaccaaactgtgtctgcagctgaagatcagggaggtgaggcagaag
atcatgcagacagccacgcctgggacccccggaatctctgagcccggcgggtcaacaaca
ggggtcatgggttcaacggactcagcctcggccgccatcggttcctccaataccaacact
cgagatggtacagggacagagccaggagaaagagggcggagtcccgaggagcccaggaac
gtgggcaaattgtag
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integrated database retrieval system
