Salmo trutta (river trout): 115173593
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Entry
115173593 CDS
T08542
Name
(RefSeq) semaphorin-6D-like isoform X1
KO
K06842
semaphorin 6
Organism
stru
Salmo trutta (river trout)
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Gene cluster
GFIT
Motif
Pfam:
Sema
PSI
Motif
Other DBs
NCBI-GeneID:
115173593
NCBI-ProteinID:
XP_029587701
Ensembl:
ENSSTUG00000044501
UniProt:
A0A674DTB6
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Position
34:complement(11591479..11684722)
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AA seq
1034 aa
AA seq
DB search
MVPPKWMRRRLLLAALTLTSCLLFAMATPFPKDLEPINVVGWEHSYLYPGFQGLVSDNDT
ARLGLDFQRMLRINHILYIAARDHVFAVNLTTAGDDFVPQLKLTWRSKDVAKCTVRGRNS
DECYNYVKVLVPRNDETLFACGTNAFNPTCRNYKMTTLEQVGEEVLGQARCPFESGQSNL
GLFAGGDFYSATMTDFLASDAVIYRSLGDDSPVLRTVKYDSKWLREPHFHHAIEYGNYVY
FFLSEIAVEYTTLGKVVFSRVARVCKNDNGGSPRVLERYWTSFLKTRLNCSVPGDSFFYF
DVLQSLTNVLQINQRPAVVGVFTTQANSIPGSAVCAFYMDDIEKAFNGKFKEQKTSDSAW
TPVPEEQVPKPRPGSCAGDGPASAYKSSINFPDDTLTFIKSYPLMDEAVPSVNDRPCFTR
TTSRYKLAQIAVDTSAGPSKDRTVVFLGSEDGRVLKVLSSTHPNASFGSQLLEDIDVYNP
SKCNVQGQEDRRILGMELDKEHHALFVAFTSCVIRVPLSRCTEHGACKKSCLSSRDPYCI
WLRTGSCANMAPGFKAGFDQDIEGDHSLYPENCHADVLATTRIQNSAADSAYGVRRLPDM
EKSSPSVHYTLLIACVLVAFFLGAILSGFLVSCYCSHNARRACRLGKDPEASIHPALSLR
SLAKLNGLLDGQPKEEKLDVSTPKMYSSFIPSGKEHTPERHGMSLGDPDLNLSQGENLSG
LPTPDSTPELPIKNMKAFRNQWERNQNCNNAKESKAPPGTGFSLGSSRSVTQQVFPFSHS
LTNGQALGHLPEERKIPNDERAQGASASHSCCPQTVVDVAALDELLKHIYEVSASGSRSI
TVLTSPCAPLPGSSSSSHNHSSFRSQPQIPETESATYYSSSTLPRDSLTRRLDVPPDAPA
ASSAGATPLQQQSIPERSAVTRHHSQRHLMIKMGNGGAVPRQHSFRQGGVGPPPHQLLTR
MNSGGGGGGGVGCEAHQPLIPSACLTRQHSYSEPPHLHRAAIVRRTASLKPQVPPKPLFL
PATSPVNEQGKYNY
NT seq
3105 nt
NT seq
+upstream
nt +downstream
nt
atggtccctccgaaatggatgaggcggcgtctcctgctggcggccctcacactcacttcc
tgtctactgttcgccatggccacgcccttccccaaggacctggagccaatcaacgttgtc
ggatgggagcactcctacctatacccagggttccaggggctggtgtcggacaacgacaca
gccagactaggcctggacttccagaggatgctgaggatcaatcacatactctacatcgct
gccagggaccatgtctttgcagtaaacctgaccacagctggtgacgacttcgtcccccag
ctgaagctcacatggaggtccaaggatgtggccaagtgtaccgtgaggggtagaaacagt
gatgagtgctacaactatgtcaaagtgctggtaccgcggaacgatgagaccctgtttgct
tgcggcaccaatgccttcaaccccacctgccgcaactacaagatgaccaccctggagcag
gttggcgaagaggtgttgggtcaggcacgctgtcccttcgagtcgggccaatccaacctc
ggcctctttgctggtggtgatttctactctgccaccatgaccgacttcttggccagcgac
gctgtcatctaccgtagtcttggcgacgacagccccgtcctgcggaccgtcaagtacgac
tccaagtggctccgagagccccatttccaccatgcgattgagtatgggaattatgtctac
