Salmo trutta (river trout): 115173543
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Entry
115173543 CDS
T08542
Name
(RefSeq) tapasin-like
KO
K08058
TAP binding protein (tapasin)
Organism
stru
Salmo trutta (river trout)
Pathway
stru05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
115173543
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Gene cluster
GFIT
Motif
Pfam:
ig
Ig_3
V-set
C1-set
I-set
Ig_2
Motif
Other DBs
NCBI-GeneID:
115173543
NCBI-ProteinID:
XP_029587592
Ensembl:
ENSSTUG00000032719
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Position
34:complement(10495783..10500611)
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AA seq
442 aa
AA seq
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MANISTIYKLSFLAFTYFIHVYGTSCPVLECWFVQEKPGRGGGFPAAMIQEKSLLYINTD
PESEETKSQQGPSADINHDRVYYVTDPAAILCSSSLHPPEGSVHKPQCEINPFMPQPSTV
QWVVPLTDSAHSPIYLQADWYSAALQGLDGQLGLSSVMRAPTATKEPTVVLSVSSRTPLV
RSRLGEPVVLDCGFWMDASSPLSGSGFAVEWRYQFRGDGRLVLAYDGKTDRFAETQEEGV
GLDFTALHETGNASLILQEAQVRHTGTYICTVYLPYLLAQVAVELEIVEPPSLSIFPSPL
PLSMPGQVVKVQCEASGFFPLSLEFHWELTGPDGKVRPLGQGSVTGHRQGPDNTYSQTSR
LELDSAKLDLGRGGEVTCVAVHPGGTRRASVTLNVIGINGPSIEDSMAMVAVALGLYGLI
KIVSWTFTSGSDDTNSQEKKVK
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atggccaatatttcaacaatttacaagctatcgtttctcgcctttacttacttcatacac
gtctatgggacaagctgtccagttctggagtgctggtttgtccaggagaaaccaggtcga
ggtgggggattccctgctgcaatgattcaggagaagtcactactgtatatcaatacagac
ccagagagtgaagaaaccaagtcacagcagggaccatctgcagacatcaaccatgataga
gtctactacgtcactgacccagcagccatcctctgcagttcctctctgcacccaccagag
ggctcagtccataaaccacagtgcgagataaaccccttcatgccccagccctccaccgtt
caatgggtagtcccgctcactgactctgcccacagtcctatctacctgcaagctgactgg
tactctgcagccttgcagggccttgacggacagctgggcctgtccagtgtcatgcgtgct
cccacggcaaccaaggaacccactgtggtgctcagtgtgtccagtagaacccccttggtc
cgttccagactcggggaaccggtggttctagactgtgggttttggatggatgcctcttct
cctctctctggctctggcttcgccgtggagtggcgctaccagttcaggggtgatggccgt
ctggtcctggcctacgacggcaagacagaccgatttgccgagacccaggaagagggagtg
gggctagacttcacggctctgcacgagacaggaaatgcatcactgatcctgcaggaagct
caagtgcgccacacaggaacctacatctgcacggtgtacttgccctatctcctggctcag
gtggcagtggagctggagattgtagagcctccgtccctctccatcttcccctccccgctc
cctctctccatgcccggccaggtggtgaaggtgcaatgcgaggcgtcaggattcttcccc
ctctccctggagttccactgggagttaacagggcctgacggtaaggtcaggcccctgggt
cagggcagcgtgacaggccacaggcagggcccagacaacacctacagccagacctcccgt
ctggagttagactcagccaagctggaccttggccgtggaggggaggtcacctgtgtggcc
gtccatcctggaggcacccggcgggccagcgtcaccctcaatgtcatcggtattaatggt
ccctccattgaagactccatggcgatggttgccgtggccctggggctctatggtttgatc
aagatcgtctcctggacatttacctctgggtccgatgatactaactcacaagagaagaaa
gtgaagtaa
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