Salmo trutta (river trout): 115173692
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Entry
115173692 CDS
T08542
Name
(RefSeq) rho guanine nucleotide exchange factor 2-like isoform X1
KO
K12791
Rho guanine nucleotide exchange factor 2
Organism
stru
Salmo trutta (river trout)
Pathway
stru04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
115173692
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
stru04131
]
115173692
Membrane trafficking [BR:
stru04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
115173692
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_16
RhoGEF
C1_1
C1_2
SOS1_NGEF_PH
PH
Prok-RING_1
Pinin_SDK_N
PHDvar_NSD
PHD
TMF_TATA_bd
Motif
Other DBs
NCBI-GeneID:
115173692
NCBI-ProteinID:
XP_029587858
Ensembl:
ENSSTUG00000046029
LinkDB
All DBs
Position
34:16172646..16247464
Genome browser
AA seq
1096 aa
AA seq
DB search
METISHLQLYVSLENLEMEKVLGAALGVRRVGRNPITQEGSLSSLTEEEAGSDPQHYSVL
EEQSNQLQGCSASAPTLSVVHRSNPPSTAPRPRSNCYETLPYGQLGGSTQSVDRDLGLLL
WGREGSWTEITRDRAQEEVTGGPFVRTFSFLRKMAGNRKNKEKERMREREKEARDREARY
SNGHLFTSLTVSGTTLCSACNKSITAKEALSCPTCSVTIHNRCRDTLPNCAKMKQRQQKM
ALMRNNSALQNVTLRTKTPMMRERPSSAIYHSDNLRQSLLGSRRGRSGLSLSKSVSTNNI
AGNLNDDSPLGLRRILSQSTDSLNFRNRAMSMESLNDEGEVYYASMLEEMEIEGRDFEAD
SWSMAVDSGYLQTHRKDIIKRQDVIYELIQTELHHVRTLRIMERVFRQGMLEEVQLEPGV
VHAIFPCLDRLTGIHVRFLAQLLTRRNHSLQTGSTYNFTIHQLGDVLLEQFSGQCADEMR
KTYAEFCSRHLKAVKLYKELLARDKRFQYFIRRVCRGHLLRRHGVQECILLVTQRITKYP
VLIQRILDNTKDNEEEASCLTQSLTQIRELLSSVDQQVMELERTHRLQEIRARLDPRVEA
KVRDGGLFRGGELLRRRLIHEGTLLWKTPGSRLKDVQVLLMTDILVFLQEKDQRFIFPCL
DKSPVLSLQNLMIREIANQERGLFLISDSSPPEMYEVHAASKDDKNTWIRIIQHTVSSCP
SREEFPLIETEDKALLRRLKADIQQKDREVLELLQERVTLFSDLAEVTGGQEVMLPGGPN
SRNLFRADTPHAPLGERLLTDAIAEVDRLSELLLGSTFEMPLPCSFNGHPNHTGALVING
QEVVVNGTHRSPAAKDRNGNQAGDRPSTEEAYQRLVNLSAYLHALQGTVIKQDSILELCL
RSEGPPVDAPTTPTGRVWRSLSRDAGMAEASTGAAIGELALLQRQHSLLQEELSRLRGTE
GRLRDSEKARAQLERQVRDMKAHSATMMDSVGTAGSEQAPPLRRASETNADTQLASQESI
EHSEGHHDGSDLEVEVTSDEEEEEAKASPRSESPHDLQDIPEESEATAEPPREPDVSHCS
PTLKNRPKRTSELNLK
NT seq
3291 nt
NT seq
+upstream
nt +downstream
nt
atggaaacaatctctcatctgcaactatatgtgagtctggagaacctggagatggagaag
gttctgggagcggcactgggcgtccggcgagtggggaggaaccccatcactcaggagggc
tccttgtcttccctcacggaggaggaggcagggtccgacccgcagcactactccgtattg
gaggaacagtccaaccagctgcagggctgcagtgcgtcggccccaaccctcagtgtggtg
catcgcagcaaccctcccagcacggccccccgaccacgctccaactgctacgagacttta
ccctacggtcaacttggaggatccacgcagagtgtggatagggacctgggtcttctgctc
tgggggagagagggaagctggacggagatcacgagagaccgggcccaggaggaggtgaca
ggcggcccttttgtgcgcaccttcagtttcctacgcaagatggccggcaaccgcaagaat
aaggagaaggagcgcatgagggagagggagaaggaggcgcgggacagggaggcgcgctac
agcaacgggcatctcttcacctccctcaccgtgtcggggaccaccctttgttcagcatgc
aacaagagcatcactgccaaggaggccctcagctgccccacctgcagtgtaaccatccac