ttcttcctcagtgagattgcagtggagtacaccaccctgggcaaggtggtgttctctcgt
gtggcgcgggtgtgtaagaacgacaacggcggctctcctcgggtgctggagcgctactgg
acctccttcctgaagacgcggctcaactgctcggtgcccggcgactccttcttctacttc
gatgtgctgcagtcactcaccaacgtgctgcagatcaaccagcgccccgcagtggtggga
gtgttcactacgcaagctaacagtatccctggttcagcagtgtgtgccttctacatggac
gacatagagaaggccttcaatgggaagtttaaggagcagaagaccagtgattcagcctgg
accccagtaccggaggaacaggtgcctaagcccaggcctggttcctgtgccggtgatggc
ccggcctcggcctacaagtcatccatcaacttccccgacgacacgctgaccttcatcaag
tcttacccgctgatggacgaggcggtgccctcagtcaacgaccggccctgcttcacccgc
accaccagcaggtacaagctggctcagattgcggtggacacctctgccgggccgtctaag
gaccgcactgtggtcttcctgggctcggaggatggcagggtcctgaaggtgttgtccagc
actcatcctaacgcatcctttggctcccaactcctggaggacattgatgtgtataacccc
tctaagtgtaacgttcaggggcaggaggaccggaggattctgggaatggagctggataag
gagcatcatgccttgttcgtggccttcaccagctgtgtcatcagagtgccgctcagccgc
tgcaccgagcacggcgcctgtaaaaagagttgtctgtcgtcccgcgacccgtactgcatc
tggctccggaccgggagctgtgccaacatggcgccagggttcaaggctggctttgaccag
gacatcgagggagaccactcactgtaccctgaaaactgccacgcagatgtgctggcgacc
acgcgaatccagaactctgcggcagactcggcctacggtgtccgaaggctccctgacatg
gagaagtccagccccagtgtccactataccctcctgatcgcctgcgttctggtggccttc
ttcctcggcgccatcctctctggcttcctggtgtcatgctactgcagtcacaacgctcgc
cgtgcctgccggcttggcaaggaccctgaggcgtccatccaccccgccctctcgttgcgc
agcctggccaagctaaatggcctgctggatggccagcccaaagaggagaagctggatgtg
tccacgcccaagatgtacagctccttcattcccagcgggaaggagcacactccagagagg
cacggaatgtccctgggagacccggaccttaacctctcccaaggggagaacctctcgggc
ctgcccaccccagactccaccccagagctgcccatcaagaacatgaaggccttccggaac
cagtgggagaggaaccagaactgcaataacgccaaggagtccaaggcaccccccggcact
ggcttcagcctgggttcgtcaaggtccgtcacccagcaggtgttccccttctctcacagc
ctgaccaacggccaagccctggggcacctgcctgaggagaggaagatccccaacgacgag
cgtgcgcagggggcttcggcctcccattcctgctgcccgcagacggtggtggacgtggcg
gccctggacgagctcctcaagcacatctacgaggtcagcgcatcgggcagccgcagcatc
actgtgctgacctcaccgtgtgcccccctaccgggtagctccagttccagccataaccac
agcagcttcagatcccagccccagatccccgagacggagtcagccacgtactacagctcc
tccactctgcccagggacagtctgacccgccgcctggacgtgcccccggatgcccctgcc
gcttcctcggctggcgccaccccactgcagcagcagtccatccccgagcgaagcgcagtg
actcgccatcactcccagaggcacttaatgatcaagatgggcaacggaggggccgtcccg
cgccaacacagcttcagacagggcggggttgggccaccgccccaccaactgctcacccgg
atgaactcgggaggtggtggcgggggaggggtcggctgtgaggcccaccagccgctcatc
cccagtgcctgcctgacacggcagcacagctacagcgaaccgccccacctccaccgcgcc
gccatcgtacgccgcacggcctccctcaagccccaggtgccccccaagcccctcttcctg
cctgccacttcgcccgtaaatgagcaaggcaagtataactactga
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