Salmo trutta (river trout): 115173747
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Entry
115173747 CDS
T08542
Name
(RefSeq) AT-rich interactive domain-containing protein 1A-like isoform X1
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
stru
Salmo trutta (river trout)
Pathway
stru03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
115173747
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
stru03000
]
115173747
03021 Transcription machinery [BR:
stru03021
]
115173747
03036 Chromosome and associated proteins [BR:
stru03036
]
115173747
Transcription factors [BR:
stru03000
]
Eukaryotic type
Helix-turn-helix
ARID
115173747
Transcription machinery [BR:
stru03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
115173747
Chromosome and associated proteins [BR:
stru03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
115173747
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAF250_C
ARID
Hid1
Motif
Other DBs
NCBI-GeneID:
115173747
NCBI-ProteinID:
XP_029587970
Ensembl:
ENSSTUG00000038000
LinkDB
All DBs
Position
34:18905492..19066384
Genome browser
AA seq
2301 aa
AA seq
DB search
MAAQVASVATLNTSPPSELKKPDRDPLEESVPGEKQHENKEPGSDNGSPGQKDLQDGADA
GNVGGGGEPDMKNGNSSRVNNNNNQNDTAGPEGNNQPGMGHHHQGSFPPPPYGYNQHYSR
GPFHQHGGQQSPGMAAAAGPAVQSGNMMDPYPPNSHEHGFPNHFNNYSPFPNRTSYQGQG
YAMNSPRNNQPPAAGGQPVKQQPAGGTTAMAASYNNQRYNVGNTQPTSTPTLNQLLTSPS
STRTYQNYPQGDYSNQEGASKGAADMASSQYGGGHPGWQQRSHQPPPMSPGNTGQPLNRN
QPPSPMDHVGKMRGQGYCGANPYSQQQQQGQGQGAPPPGAQQGASYPGQGYGPPGPQRYP
VGMQGRTPTGMAGMQYGQQMAGFGQQGPGGYGQQSQGYYSQHGPPPHAGQQQAPYPQQPQ
TTPGTQAPYPQQVHPSQGQGPPQGGPSQAQPPYNQGPPQPQQQPGPQQGQPGPQGQGPQP
SYPQQQGPPGPGQGQQPPSQQQPPSQQQGPPQQQGPPQQQGPPQQQQDRAAPPQAQPPPG
HQQPPVHQPPPSHQSSPGHHPSPGHGGPPQQQGQSQQGQPSPYSQTPPLQQSPFQRFPPP
PQELSQDSFSSQSSAPPSNQPMTSSKSGAEDSMQGRPSSLPDLSGSIDDLPTGTEGALSP
GVSTSGVSSSQGEQSNPAQSPFSPHTSPHLPGIRGPSPSPVGSPASVTPSRSGPLSPAAV
PGNQMPPRPPSVHSDGILHTSMGQSAMGQDRVYMRNPQMPPYGSPQQPGSALSPRQSSGG
QMHPGMGPYPQNNSMGNYGPQGGQYGPQGYPRQPGYSGMPNANYPGGPGGMNPMPGQAGG
APYAGMPPGRMGPGQMGARPYGPGMGPNMGPGMPPQVTSGMCPPPGMNRKGPGGPPDAAS
AMHHGANSIHNRPPGYPPNMPHGAGSPYGPGPGAINSMQGMMNQGGPYGGGPMGGNMANN
TPGMAPSPEFGIDVKLNPAQKMNNKVDGTPKPETKKVKKKSNSSTTTNEKITRLYELGPE
LERRTWVDRYLAFAEEKAMGMTNLPAVGRKPLDLFRLYVSVKEIGGLTQVNKNKKWRELS
TNLNVGTSSSAASSLKKQYIQCLYAFECKIERGEDPPPDLFTDAKKTTQTKIQPPSPAGS
GSLQGPQTPQSTSSSMAEGGDQKPPTPASTPHSQMPPMPVRLQDPFADGVDPAFARRNSM
TPNSYQPGMGGPEMVGNMGPYESNKDPFGGMRKAGEQFMTPGPGPNSGMEGQFNRGPPGP
MGPNMQMGLRQQYPYGPGYDRRQEPGMGPDVSMGPGAPQPNLMPSGADSGMYSPSRPPPQ
QRHDSYGNQYPGQGAPPGGPYPNQQPGMFPQQQPNYKRPPVDGGYGPPVKRHEGDGMYNV
PFSGQQQPGPQPSGGPQGQQDMYNQYNAGYPGSDRRPPGPQGQFPFPFGRDRGPSSGGPN
SQSPMPPQMMGSPMQAAPDGPQGPMWQGRNEMGYPNYPNRQGPPGPGQGPPQGYHGMNRS