aaccgctgtcgagacacgttgccaaactgtgccaaaatgaaacagaggcaacagaagatg
gctctcatgaggaacaactcagctctgcagaacgtgacccttcgtaccaaaacccccatg
atgagggaacgccccagctccgccatctaccactctgacaatctccgccaatccctgctg
ggctcgcgccgtggacgctccggcctttctctctccaagagcgtctccaccaataacatt
gcagggaacctgaatgatgactctcccttggggctgcgcaggatcctgtcccagtccaca
gactcgctcaacttcaggaacagagctatgtccatggagtcgctcaacgacgagggagaa
gtgtactacgcctccatgctggaggaaatggagattgaggggcgggattttgaggcggac
tcatggagcatggcagtggactcgggctacctgcagacgcatcgcaaagacatcatcaag
aggcaggacgtcatctatgagctgatccagacagagctgcaccacgtgcggacgcttcgc
attatggagcgagtgttccgccagggcatgctggaggaggtgcagctggagccgggcgtg
gtgcacgccatcttcccctgcctggaccgcctcactggcatccatgtccgcttcctggca
cagctgctcacacggcgcaaccacagcctgcagactggcagcacctacaacttcactatc
caccagctgggagatgtgctgctggaacagttctcgggccagtgtgctgacgagatgaga
aagacctacgctgagttctgcagccgccacctgaaggctgtcaagctgtacaaggagttg
ctggctagagacaagaggttccagtacttcatacggcgggtgtgtcggggtcacctgttg
cgtcgccatggcgtccaggagtgcatcctgttggtcactcaacgcatcaccaagtaccct
gtcctcatccagcgtatccttgacaacaccaaggacaatgaagaggaggcctcctgtctg
acccagtctctgacccagatcagggagctactcagctcagtggaccagcaggtgatggag
ctggagcggactcatcggctgcaggagatccgggccaggctggacccacgggtcgaggcc
aaggtgagggacgggggcctgttcaggggaggggagttgctccgcaggagactcatccat
gagggaacgctgctctggaagacccctggatccaggctgaaagatgtgcaggtcctgctg
atgacagacatcctagtgttcctacaggaaaaagaccagaggttcatcttcccttgtcta
gacaagtctccggtcctctccctgcagaacctcatgattagggagatagccaatcaggag
cgagggctcttcctcatcagtgactcctcccctccggagatgtacgaggtccatgctgcc
tcaaaagatgacaagaacacctggatacgcatcatacagcacactgtcagcagttgtcct
tccagggaagagttcccactcatagagactgaagacaaggcccttctgagacgactgaaa
gcggacatccagcagaaggaccgggaggtgctggagctgctccaggagcgggtcaccttg
ttctcggacctggctgaggtgacggggggtcaggaggtcatgctcccggggggccccaac
tcccggaacctgttccgggccgacacgccccatgcgccactcggcgagagattgctcact
gatgccatcgcagaggtggataggctgagtgagctactactgggctccacctttgaaatg
cctctgccctgcagtttcaacggtcacccgaaccacacaggggcgctagtgatcaatggt
caggaggtggttgtcaatggaacgcacaggtccccagcagcaaaggaccggaatgggaat
caggctggagataggccctcaactgaggaagcgtatcagaggttggtcaaccttagtgcc
taccttcatgccctccagggcaccgtaatcaagcaggactccatcctggagctctgcctg
cgctctgaaggcccaccagtcgatgccccgaccacacccaccggacgggtctggcgctcc
ctgtcacgtgacgcgggcatggctgaggccagcacgggggcggccatcggagagctggcc
ctgctccagaggcagcacagcctcctgcaggaggagctcagtaggctgcggggtaccgag
ggccgtctgagggatagcgaaaaggcccgcgcccagctggagaggcaggtccgcgacatg
aaggcccacagtgccaccatgatggacagtgtgggaactgcaggctcagagcaggctcca
ccccttcgcagagcaagtgaaaccaacgcagacacccaattggccagccaggagtcaatc
gagcattcggaagggcatcatgatggcagtgacttggaggtggaggtgacgtcagatgag
gaggaggaggaggccaaagcatcaccgcgctcggagagtccccatgatcttcaggacatt
ccagaggagagtgaagccacagcagaaccaccacgagagcctgacgtgtcacactgctcc
cctactctcaaaaataggccgaagagaacatcagaactgaacttgaaatag
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