Entry |
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Name |
(RefSeq) thrombospondin-3b-like
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KO |
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Organism |
stru Salmo trutta (river trout)
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Pathway |
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Brite |
KEGG Orthology (KO) [BR:stru00001]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
115173685
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
115173685
09144 Cellular community - eukaryotes
04510 Focal adhesion
115173685
09142 Cell motility
04820 Cytoskeleton in muscle cells
115173685
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:stru04131]
115173685
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:stru04147]
115173685
00536 Glycosaminoglycan binding proteins [BR:stru00536]
115173685
Membrane trafficking [BR:stru04131]
Endocytosis
Phagocytosis
Opsonins
115173685
Exosome [BR:stru04147]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
115173685
Exosomal proteins of colorectal cancer cells
115173685
Exosomal proteins of bladder cancer cells
115173685
Glycosaminoglycan binding proteins [BR:stru00536]
Heparan sulfate / Heparin
Extracellular matrix molecules
115173685
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SSDB |
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Motif |
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Other DBs |
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LinkDB |
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Position |
34:15794174..15824999
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AA seq |
955 aa
MDMGRLVQNVLLVSASLLLGISRSSEMQVIDMLELHDAKQSASAVGKMSGALGFVSDLYL
VSNLRLPPKLGGVLLGVYNKDDNRKYLEVALMGKVNKVLVRYVREDGKLHTVNLQNPGLS
DGRTQSLILHVGGLRRNHLHMELYVNCRLADSAQVLPSLVQLPSEAESVEIRNGQKAYAR
LQGSVDSLKLALGGSIAKAGILTDCPFQGDTYFQNSAGADVNAILGDHTKALIGQLIIFN
QILGELREDIREQVKEMSLIRNTILECQACGFHEPHSRCVPNLCYKGTPCTETREYPGYR
CGACPEGMTGNGTHCQDIDECAVARPCFSPEGCVNTAKGFTCEPCPVGFSGSVLSGVGME
FAKSHKQECTDVDECADLSNTCVPNSVCINTEGSFRCGLCKESFVGNQTVGCFLRRSCAT
LGFNPCDVNAHCVIKGAAEVSCECNVGWAGNGYTCGPDTDSDGYPDQPLPCIDNDYHCRA
DNCVNTPNSGQEDADGDGIGDQCDEDADGDGIQNVEDNCRLVPNKDQQNSDTDSYGDACD
NCPNVPNGSQKDTDGNGAGDTCDNDIDGDGIPNVLDNCPKMPNPMQTDRDGDGVGDACDS
CPEVNDPLQSDVDNDLVGDVCDTNQDMDGDGHQDSRDNCPDVPNSSQLDSDNDGIGDECD
DDDDNDGIPDAGPPGPDNCRLIPNPSQTDTDRNGIGDMCENDFDNDSVIDLIDVCPESAE
VTMTDFRAYQTVILDQEGEAQIDPNWIVLNRGMEIVQTMNSDPGLAIGITAFNGVDFEGT
FHINTATDDDYVGFIFGYQDSSSFYVVMWKQMEQTYWQSLPFRAMAQPGLQLKAVKSRTG
PGEYLRNALWHTGDTPGEVTLLWKDPRNVGWRDKTSYRWHLSHRPQVGYIRVRLYEGMTL
VADSGVVVDTSMRGGRLGVFCFSQEQIIWSNLGYRCNDTVPEDYEFYRKQIHIRV |
NT seq |
2868 nt +upstreamnt +downstreamnt
atggatatggggaggcttgtgcaaaatgttctacttgtgagcgcgtcgcttctcttgggc
atcagcaggtcttcagaaatgcaagtgattgacatgctggaactgcacgacgccaagcag