EEMMPGADQRMNHEGQWPGHPSQRQSPYGPGGSGPPMSRPLQSSYQSSQNHISQVSSPAP
MPRPMESRTSPSKSPYMHSGIKMQKAGPPVPASHIGQAPVQPPLIRRDIAFPPGSVEASQ
PILKPRGRLTMKDIGTPEAWRVMMSLKSGLLAESTWALDTINILLYDDNSISTFNLCQLP
GFLELVVEYFRRCLIQIFGILKEYEVGDPGQRTLIDPHAADEDWSDEELPEQEDMEEEED
EEEEDERKSNADTTTSSQQVQVKKEEEEEKSTTEKSTAEEEKEREGGESSSTSSAPQNLS
LLQEKPKQASKFDKLPIKMVRKKDPFPGGRSSKLGRRQSFDSGLIHWSIGGGDTTEHIQT
HFESRFDLLKQRKRVLPSATESRKKVTVPATVSEDPENTTKPGKEEQTTKTSTPTTPATV
TATIDDVLSARPGSVTEEAVRGAAEEQKENGGKFLFSIRQAQQSRRNLTILEDEPHSKDE
TPLSTLSDWQDTLARRCVCVSNIVRSLSFIPGNDLEMSKHPGLLLLLGRLVLLHHRHPER
KQAPVTYEKEEEEDERVSCERDEWWWDCLEVLRENCLVTLANISGQLDLSIYPESICLPL
LDGLLHWAVCPSAEALDPFPMLGPHGALSPQRLVLETLSKLSIQDNNVDLILATPPFSRL
EKLYGTLVRLVGERKVAVCREMSVVLLANLAQGDSMAARAIAVQKASVGNLLGFLEDSLA
ATQYQQSQSSMMHLQGAHFEPTSVDMMRRAARALHAMAKVEENHSEFTLYESRLLDISVS
PLMNSLVSHVICDVLFLIGQS
NT seq
6906 nt
NT seq
+upstream
nt +downstream
nt
atggccgcgcaggtcgccagcgttgccactctcaacactagcccgccatccgaacttaaa
aagccggatcgggacccactggaggagtcggtaccgggagagaaacaacatgaaaataag
gaacctggatctgacaacggatctccgggccagaaggatctgcaggacggggccgatgct
ggaaatgtagggggaggaggggagcctgacatgaagaacgggaactcgtccagggtgaat
aataataacaaccaaaatgatacggcgggaccggaggggaataaccagcccgggatgggc
catcaccaccagggctcattccctccacctccatacgggtacaaccagcactacagccgg
ggcccttttcatcaacatggcggacaacaaagccctggcatggcagctgcagcgggaccg
gcagtgcagtcaggcaacatgatggacccatacccgcccaactcacacgagcacggcttc
cccaaccatttcaacaactacagccccttcccgaaccggacttcttatcagggccaagga
tacgccatgaattccccgcgtaataaccagcccccggcggctggggggcagccagtcaag
caacagccagcaggcggaactacagccatggctgcctcctacaataaccagaggtataac
gtaggaaacacacagcccacgtctaccccgacattaaaccagctcctaacgtctcccagc
tccacgaggacctaccagaattacccacaaggggactatagtaaccaggaaggggctagc
aagggagcagcagatatggccagcagtcagtatggcgggggtcatccgggttggcaacaa
aggagccaccagccgcctcctatgagcccagggaacacgggacaacctctgaacagaaac
cagccacccagccctatggaccatgtagggaagatgcggggccaggggtattgtggagcc
aacccctactcccagcagcaacagcaaggccagggacagggcgctcctcctccaggggcc
caacagggtgcctcctacccaggccagggctatggacccccagggcctcaaaggtatcct
gtgggcatgcagggacgcacccccaccggcatggctggcatgcagtacggacaacagatg
gccggctttgggcagcagggtccagggggctacggtcagcagagccagggctactacagc
cagcacggccccccaccacacgctggccagcagcaggccccctatccccagcagccccag
actacccctggaacccaggccccctacccccagcaggtccacccctcccagggccaaggg
cctccacaagggggtccatcccaggcccagccaccctacaaccagggaccaccccagccc
cagcagcagccggggccccagcagggccagcccggtccccagggtcagggcccccagccc
agctaccctcagcagcaaggacccccaggcccagggcaggggcagcaacccccctcgcag
cagcaacccccctcgcagcagcaaggacccccgcagcagcaaggacccccgcagcagcaa
ggacccccgcagcagcaacaagatagggcggcccctccacaggcccagccacccccaggc
catcaacaacccccagtccaccagccaccccccagccaccaatcctccccgggccaccac
ccatctccaggccacggtggacccccacagcagcagggtcagtctcagcagggccagccc
tcaccctactcccagaccccacccctgcagcagtcgcccttccagcggtttccacctccg
