Salmo trutta (river trout): 115173548
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Entry
115173548 CDS
T08542
Name
(RefSeq) antigen peptide transporter 2-like
KO
K05654
ATP-binding cassette, subfamily B (MDR/TAP), member 3 [EC:
7.4.2.14
]
Organism
stru
Salmo trutta (river trout)
Pathway
stru02010
ABC transporters
stru04145
Phagosome
stru05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
115173548
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
115173548
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
115173548
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
stru02000
]
115173548
Enzymes [BR:
stru01000
]
7. Translocases
7.4 Catalysing the translocation of amino acids and peptides
7.4.2 Linked to the hydrolysis of a nucleoside triphosphate
7.4.2.14 ABC-type antigen peptide transporter
115173548
Transporters [BR:
stru02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB2, 3, 8, 9, 10 subgroups
115173548
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
ABC_ATPase
Rad17
AAA_16
AAA_30
AAA_25
AAA_29
RsgA_GTPase
Motif
Other DBs
NCBI-GeneID:
115173548
NCBI-ProteinID:
XP_029587596
Ensembl:
ENSSTUG00000032985
LinkDB
All DBs
Position
34:10586942..10591404
Genome browser
AA seq
726 aa
AA seq
DB search
MTKMMLRTCAFAMAVGLCIDITTLAFGASISKTGPRTFDAFGNVVRQWVVAGIRLVLLLG
LTLLTLGSIKPVFKRWLAVHCFLAPVYETGRRMLYGSSPERVYGSLGLGSPSLWLLCTVA
AAAAALFWETTFPDSNGESNGKQKTQKARVLFMRVLYFYRPDTLLLVGAFIFLSLAVLCE
MFIPFYTGKVIDILGTQYKWNNFLTAIILMGLYSLGSSFSAGCRGGLFMCAINSFTCRMK
VKLFGALVKQEIGFFETIKTGDITSRLSTDTTLMGRAVALNVNVLLRTLIKTVGMLSLMM
SLSWKLTLLMLMETPITGLLQSVHDNYYQRLSKEVQDSMARANEAAGETVGGIRTVRSFK
TEQHEAGRYNDRLMDTHNLKTRRDTVRAVYLLLRRLTAVVMQVAMLYYGRLFIQRGQMST
GNLVSFILYQSDLADNIRTLIYIFGDMLNSVGAAGKVFEYLDREPQVSTKGTLQPETLTG
HVQFHNLSFSYPTRQERKVLQGFSLELRPGQLTALVGPSGGGKSTCVSLLERFYQPQQGE
ILLDGLPLQSYQHHYLHRKIAMVGQEPVLFSGSIKDNIAYGLADCSLERVQEAARRANAH
SFISQLEKGYDTDVGERGGQLSGGEKQRIAIARALIREPQVLILDEVTSALDTESEHMVQ
EALASCPSQTLLVIAHRLKTIERADQIILIGQGTVLEQGTHQELMDRKGSYYKLKERLFT
EDDAPH
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaaatgatgcttagaacgtgcgcgttcgctatggctgtaggtctatgcattgac
ataaccacattggcttttggcgcatctatttccaaaactggaccaagaacttttgatgct
ttcggaaatgtggtgcgtcaatgggttgtagcggggattcggttagttctactactcggt
ttaacgctactcacactaggatcgataaaacccgtattcaagcgctggttagcggtgcac
tgtttccttgccccggtctatgagactgggcgacgtatgctgtatggaagttcaccagag
cgcgtgtatggatctttgggtctggggagtccaagtttgtggctattgtgtaccgtggca
gcagctgcagcagccttattttgggagacaaccttccctgacagcaatggagaaagtaac
gggaaacagaagacgcagaaggcacgagtgctgttcatgagagtcctgtacttctacaga
cctgacaccctccttttggttggggcatttatattcctgtcactggctgtcctctgtgag
atgttcatcccattctacactggaaaggtgattgacatcttgggtacccagtacaagtgg
aataactttctcacagcaatcatcctcatgggtctttactctttgggaagctctttcagt
gcaggctgtcgtggaggcctcttcatgtgtgctatcaacagcttcacctgcagaatgaaa
gtgaagctgtttggggccctggtgaagcaggagatcggcttctttgagaccatcaagaca
ggtgacatcacgtcccggctgtccacagacaccaccctgatgggccgggcggtggccctg
aatgtcaacgtcctactgaggaccctcattaagaccgtgggtatgctgtcgctcatgatg
agcctgtcctggaagctcactctgctcatgctgatggagacgcccatcaccggcctgttg
caaagcgtccatgacaactattaccagaggctctctaaggaggttcaggactctatggcc
agggcgaacgaggcagcgggggaaacagttggcggaatccggaccgtacgaagcttcaaa
actgagcagcatgaggctggtcgttataacgacaggttgatggacacccacaatctcaag
accaggcgggacaccgtcagggcagtctacctgctcctgagaagactaacagcagtggta
atgcaggtggccatgttgtactatggcagactgtttatccagcgaggtcagatgagcact
ggcaacctggtctctttcatcctctaccagtctgatctggcagacaatatcaggactttg
atttacatttttggcgacatgctgaattcagtgggggcagctggtaaggtgtttgagtac
ctggacagagagccccaggtcagcaccaaggggaccctccaaccagagaccttgactgga
cacgtccagttccacaacctctccttctcctaccctacccgccaggaacgcaaagtactg
cagggcttctctctggagctgaggccgggtcagctgactgctctggtggggccatcaggg
ggggggaagagcacctgtgtcagtctgctggagaggttctaccagcctcagcagggagag
atcctattggacggactgccactgcagagttaccagcaccactacctacacaggaagata
gccatggtaggccaggagcctgttctgttctctgggtccatcaaggacaacattgcctac
ggcctggcagactgctctctggagagggtacaggaagctgctcgcagagccaatgcccac
agcttcatcagccaactggagaagggttacgacacagatgtaggagagcggggaggtcag
ctgtccggcggtgagaagcaacgtatcgccatcgccagagctctgatcagagagccacag
gtcctcatcctggacgaggtcaccagcgcactggacacggagagcgaacacatggtccag
gaggccctggctagctgcccctcccagacgctgctggtgatcgctcacaggctgaagacc
attgagagggcggatcagatcattctgattggccagggaaccgtcctggagcagggcact
caccaggagttgatggacaggaaggggagctactacaaactaaaagagagactcttcacc
gaagacgacgcgccacattga
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