Salmo trutta (river trout): 115173783
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Entry
115173783 CDS
T08542
Name
(RefSeq) DNA topoisomerase 2-beta-like isoform X1
KO
K03164
DNA topoisomerase II [EC:
5.6.2.2
]
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
stru03032
]
115173783
03036 Chromosome and associated proteins [BR:
stru03036
]
115173783
Enzymes [BR:
stru01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
115173783
DNA replication proteins [BR:
stru03032
]
Eukaryotic type
DNA Topoisomerases
115173783
Chromosome and associated proteins [BR:
stru03036
]
Eukaryotic type
Chromosome condensation proteins
Other regulators of chromosome condensation
115173783
Centrosome formation proteins
Centriole proteins
115173783
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
TOPRIM_C
DNA_gyraseB
DTHCT
HATPase_c
Toprim
Microp_apicomplexa_20
Motif
Other DBs
NCBI-GeneID:
115173783
NCBI-ProteinID:
XP_029588036
Ensembl:
ENSSTUG00000041492
LinkDB
All DBs
Position
34:complement(21302538..21332709)
Genome browser
AA seq
1670 aa
AA seq
DB search
MSNGAAGSGGLTWVTLFDKKNAAKKREEEAAAAAAAAAANGRGDGGKAEGGGGGAKKKGG
DKMSVERVYQKKTQLEHILLRPDTYIGSVEPVTQQMWVFDEDLGMNLREITYVPGLYKIF
DEILVNAADNKQRDKNMSTIKISIDPESNTITIWNNGKGIPVVEHKDEKMYVPALIFGHL
LTSSNYDDEQKKVTGGRNGYGAKLCNIFSTKFTVETACKEYKHSFKQTWQNNMGKTSDPK
IKFFDGDDFTCVTFQPDLSKFKMEKLDKDIVALLTKRAYDIAGSCKGVKVMLNGKKLPVT
GFRSYVDLYVKDKLDEVGVALKVVNESVNERWEVCLTMSEKGFQQISFVNSIATTKGGRH
IDYVVDQIVAKLIEVVKKKNKAGVSVKPFQVKNHIWVFVNALIENPTFDSQTKENMTLQT
KSFGSKCPLSEKFIRAATNCGIVESILNWVKFKAQTQLNKKCSSVKYSKIKGIPKLDDAN
DAGGKHSSECTLILTEGDSAKSLAVSGLGVIGRDRYGVFPLRGKILNVREATHKQIMENA
EINNIIKIVGLQYKKSYEDPESLRSLRYGKIMIMTDQDQDGSHIKGLLINFFHHNWPSLL
KHTFLEEFITPIVKVNKNKQEHAFYSIPEFDEWKKQTVNFKTWHIKYYKGLGTSTSKEAK
EYFADMEKHRIMFRYAGTEDDAAITLAFSKKKTDDRKEWLTNFMEDRRQRRMHGLPEQYL
YGTQAKHLSYNDFINKELILFSNSDNERSIPSLVDGLKPGQRKVLFTCMKRNDKREVKVA
QLAGSVAEMSAYHHGEQSLLMTIVNLAQNFVGSNNVNILQPLGQFGTRINGGKDAASPRY
IFTMLSPLAKMLFPAVDSSLLKFLFDDNQKVEPEWYIPILPLVLVNGAEGIGTGWACKIP
NYDHREIVNNLYRMLNMQDPLPMLPSYKNFKGVIHELGQNQYMVSGEISVLDKNTIEITE
LPVRTWTQAYKESVLEPMLQGTEKTPALINDYKEYHTDQTVKFVVRMSEEKLAQAEAAGL
HKVFKLQSSLTCNSMVLFDHMGCLKRYDSVQDILKEFFELRLNYYKLRKDWLVGSLGAEA
SKLSNQARFVLEKIEGKITIENKSKRELIRMLVQKGFESDPVAAWTKAQEKALEEDDRDG
NNSDSSVDSGSSSGPNFNYILNMPLWCLSKEKVDELLRQRDIKKGELNELQRKSPEDLWK
EDLAVFIEELDKIEAQEQADICAGKGTKLVKGKVGKPKVKKLHLEETLPSPFGRRVVPTI
TQAMKTDASKKMTKKKKGDADLVMKLEFDDEMGVLGSDGGTGENSLNSSSNTPAPTPAKP
KAPRVKREKKEPGTPRARKPPTPKGSSGRKVKKRNPWSEDESKSESDLEDSEPVVIPRDT
KSQRASAAKPKYTFDFSEEEDGGEEEEEEDDEDAASSPVRPCKDDFTASSETKDRYNDHS
DEDDEDIFPPPKQATTTVSPAKKKEPESIFSSSKSASEKSNDSDDLKLDSDEEDKAFSSF
PSSSAFDKPVPAKKGQEAARSQQDAQYSAEKLSDAAPKPRKAPAPKTPPKQKLDTSVWDS
