Salmo trutta (river trout): 115173531
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Entry
115173531 CDS
T08542
Name
(RefSeq) eukaryotic peptide chain release factor subunit 1-like
KO
K03265
peptide chain release factor subunit 1
Organism
stru
Salmo trutta (river trout)
Pathway
stru03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
115173531
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stru03019
]
115173531
03012 Translation factors [BR:
stru03012
]
115173531
Messenger RNA biogenesis [BR:
stru03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
115173531
Translation factors [BR:
stru03012
]
Eukaryotic type
Release factors
115173531
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
acVLRF1
baeRF_family10
Ribosomal_L7Ae
Motif
Other DBs
NCBI-GeneID:
115173531
NCBI-ProteinID:
XP_029587572
Ensembl:
ENSSTUG00000000159
LinkDB
All DBs
Position
3:33406145..33413375
Genome browser
AA seq
443 aa
AA seq
DB search
MADDPNAADRNVEIWKIKKLIKSLEAARGNGTSMISLIIPPKDQISRVAKMLADEFGTAS
NIKSRVNRLSVLGAITSVQQRLKLYNKVPPNGLVVYCGTIVTDEGKEKKVNIDFEPFKPI
NTSLYLCDNKFHTEALTALLSDDSKFGFIVIDGSGALFGTLQGNTREVLHKFTVDLPKKH
GRGGQSALRFARLRMEKRHNYVRKVAETAVQLYVSNDKVNVAGMVLAGSADFKTELSQSD
MFDPRLQAKILKLVDISYGGENGFNQAIELSAEVLSNVKFIQEKKLIGRYFDEISQDTGK
YCFGVEDTLKALEMGAVEILIVYENLDTMRYILRLHGAESIGTENDEKTLYLTPEQEKDK
SHFTDKETGQDHELIESMPLLEWFANNYKKFGATLEIVTDKSQEGSQFVKGFGGIGGCLR
YRVDFQAIDYQAEDDEFFDLDDY
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgaccctaacgcagcggacaggaacgtggagatatggaaaatcaagaagttg
attaaaagtttggaagctgcccgaggtaatggaaccagtatgatctcgctgatcattccg
cctaaggaccagatctccagagtggccaagatgttagctgatgagtttgggacggcctcc
aacatcaagagcagagtcaacaggctttctgtgctcggggccattacctctgtacagcag
agactaaagctatacaataaggtgccccctaatggcctggtggtgtactgtgggaccatt
gtgacagatgagggcaaagagaagaaagtcaacatagactttgagccttttaaacccatc
aacacctctctgtacctctgtgacaacaagttccacactgaggcgctgacggccctgctg
tccgatgacagtaagtttggtttcatagtgatcgatggtagcggggctctcttcgggaca
ctccaggggaacaccagagaggtcctgcacaagttcaccgtggacctgcccaaaaaacac
ggcagaggaggtcagtctgctctgcggtttgcccgtctgaggatggagaagagacacaac
tatgtgaggaaggtggctgagacagctgtccagctctatgtgtccaacgacaaggtcaac
gtggccggaatggtcctagcagggtctgccgacttcaagactgagctcagccagtccgac
atgtttgaccctaggttacaggcgaagattctgaagttggtggacatctcgtacggagga
gagaacggcttcaaccaggccatcgagctgtcggcagaggtcctttccaacgtcaagttc
atccaggaaaagaagctcatagggcggtactttgatgagatcagtcaggacacggggaag
tactgttttggggtggaggacacactcaaagccctggagatgggagctgtggagatcctc
atcgtctatgagaacctggacaccatgcgttacatccttcgcctgcacggggccgagagc
attggaacagagaacgatgagaagactctgtacttaacaccagagcaggagaaagacaag
tcccacttcacagataaggagactgggcaggaccacgagctgattgagagcatgcctctg
ctggagtggttcgccaacaactacaagaagtttggagccacgctggagattgtcacagac
aagagtcaagaaggctcccagtttgtcaagggcttcggaggcatcgggggatgcttgcgg
tacagggtggatttccaggccatagattaccaggcagaggacgatgagtttttcgattta
gatgactactag
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integrated database retrieval system