ccacaggagctctcccaggactcgttcagctcccagtccagcgctcccccctccaaccag
cctatgacttccagcaagagtggcgcagaggacagcatgcagggacggccttctagttta
ccagacctctctggttccatagatgacctgccgacgggtacggagggggctctgagtccg
ggggtcagcacgtcgggggtgtccagtagccagggggaacagagtaatcccgcccagtca
cccttctcccctcacacttcgccccacttgcctggcatccgcgggccgtccccctccccc
gtgggctcccctgccagcgtcaccccctcgcgctccgggcccctctcacctgctgctgtg
ccaggtaaccagatgcctccccggccgcccagcgtccattcagacggcattctccacaca
tccatgggccagtcagccatgggccaggacagggtgtacatgcgtaacccccagatgcct
ccctacgggtcgccgcagcaacctggctccgccttatcccctcgccagtcatcgggaggc
cagatgcatcctgggatggggccctaccctcagaacaactccatggggaactacggccct
cagggtggacagtacggaccacaaggttaccccagacagcctggctacagtggcatgccc
aacgccaactaccctggtggtcctgggggcatgaaccctatgccaggccaggctggtggg
gcgccgtatgcaggcatgccccctggcaggatgggtccgggtcagatgggtgcccgcccc
tacggccccgggatgggccccaacatgggccccggcatgcctccacaggtgacctctggg
atgtgcccccctccaggcatgaacaggaagggccccggtggccctccggatgcagcctct
gccatgcaccacggagccaactctatacacaacaggcctccaggttacccccccaatatg
ccccatggagcagggtctccgtatggccctgggccgggggccatcaacagcatgcaaggt
atgatgaaccagggaggaccctacggaggagggccaatgggaggaaacatggccaacaac
acacctggcatggctcctagccctgagtttggcatcgatgtcaaactgaacccagcccag
aagatgaacaacaaggtggacggcacgcccaaacctgaaaccaagaaggtaaagaagaag
tccaactcttccacgacaaccaatgagaagataactcgtctgtatgagctgggtccggag
ctggagaggaggacgtgggtagaccggtacctggcgttcgctgaggagaaggccatgggc
atgaccaaccttcccgccgtgggacgcaaacctctggacctcttcagactttacgtctcg
gtcaaagagatcggaggcctcacacaggtgaacaagaataagaagtggagggagctgtcc
accaacctgaacgtgggcacgtccagcagcgccgccagctctctgaagaagcagtacatc
cagtgtctgtacgccttcgagtgcaagatcgaacgtggcgaggacccgcccccggatctc
ttcactgacgccaaaaagaccacccagaccaagatccagccccccagcccagctgggtct
ggatctctgcagggcccccagaccccccagtccaccagcagttccatggcggagggagga
gaccagaagccccccaccccagcctccacccctcacagccagatgcccccgatgcccgtc
aggctgcaggacccgtttgcagacggggttgacccggcatttgccagacggaactctatg
acccccaacagctaccagcctgggatgggcggtccggagatggtgggcaacatggggccc
tacgaatccaacaaggacccctttggtggcatgaggaaagctggagagcaattcatgact
ccagggccgggccctaacagtggtatggaggggcagttcaacagaggccccccagggccc
atgggccccaacatgcagatgggtctgagacaacagtacccctacggacctggatatgac
aggagacaggagccagggatgggtcctgacgtcagtatgggtcctggggccccccagccc
aacctgatgccttcaggggccgactcagggatgtactcccctagccgacccccaccgcag
caacggcatgattcctatggtaatcagtatcctggtcaaggagcgccacctggtggcccc
taccccaatcagcagccaggaatgtttccacagcaacaacctaactacaagcgtcctcca
gtggacgggggctacggtcccccagtgaagcgtcatgagggggatgggatgtacaatgtc
cccttcagcggtcagcagcagccagggccccagccctccgggggcccccagggccaacaa
gacatgtacaatcagtacaacgcaggctaccccggctctgaccgccgaccacctggcccc
cagggccagttccctttccccttcggccgagaccggggaccctccagcgggggccccaac
tcccagtcccccatgcctccccagatgatgggcagccctatgcaggcagcccctgacggc