DSDTGSKKPSTALKGKSGGRKRKQSGSEEDDFSPKKTPGKSPKTPASRKPSKKAAVTPPP
MSDHDDDVDSNRFSQSSVASRERPGRGRAKKEVKYFAESGSDDDQYDMFD
NT seq
5013 nt
NT seq
+upstream
nt +downstream
nt
atgtccaacggcgcagcaggaagcgggggtctgacttgggtgaccctctttgataagaag
aatgctgccaaaaagagggaggaggaggcagcagcagccgcggcggcggcggctgcgaac
ggcaggggtgatgggggcaaggcggagggaggaggtggaggagccaagaagaagggagga
gataagatgtcagtggagagggtttaccagaagaagacccagctggagcacatcctactg
aggcctgacacctacatcggctctgtggaaccggtcacccagcaaatgtgggttttcgat
gaagaccttgggatgaatctacgagaaatcacttatgtccctggattatacaaaatcttt
gatgaaattcttgtcaacgcagccgacaacaaacagcgggataagaacatgtcgaccata
aagatctccattgatcctgagtccaacaccatcaccatctggaacaatggtaaaggcatc
cccgtggtggaacacaaagatgagaagatgtacgttcccgctctcatcttcggacacctc
ctcacctccagtaactacgacgacgagcagaagaaagtcacaggtggaaggaacgggtac
ggtgctaaactctgcaacatcttcagcacaaagttcacagtggaaaccgcctgcaaggag
tacaaacacagcttcaaacagacttggcagaacaacatggggaagacgagcgaccccaag
atcaagttctttgacggggacgacttcacgtgcgtgaccttccagccggacctgtccaag
ttcaagatggagaagctggacaaggacatcgtggctctgctcaccaagagggcctatgac
atcgctgggtcctgcaagggcgtcaaagtcatgctcaacgggaagaaactccctgtgaca
gggttccgcagctatgtggacctgtacgtgaaggacaagctggacgaggtgggcgtggcc
ctgaaggtggtcaacgagtcggtcaacgagcgctgggaggtctgtctcaccatgagtgag
aagggattccaacagatcagcttcgtcaacagtatcgccaccaccaagggtggcagacac
attgattacgtggtggaccagatcgtagccaagctgatagaagtggtgaagaagaagaac
aaagctggtgtctcagtcaaacccttccaggtgaagaaccacatctgggtgtttgtgaat
gcgttgatcgagaacccgacctttgactcccagaccaaggagaacatgaccctccagacc
aagagctttggttctaagtgtcctctgtctgagaagttcatcagagcagcgaccaactgt
ggtatcgtggagagtatcctgaactgggtgaagttcaaggcccagacacaactcaacaag
aagtgttcttcagtgaagtacagcaagattaaaggcatccccaagctggacgacgccaac
gatgccggtggtaaacactcgtcagaatgcactctgatcctgactgagggagactcggcc
aagtccctggccgtctccggccttggtgtcattgggcgagatcgctatggtgtcttccca
ctacgaggaaaaattctgaacgtacgagaggccacacacaaacagatcatggagaacgca
gagatcaacaacatcatcaagatcgtgggtctgcagtacaagaagagctacgaagaccca
gagtctctgagatccctacgctacggcaagatcatgatcatgaccgatcaggatcaggat
ggctcccatatcaagggtttgctcatcaatttcttccatcacaactggccatccctgctc
aaacacaccttcctggaggagttcatcacgcctatcgtcaaagtgaacaagaataaacag
gagcatgctttctacagcattccagagtttgacgaatggaagaaacagacggtcaacttt
aaaacctggcatataaagtactacaaaggtttgggtaccagtacaagcaaggaggccaag
gagtactttgcagacatggagaaacaccgaatcatgtttagatacgccgggacagaggac
gatgctgccatcacactggcgttcagtaagaagaagactgacgacaggaaggagtggctc
accaacttcatggaggacaggagacagaggaggatgcacggcctgccagagcaatacctg
tacggcacgcaggccaaacacctctcctacaacgacttcatcaacaaagaactcatcctc
ttctccaactctgacaacgagagatctatcccatccttagtggacggtctgaagccaggt
cagagaaaggtactcttcacctgtatgaagaggaatgataagagggaggtgaaggtggct
cagctggctggttcagtggcagagatgtctgcctaccatcatggagagcaatccctgttg
atgacgattgtgaacttggcccagaactttgtgggcagcaacaacgtgaacatcctgcag
