Salmo trutta (river trout): 115173782
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Entry
115173782 CDS
T08542
Name
(RefSeq) thyroid hormone receptor beta isoform X1
KO
K08362
thyroid hormone receptor beta
Organism
stru
Salmo trutta (river trout)
Pathway
stru04080
Neuroactive ligand-receptor interaction
stru04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
115173782
04081 Hormone signaling
115173782
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
stru03000
]
115173782
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
stru03310
]
115173782
Transcription factors [BR:
stru03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
115173782
Nuclear receptors [BR:
stru03310
]
1. Thyroid hormone like
1A. Thyroid hormone receptor (THR)
115173782
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
CpXC
Motif
Other DBs
NCBI-GeneID:
115173782
NCBI-ProteinID:
XP_029588024
Ensembl:
ENSSTUG00000040805
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All DBs
Position
34:complement(20940919..21074351)
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AA seq
511 aa
AA seq
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MNYCMPDMYEMPHGVGGGYPMQGGGEYCMYGGDGPGGYGHCEPQPMHQIHPPCMEQAWPP
SQPYACSYPGPNPVFKSEYCTMEVPLSHYNHQPDYYSEGKPDFSHMQWMQEVNKKGYIPS
YLDKDELCVVCGDKATGYHYRCITCEGCKGFFRRTIQKNLNPTYACKYEAKCVIDKVTRN
QCQECRFKKCIAVGMATDLVLDDSKRLAKRKLIEENRERRRKDELQKTVWDRPEPSQEEW
DLIRMVTEAHMSTNAQGNHWKQKRKFLVEEAMLLNEITCNLFYTSDQSAVGVKETKPEDI
GQAPVINAPEGSKVDIEAFSQFTKIITPAITRVVDFAKKLPMFCELPCEDQIILLKGCCM
EIMSLRAAVRYDPESETLTLNGEMAVTRGQLKNGGLGVVSDAIFDLGVSLSSFHLDDSEV
ALLQTVILLSSDRPGLTSVDRIERCQEEFLLAFEHYINYRKHKVAQFWPKLLMKVTDLRM
IGACHASRFLHMKVECPNELFPPLFLEVFED
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atgaactactgcatgcctgacatgtatgagatgcctcatggcgtgggcggtggctacccg
atgcagggcggtggggagtactgcatgtatggaggtgatggtcccggggggtacgggcac
tgtgagccccagcccatgcaccagatccaccctccctgcatggagcaggcttggcccccc
agccagccctacgcctgctcctacccaggacccaaccccgtgttcaaaagtgaatactgc
accatggaagtgcctctcagccactacaaccaccagcccgactactattctgaggggaag
cctgacttctcccacatgcagtggatgcaagaggtcaacaagaaagggtacatccccagt
tacctggacaaggacgagttatgtgtggtatgtggggataaagctacaggatatcactat
cgctgtatcacctgtgaaggatgcaagggtttcttccggcggacgatccagaagaacctg
aacccgacgtacgcttgtaagtacgaggcaaagtgcgtcatcgataaggtgaccaggaac
cagtgccaggaatgtcgcttcaagaagtgcatcgctgtcggcatggcaacagacttggtg
ctggacgacagcaagcggctcgccaagcggaagttgatcgaggagaaccgtgagcggcgg
cggaaggatgagctccagaagacggtgtgggaccggcctgagccgtcccaggaggagtgg
gacctgatccgcatggtcaccgaggcccacatgtcaactaacgcccagggcaaccactgg
aaacagaaacgcaagttcttggtcgaggaagcaatgctacttaatgaaataacatgtaat
ttattctatacttctgaccagagtgcagtgggggtgaaggaaaccaagcctgaggacatt
ggtcaagcgccggtcataaatgcacctgaagggagcaaagtggacattgaagccttcagt
cagtttacaaaaattatcacccccgccattacccgagtggtggactttgccaaaaagctg
cctatgttctgtgagctgccttgtgaagaccagattatcctattgaaaggctgctgcatg
gagatcatgtctttacgggcggccgttcgctacgacccagagagcgagacgctgacactt
aacggagagatggccgtgacccgcggccagctgaagaacggaggcctgggtgtggtgtcg
gacgccatctttgatttgggcgtgtcgctgtcgtcgttccacctggacgactctgaggtc
gctctgctacagaccgtcatcctcctgtcctccgaccgtccggggctgaccagtgtggac
cgtattgagcgctgtcaggaggagttccttctggcctttgaacattacatcaactaccgc
aaacacaaggtggcgcaattctggcccaagctgctgatgaaggtgacggacctgcggatg
atcggggcgtgccacgcctcccgcttcctgcatatgaaggtggagtgccccaacgaactc
ttccccccactcttcctggaggtctttgaggattga
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