ccccagggccccatgtggcagggacgcaatgaaatgggttaccccaactaccccaaccgc
caggggcctccaggacctggccagggcccccctcagggctaccacggcatgaaccgctct
gaggagatgatgccaggggctgaccagcggatgaaccatgagggccagtggcctggacac
cccagccagagacagtccccctacgggccggggggctcgggtccccccatgtccagaccc
ctgcagtccagctatcagagctcccagaaccatatttctcaggtgtccagccctgccccc
atgccccgccccatggaaagccggacgtccccctccaagtctccatacatgcactcaggc
atcaagatgcagaaggcggggccccccgtgcccgcgtctcacataggccaggcccctgtg
cagccccccctcatcaggcgggacatagccttccccccagggtcggtggaggcctcccaa
cccatcctcaaaccccgaggacgactcaccatgaaagacatcggcacgccagaggcctgg
agagtgatgatgtcactgaagtcaggcttactagcagagagcacgtgggccttggacacc
attaatattctactctacgatgacaacagcatttctactttcaacctctgccagctgcct
gggttcctggagctggtagtggagtatttcagacgctgcctcatccagatctttggcatc
ctgaaggagtatgaggtgggagaccctggccagcggacgctcatcgacccgcatgctgcc
gacgaagactggtctgatgaagagctgcccgagcaggaggacatggaggaggaagaggac
gaagaagaggaagacgagaggaagagcaacgcagacaccaccacctcgtcgcagcaggtc
caggtgaaaaaggaggaggaagaggagaaatccacgactgagaagtcgacagcggaggag
gagaaggagagggaaggaggagagtcttcttccacctcctcggccccccagaacctcagc
ctcctacaggagaaacccaaacaggccagtaagttcgacaagctgcccatcaagatggtg
cgtaagaaagatcccttccctgggggccgttccagtaagctaggccggcggcagagcttt
gacagcggactaatccactggagcatcggcgggggggacaccacggaacacatccagact
cacttcgagagccggttcgacctcctcaagcagcggaaacgggtgctgccatcagccacc
gagagtagaaagaaggtcaccgtgccggcgacggtgtcggaggacccagagaacactact
aagcctggcaaggaggagcagaccaccaagacctccaccccaaccacgcccgccacggtc
actgccaccatcgacgacgtcctgtcggcccggccgggctcggtgacggaggaggcggtg
cgaggagcagccgaggagcagaaggagaacggggggaagttcctgttctccatccgccaa
gcgcagcagagccgccgcaacctcaccatcctggaggacgagcctcacagcaaggacgag
accccactgagcacgctgtcggactggcaggacaccctggcccgccgctgtgtctgcgtc
tccaacatcgtccgctcgctgtccttcatccccggcaacgacctggagatgtccaaacac
ccggggctgctgctgctgctgggacgtctggttctgctccaccaccgtcacccagagagg
aaacaggcccccgtcacctacgagaaggaggaagaggaggatgagagggtgagctgtgag
agggacgagtggtggtgggactgtctggaggtcctcagggagaactgcctggtcactctg
gctaacatctccggccagttggacttgtccatctacccagagagcatctgtctgcccctg
ctggacggcctgcttcattgggctgtttgtccttcggccgaggccctggaccctttcccc
atgctggggccccatggggccctatccccccagagactggtactggagaccctcagcaaa
ctgagcatccaggacaacaacgtggaccttatcctggccacgccgccgttcagccggctg
gagaagctgtacgggacactggtgcgtctggtcggggagaggaaggtggctgtctgcaga
gagatgtctgtggtcttactagccaacctggcccagggagacagcatggcagccagggct
atcgccgtgcagaaggccagcgtaggtaacctcctgggcttcctggaggacagtctagca
gccacacagtaccagcagagccagagttccatgatgcacctacagggggcgcactttgag
cccactagcgtggacatgatgcggcgagcggcccgcgccctgcacgccatggctaaggtg
gaggagaaccactcagagttcaccctgtacgagtcccgcctactggacatctctgtctca
ccactcatgaactctctggtgtcccatgtgatctgtgacgtactctttctgattggccag
tcatga
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integrated database retrieval system