ccgctgggtcagtttggtacccgcatcaacgggggcaaggacgctgccagcccccgttac
atcttcaccatgctcagtcccctggccaagatgttgttcccagcggtggactccagcctg
ctgaagttcctgtttgatgacaaccagaaggtggagccagagtggtacatccccatcctc
cctttggtgctggtgaacggggccgagggcatcgggacgggctgggcctgcaagatcccc
aactacgaccacagagagatagtcaacaacctgtatcgcatgctcaacatgcaggaccct
ctgcccatgctgcccagctataagaactttaaaggagtgatccatgagttgggtcagaac
cagtacatggtcagtggagagatctctgtcctggacaagaacaccattgagatcactgag
ctgcccgttcgcacctggacacaggcctacaaggagtcggtgctagagcccatgctccag
gggacagagaagactccagctctgattaatgactataaggagtaccacacggaccaaacc
gtcaagtttgtagtccgcatgtcagaggagaagctggcccaggctgaggctgctggacta
cacaaagtcttcaagctacagtccagcctcacctgcaactccatggtgttgtttgaccac
atgggctgtctgaagaggtatgactcggtccaggacattctcaaggagttctttgagctg
cggttgaactactacaagctgaggaaggattggctagtggggagcctgggggcggaggct
tccaaactgtccaatcaggcacgatttgtgctggagaagatcgaaggaaagatcacaatt
gagaacaagtcgaagagggaactgatcaggatgctggtgcagaaaggctttgagtcggac
cccgtggcggcatggaccaaggcacaggaaaaggctctggaggaggacgatcgtgatggt
aacaacagtgacagctctgtggactctgggtcgtcgtcgggaccaaacttcaactacatc
ctcaacatgcctctgtggtgcctgtccaaggagaaggtggacgagctgctccgacagaga
gacatcaagaaaggagagttgaatgagctgcagaggaagtctccagaggacctgtggaag
gaggacctggcggtcttcattgaagaactggataaaatcgaggcccaggagcaggcagac
atatgtgcaggtaaaggcaccaagctggtgaagggcaaggtgggcaagcccaaggtgaag
aaactccacctggaggagacgttaccctcgccgttcggccgcagggtcgtacccaccatc
acacaggccatgaagactgacgcctccaagaagatgaccaagaagaagaagggtgatgcg
gacctggtgatgaagctggagtttgatgatgagatgggagtactgggatcagatggagga
acaggggagaactccctcaactcctcctctaatacaccagccccaaccccagccaagccc
aaggccccccgggtcaaacgagagaagaaggagccaggtactcccagagccaggaaaccc
ccaacacccaaaggatcgtctggtaggaaggtgaagaagcgtaacccctggtcggaggac
gagtccaaatcagagagcgacctggaggacagtgaacctgtagtcatcccccgagacacc
aagtcacaacgagcctcagcggccaagcccaaatacacctttgatttcagtgaggaagag
gatggaggagaggaagaggaggaggaggatgatgaagatgctgcgtcctcgcccgtccgg
ccctgcaaagacgacttcaccgcctcctccgagactaaagaccgatacaacgaccacagc
gacgaggatgatgaagatatcttccccccgcccaaacaggcaaccaccaccgtctcacct
gcaaagaagaaggaaccagagagtatattctcttcctccaaatcagcctctgaaaagagc
aatgacagtgacgatctgaagttggacagtgacgaggaagacaaggccttctcctcattc
cccagcagctctgccttcgacaaacctgtcccagctaagaaaggacaagaagcagcccgg
tctcaacaagatgcacaatactcagctgagaagctgtcggatgcagctcctaaacccagg
aaagcaccagcacccaaaacaccaccaaaacagaagcttgacacgtctgtctgggactct
gactccgataccggctccaagaagccttcaacagcacttaaaggtaaaagcggagggagg
aagaggaagcagtctggatctgaagaggatgatttcagtcccaagaagacacctgggaaa
tcacccaaaacccctgccagcaggaagccatcaaagaaagcagctgtgaccccgcccccc
atgtcagatcatgatgatgatgtggactccaaccgtttcagccaatccagcgtggcgtcc
cgagaacgaccgggcagaggcagggccaagaaggaagtgaagtactttgctgagtcaggg
tcagacgatgatcagtacgacatgttcgactag
DBGET
integrated database retrieval system