agtgcgtccgcggtggggaagatgtcgggggctctgggcttcgtgtcggacctgtacctg
gtgtccaatctgcgactgccgcccaaactgggaggagtgctgctgggcgtctacaacaaa
gacgacaacaggaagtacctggaggtggccctcatgggcaaggtcaacaaagttctggtg
cgctatgtacgtgaggacggtaaactccacacagtgaacctccagaaccccggcctctcc
gacggacgcacccagtcactcatcctccacgtgggtgggctccgacggaaccacctccac
atggaactctatgttaactgccgattggctgactcagcacaggtcctgccgtcattggtc
cagctcccatcagaggcagagtctgtggagattcgcaatgggcagaaggcctatgccagg
ctacagggctcagtggactctctgaaactggctctgggtggctccatagccaaagcagga
atcttgaccgattgtccatttcagggtgatacatattttcaaaattcagctggtgccgat
gttaatgccattctgggtgaccataccaaggctttgattggccagctgatcatcttcaac
cagatcctgggtgaactccgagaggacatcagggaacaggtgaaggagatgtctctgatt
aggaacaccattctggagtgccaagcgtgtggcttccacgagccccactctcgctgcgtg
cccaacctctgctataagggcactccctgtacagagacccgggagtacccagggtaccgt
tgtggtgcctgcccagaaggcatgacggggaatggcacccactgccaggacattgacgag
tgtgctgtagcccggccctgtttctcgcccgaggggtgtgtaaacacagccaagggcttc
acctgtgaaccctgtcccgtcggcttctcaggatccgtcctcagtggggttgggatggag
tttgccaaaagccacaagcaggagtgcacagatgtggatgagtgtgctgacctctccaac
acctgcgtccccaactctgtctgcatcaacacagagggctcgttcaggtgtggtctgtgt
aaggagagctttgtgggcaaccagacggtgggctgtttcctgcggaggtcctgcgccacg
ctgggcttcaacccctgcgacgtcaacgcccactgtgtcataaagggtgctgccgaggtc
tcctgcgagtgtaatgtgggctgggcaggaaatggatatacgtgtggtccagacacagac
agcgacggctaccccgaccagcctctcccctgcatagacaatgactatcactgtcgagcc
gacaactgtgtgaacacacccaactctggccaggaagacgcagatggagacggtataggt
gaccagtgtgacgaagatgcggacggagacggaatccagaacgtggaggacaactgccgt
ctggtccccaacaaggaccaacagaactcggacacagactcatatggggacgcgtgtgac
aactgccccaatgttcccaacggcagccagaaggacaccgacggaaacggggctggcgac
acctgtgataatgacattgatggggatggtatcccaaacgtgctggacaactgtcccaag
atgcccaaccctatgcagacggaccgtgacggggatggagtgggagacgcatgtgacagc
tgcccagaagtcaacgaccccttgcagtctgacgtggacaatgacctggtgggagatgtg
tgtgacaccaaccaggatatggatggggacggccaccaggactccagggacaactgtcca
gacgtccctaacagctctcagctggactcagacaacgacggcatcggcgacgaatgcgac
gatgacgacgacaatgatggcattccagatgcgggacctcccgggccggataactgccgt
ctcatccccaaccccagccagacagacactgacagaaatggcattggtgacatgtgcgag
aatgactttgacaatgactcagtgatagacttgattgacgtgtgtccagagagcgctgag
gtcacaatgaccgacttcagagcctatcagacggtcatcctggaccaggagggcgaagcc
caaatcgaccccaactggatagtgctcaatcggggtatggaaattgttcaaaccatgaac
agtgaccctggtttggccataggcatcacagcctttaacggggtagactttgaggggacg
ttccacatcaacacggccacggacgatgactatgtgggcttcatctttggctaccaggac
tcgtccagcttctacgtggtcatgtggaaacagatggagcagacctactggcagtcgctg
ccttttagggccatggcccagccaggcctgcaactgaaggcagttaagtcacgtacgggt
cccggtgagtacctccgtaatgccctgtggcacacgggcgacaccccgggtgaggtcacc
ctgctgtggaaggaccccaggaatgtgggctggagggacaagacatcttaccgttggcac
ctcagccaccgcccgcaggtgggctacatcagggtgaggctgtatgaaggcatgacattg
gtggcagactctggcgtggtggtggacacctcaatgaggggcgggaggctgggcgtcttc
tgcttctcccaggagcaaatcatctggtccaacctgggctatcgctgcaacgatactgta
ccagaggactatgaattctaccgcaagcagatccacatcagggtgtga |