Salmo trutta (river trout): 115173645
Help
Entry
115173645 CDS
T08542
Name
(RefSeq) myocyte-specific enhancer factor 2D homolog isoform X1
KO
K09262
MADS-box transcription enhancer factor 2D
Organism
stru
Salmo trutta (river trout)
Pathway
stru04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
115173645
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
stru03000
]
115173645
04131 Membrane trafficking [BR:
stru04131
]
115173645
Transcription factors [BR:
stru03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
MADS-box regulators of differentiation, MEF-2
115173645
Membrane trafficking [BR:
stru04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
115173645
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRF-TF
HJURP_C
Motif
Other DBs
NCBI-GeneID:
115173645
NCBI-ProteinID:
XP_029587800
Ensembl:
ENSSTUG00000040153
LinkDB
All DBs
Position
34:13754675..13785690
Genome browser
AA seq
569 aa
AA seq
DB search
MGRKKIQIQRITDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNHSNKLFQYAST
DMDKVLLKYTEYNEPHESRTNADIIETLRKKGFSGCESPEPDGEDSIDQIPLNDDKYRKT
TEDLDILFKRYGVSSSVPPPTFSVPVTVQASNQNALQFSNPGNAMVTTSYVTSSSLSDNH
HLSPQPPALQRNTVSPGLPQRPASAGAMLGGDLNNSNGGCPSPVPNGYISARASPGLLSV
SNGNSLGKVVPAKSPPPPQSPQMVNSRKPDIRVITTQGGKSLMQMTDDELEMVSENAQRL
AGAQVTQMLTTPVVSVTTPSLLAQGMPFSAMPTAYNTEYQLTSADITALHALASPGGLLQ
GNAPWQQSLSQQQHQQQQQLSLASLSNLVMWGMDKQSGDLSSQISSLAANLSASQSNLLL
GRDEWLGRPVGHIPQGAMLTVNTNSNVSIKSEPISPGRDRRSPCPPPSSSGGGNQTTVPP
PQYPGSLLCLEPPTGRSPAHSLSSNGSSYEGNDRDDPGAGGGIGGSAAGNRGRSLPPDFS
PSVELLRAQNEVEQEGANIKRMRLDAWVT
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atggggaggaagaagattcagatccaacggatcaccgatgagaggaacagacaggtgacg
ttcaccaagaggaagtttggcctgatgaagaaggcgtacgagctgagcgtgctgtgcgac
tgtgagatcgccctcatcatcttcaaccactccaacaagctgttccagtacgccagcacc
gacatggacaaggtcctgctcaagtacaccgagtacaacgagccccacgagagccggacc
aacgctgacatcatcgagacgttgcgaaagaaaggcttcagcggttgcgaaagtcccgag
ccggacggagaggactccatagaccagatccccctgaacgacgacaaataccgcaagacc
accgaagacctagacatcctcttcaagcgctacggtgtaagttcttcggtcccgcccccc
acattctctgtgcccgtcaccgtccaggcctctaatcagaacgcattgcagttcagtaac
cctgggaacgccatggtgaccacctcctacgtgacgtcgtcatcgctctctgacaaccac
cacctgtcaccccagccgccggcgctccagagaaacacagtatctcccgggttgccacag
cgaccggccagcgcaggtgctatgctcggaggtgacttgaacaactcaaatggtggatgc
ccaagtccagtcccgaacggctacatcagtgccagggcctccccgggcctcctctctgtc
tccaacggcaacagcctggggaaagtagttccggccaagtccccacctccgcctcagagc
ccacagatggtcaacagccgcaagccagacatccgggtaatcaccactcagggtgggaag
agcctgatgcagatgacagacgatgagctggagatggtgagcgagaatgcccagcgtttg
gccggtgcacaagtgacccagatgctcaccacaccggtggtctctgtgacaacgcccagc
ctcctggcgcaggggatgcccttctccgccatgccgacagcttacaacacagaataccag
ctgacgagcgctgacatcaccgctctgcacgccctggcgtcaccaggcggcctgctgcaa
ggcaacgcgccatggcaacagtctttatcccagcagcaacatcaacaacagcaacaactt
agtctggcgtcgcttagcaacttggtcatgtggggcatggacaaacagagcggggatttg
tctagccagatctccagtctggcagccaatctgagcgcctcgcagtccaacctcctcttg
ggtagagatgagtggttgggccggccggtgggccacatacctcagggcgccatgctgact
gtcaacaccaactccaatgtgagcatcaagtctgaacccatctcgcccggccgagaccgc
cgctcaccgtgccccccgccgtcctcctctggagggggcaaccagacgaccgtgcccccg
ccacagtaccctggttccctactgtgcctggagccaccaaccggccgttcccccgcccac
agcctcagcagcaacggcagctcctacgagggcaatgaccgggatgaccccggggcaggc
ggcggcattggcggaagtgcagcgggcaaccgtggccgttccctgccccctgatttcagc
ccttcggtggagctcctgcgagcccagaatgaggtggagcaggagggggccaacatcaaa
cgcatgagactcgacgcgtgggtcacatag
DBGET
integrated database retrieval system
