Salmo trutta (river trout): 115173696
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Entry
115173696 CDS
T08542
Name
(RefSeq) tropomyosin alpha-3 chain isoform X1
KO
K10373
tropomyosin 1
Organism
stru
Salmo trutta (river trout)
Pathway
stru04260
Cardiac muscle contraction
stru04261
Adrenergic signaling in cardiomyocytes
stru04814
Motor proteins
stru04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
115173696
04820 Cytoskeleton in muscle cells
115173696
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
115173696
04261 Adrenergic signaling in cardiomyocytes
115173696
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
stru04812
]
115173696
04147 Exosome [BR:
stru04147
]
115173696
Cytoskeleton proteins [BR:
stru04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Tropomyosins
115173696
Exosome [BR:
stru04147
]
Exosomal proteins
Exosomal proteins of microglial cells
115173696
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tropomyosin
CLZ
Laminin_II
TMF_DNA_bd
DUF3450
DASH_Duo1
PUMA_CC
ATG16
Motif
Other DBs
NCBI-GeneID:
115173696
NCBI-ProteinID:
XP_029587871
Ensembl:
ENSSTUG00000047447
LinkDB
All DBs
Position
34:16254219..16293187
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AA seq
284 aa
AA seq
DB search
MEAVKKKMLMLKLDKENALDAAEQADTDKKAAEERSKQHEDELLQMQKKLKGTEDELDKY
SEALKDAQEKLEVADKKAADAEAEVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAA
DESERGMKVIENRALKDEEKMELQEIQLKEAKHIAEEADRKYEEVARKLLIIEGDHERTE
ERAELAEAKARALEEELRGFDQSLKSLQASEDQYSQKEDKYEEEIKILTDKLKEAETRAE
FAERSVAKLEKTIDDLEERLANAKEENLKIHATLDQTLQDLNSF
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atggaggcagtcaagaagaagatgcttatgttgaagctggataaggagaacgctctggac
gcggcagaacaggccgataccgacaagaaggcagccgaggagagaagcaagcagcatgag
gatgagttgctgcagatgcagaagaagctgaaggggactgaggatgagctggacaaatac
tctgaggccttgaaggatgcccaggagaagttggaggttgcggacaagaaggccgcagat
gctgaggctgaggttgcttccctgaaccggcgtatccagctggttgaggaggagttggac
agggcccaggagcgactggccactgctctgcagaaactggaggaggcagagaaggctgcg
gacgaaagtgagaggggcatgaaggtgattgagaaccgggccctgaaggatgaggagaag
atggagctacaggagatccagctgaaagaggccaagcacattgctgaggaggctgaccgc
aagtacgaggaggtggctcgtaagctgctgatcatcgagggggatcacgagcgcacagag
gagagggcagagcttgctgaggccaaagccagggccctggaggaggagctgaggggtttc
gaccaatctctgaagtccctgcaggcctctgaagaccagtactcccagaaggaggacaag
tatgaggaagagattaagatcctgactgacaagctcaaagaggctgagactcgtgctgag
tttgctgagaggtctgtggccaagctggaaaagaccatcgatgatctggaagagagactg
gccaatgccaaggaggagaacctcaagatccatgccaccctggaccagactttgcaggac
ctcaacagcttctaa
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