Salmo trutta (river trout): 115173559
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Entry
115173559 CDS
T08542
Name
(RefSeq) E3 ubiquitin-protein ligase RING2-A-like isoform X1
KO
K10695
E3 ubiquitin-protein ligase RNF1/2 [EC:
2.3.2.27
]
Organism
stru
Salmo trutta (river trout)
Pathway
stru03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
115173559
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
stru04121
]
115173559
03036 Chromosome and associated proteins [BR:
stru03036
]
115173559
Enzymes [BR:
stru01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
115173559
Ubiquitin system [BR:
stru04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
115173559
Chromosome and associated proteins [BR:
stru03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Canonical PRC1 (PRC1.2/1.4)
115173559
Noncanonical PRC1 (PRC1.1)
115173559
Noncanonical PRC1 (PRC1.3/1.5)
115173559
Noncanonical PRC1 (PRC1.6)
115173559
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RAWUL
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-C3HC4_3
zf-RING_UBOX
zf-Nse
zf-C3HC4_4
zf-RING_6
zf-RING_4
zf-RING_5
RING_XB3-XBAT31
zf-rbx1
DUF4653
zf-UDP
DUF6437
TRAF3_RING
zf-C3HC4_5
Sina_RING
Motif
Other DBs
NCBI-GeneID:
115173559
NCBI-ProteinID:
XP_029587636
Ensembl:
ENSSTUG00000035303
LinkDB
All DBs
Position
34:10786040..10789309
Genome browser
AA seq
391 aa
AA seq
DB search
MATPVNIQNPSKTWELSLYELHRSPQEAIMDGTEIAVSPRSLHSELMCPICLDMLKNTMT
TKECLHRFCSDCIVTALRSGNKECPTCRKKLVSRRSLRRDSNFDALISKIYPSRDEYEAH
QDRVLERLNRLHNKQALSSSIEEGLRMQALHRRPRAQRVRKPAQESDNTTFSGGEDNGDA
RSHLSHDSAPSHAPLPPSHTPSEAGPSRNPKRPRVSDESGPEVDGGSPTAPLRHHKEGPG
SEIELVFRPHPLLVNTQDYSQTRYVKTTANATVDHLSKYLALRIALEERQRDSQSDAAME
KGKEGVEAGAKGEKSAGGASLKNVSEKQYTIYITTSGGQFSTLNGSLTLELVNEKYWKVR
KPLELYYAPTKDQPLQPSQPPQQKSPQPKEG
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atggcgactccagtcaacatccaaaaccccagtaagacgtgggagctgagcttgtatgaa
ctgcacaggagcccacaggaggcgatcatggacggcacagagatagcggtgtccccccgg
agcctccacagtgagctgatgtgccccatctgtctggacatgctgaagaacaccatgacc
accaaggagtgcctgcaccgcttctgctccgactgcatcgtcactgcactccgatcaggg
aacaaggaatgccccacgtgccgaaagaagcttgtgtctagacgctcgctccgccgcgac
tccaactttgacgctctcatctccaagatctaccccagccgtgacgagtacgaggcccac
caggaccgggtgctggagagactcaaccggctgcacaacaagcaggccctcagctccagc
attgaggaggggctgcgcatgcaggctctgcacagacgccccagagcccagcgagtgcgc
aaaccggcgcaggagagcgacaacaccaccttcagcggcggcgaggacaacggggatgcg
cggtcacacctctcccacgactctgcgccctcccacgcgcccctccccccgagccacaca
ccctctgaggccgggcccagccggaaccctaagcggcccagggtgtcagatgagtcaggc
ccggaggtggatgggggcagccccacggccccgctccggcaccacaaagagggccctggc
tcagagatagagctggtgttccgcccacaccccctgctggtcaacacacaggactacagc
cagaccagatatgtgaagaccacagccaacgccacagtggaccacctgtctaagtacctg
gctctgcgtatcgctctggaggagaggcaaagagacagccaatcagatgcagcgatggag
aaggggaaagagggagtggaggcgggggctaaaggagagaaatcagcaggaggggccagc
ctgaagaacgtcagtgagaagcaatacaccatctacatcaccacatcagggggccagttc
tctactctgaacggctccctgactttagagctggtgaatgagaagtactggaaggtcaga
aagcctctggagctttactatgcccccaccaaggaccaaccgcttcaaccatcccagcca
ccgcagcagaagtccccacagcccaaagaggggtga
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integrated database retrieval system
