Salmo trutta (river trout): 115173530
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Entry
115173530 CDS
T08542
Name
(RefSeq) POU domain, class 2, transcription factor 2-like isoform X1
KO
K09364
POU domain transcription factor, class 2
Organism
stru
Salmo trutta (river trout)
Pathway
stru05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
115173530
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
stru03000
]
115173530
03021 Transcription machinery [BR:
stru03021
]
115173530
Transcription factors [BR:
stru03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
115173530
Transcription machinery [BR:
stru03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
Octamer transcription factors
115173530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pou
Homeodomain
HTH_31
Motif
Other DBs
NCBI-GeneID:
115173530
NCBI-ProteinID:
XP_029587565
LinkDB
All DBs
Position
34:complement(10107988..10187214)
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AA seq
687 aa
AA seq
DB search
MFVPLPVPFVFQRTASDFSAWRLKSPLALRSSSDIRMSKPAEDEKPGADFPGESTDSERN
SPDANDQVQPMKTSPFSLSPTFSSIKSKSEAGPEMISTHVPPPSQQQTPHPHTQLMLAGS
QLAGLAALLPAQQQLLLQQAQAQLLAAAVQQSNAAHAAHAAHAAAQANQQQQQQQLTKQE
QAPPQLTLSQPIQLTAQDIQQLLQLQQLVLMPGHHLQSPQFLLPQAQGQQGQQGKWDLLS
LLSTPNLISLPQHQQSQGSLLTTPPRLGLQAQRRQGDGLSSLQRDKSGDGGVTSGASAAP
MTSVTSGPHGEEPSDLEELEQFARTFKQRRIKLGFTQGDVGMAMGKLYGNDFSQTTISRF
EALNLSFKNMCKLKPLLEKWLNDAETMAIDSMLPSPNSLSSPMMGFEGMTGRRRKKRTSI
ETNVRVALERNFILNQKPNSEEILLMGQQLNMEKEVIRVWFCNRRQKEKRINPCSATPPL
PSQPPSMTHKPPCYSPHMVSSQGLHQAATSLSTTVTSPLPSVTCPLTVCGSAATSSTPSS
RTPPPHSTASPAPPTLSTHSLNAGNTMMGVSTGMNQALVSSNPLATMQALAASGGQLPIS
SLEAGGQMILGGAGVRPSLFLNRHTLLPMASHQAGVGLVGGHRGASPSPGASGMDVDSCS
ASPCSSPASFGSFSEASPLPLGGAMAE
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atgtttgttcccttgccggtgccgttcgtctttcagagaactgcttccgacttcagcgcc
tggcgtctcaagtcaccgctggctctacgctccagctccgatatcaggatgtcaaaacca
gcagaggatgagaagcctggggcagactttccaggggagagcacagactccgagaggaac
agtcctgatgccaatgatcaggttcagccaatgaaaacgagtcccttcagtctttctcct
accttcagcagcatcaagagtaaaagtgaggcgggacctgagatgatctccacccatgtg
ccgcctccttcccagcagcagacgcctcaccctcacacacaactcatgttggcagggagt
cagctggcagggctggctgccctcttgcctgcacagcagcagctgttgcttcagcaggcc
caggctcagctcctggccgccgccgtgcagcagtccaatgcggctcacgctgctcatgcc
gcccacgcagccgcccaagccaatcagcagcagcagcagcaacagctgaccaaacaggag
caagccccgccccagctcaccctctctcagcctatccagctcaccgcccaggatatccag
cagctgttgcagctgcagcagttagtcctgatgcccggccaccacctgcagtctcctcag
ttcctcctgcctcaggcccagggacaacaggggcagcagggtaagtgggacctactaagt
ttgctctcgacacctaatttaatttcgctacctcagcatcagcaaagccaggggagtctt
ctaactactccacccaggctgggactgcaagcacagcgtcgccaaggtgacggcctctca
tcattacagagggacaagagcggggatggcggggtgacctctggggcctcggcagcccca
atgacctcagtgacctctggccctcacggcgaggagcccagtgacctggaggagctggag
cagttcgcccgcaccttcaaacagagacgcatcaaactgggcttcacacagggtgacgta
ggcatggcgatggggaaactgtatgggaatgacttcagccagaccaccatctctcgcttc
gaggccctaaacctgagctttaagaacatgtgcaagctcaagcctctgcttgagaagtgg
ctaaacgacgcagagaccatggcgatagacagcatgcttcccagcccgaactctctctcc
tcccccatgatggggtttgagggcatgacggggcgccgcaggaagaaacgcaccagcatt
gagaccaacgtccgcgtggccttagagcgcaacttcatcttgaaccagaagcctaactca
gaggagattctcctgatgggccagcagctcaacatggagaaggaggtgatccgggtctgg
ttctgcaaccggcgccagaaagagaagcgcatcaacccttgcagtgccacccctcccctg
cccagccagcccccctctatgacgcacaaacccccctgctacagcccgcacatggtgtcc
agtcaggggctgcaccaggctgccaccagcctcagcacaacagtgaccagtccattaccc
tcagtgacctgccctctgaccgtctgtggctctgcagccaccagctccaccccctcctct
aggactccgcctccacatagcacagccagccccgctcctcccaccctcagtacccacagc
ctgaacgctgggaacacaatgatgggagtaagcacagggatgaaccaggctctcgtcagc
agcaatcccctggccacaatgcaagctctggctgccagtggtgggcagctgcccatttcc
agtcttgaggccggaggtcagatgatcctgggcggggctggggttcgcccctccctattc
ctcaaccgccacaccctcctgcctatggcgtcccaccaagccggcgtgggattggtcggc
ggtcacaggggagcctctccatcccccggcgccagcggcatggacgtcgactcctgctcc
gcctctccctgctccagccccgcctccttcggctcgttcagcgaagcctcaccgctgccg
cttggcggggccatggccgagtga
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