Salmo trutta (river trout): 115173825
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Entry
115173825 CDS
T08542
Name
(RefSeq) iroquois-class homeodomain protein irx-1-like
KO
K24889
iroquois-class homeodomain protein IRX
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
stru03000
]
115173825
Transcription factors [BR:
stru03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
115173825
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Motif
Other DBs
NCBI-GeneID:
115173825
NCBI-ProteinID:
XP_029588124
Ensembl:
ENSSTUG00000015214
UniProt:
A0A673YMI6
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Position
34:22846115..22850359
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AA seq
451 aa
AA seq
DB search
MSFSQLGYPQFLSGSQEVYGGDRAGSGRDGGAESGVNQAATAAAVSSMLGMYGNPWAAQN
YSAFLPYSGADLALISQMNSQYDLKDSPGVHPGGLAVHTGAGFYPYGQYGYGDPNRAKAA
TRETTSTLKAWLQEHQKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKVTWG
RSAEDRDGRIFSSDNEDEPEKQESEDEEDEEIDLESIDIDKVEENRGDQREGEGEGKLAS
DSSSLESQRKLSVEALSGMEGPISLIKAPVGACKNAVDLSPNGPGCQRPPQNKPKIWSLA
ETATSPDSSHKPSPAASAPHAATSPSHHPALLPGHGIYTCQIGKQLHNWANAAFLSANSL
LGVRSLLGTANPAGHHMPLHGALKRQDARATQASGASEDESGDESSESFSPKRDDDVNIR
RSGSPKSPFQLITDRSHHGTAQRALSTISTI
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgtctttctcgcagctggggtacccccagtttctaagtggctcccaggaggtttatggg
ggcgaccgggccggctctggccgggatggaggcgccgagagcggcgtgaatcaggcagct
accgccgctgctgttagctcgatgctggggatgtatggtaacccgtgggcggctcagaac
tacagcgcgtttctcccctacagcggtgcagacctcgccctcatatcgcaaatgaactcc
cagtatgatctgaaggacagccccggagttcacccgggaggtctggctgtccacaccggc
gcggggttctacccgtatggccagtatggctacggcgacccgaaccgagccaaggccgcc
accagggagaccaccagcactctgaaggcctggctgcaggaacaccagaagaacccgtat
cccaccaagggagagaagatcatgctggccatcatcaccaagatgacacttacacaggtg
tccacgtggttcgccaacgcgcgcaggcgtctgaagaaggagaacaaggtgacgtggggc
cgcagcgcggaggaccgggatggacggatcttcagtagtgacaatgaggacgagcctgag
aaacaggagagcgaggatgaagaggacgaggagatcgatttagagagtatcgacattgat
aaggtcgaggagaaccgcggagatcagagggaaggggagggagaggggaagctggcatcg
gattcgagtagcttggagagccagaggaagctgtctgtggaagccctcagtggcatggag
ggtcctatttctctcatcaaggcgcctgttggtgcttgtaaaaacgcagtggatctttcc
cccaatggaccggggtgccagaggcctccacagaacaaacccaaaatctggtctctggca
gagacagccacaagccccgacagttcccataaaccttccccggctgcctcagctccacac
gcggccacgtctccctcccatcacccggccctactcccgggtcatggaatatacacttgc
cagatagggaagcagctccacaactgggccaacgcagcgttcctcagtgccaactctctt
ctgggcgtcaggtcgcttctcggcacggcaaacccagctggacaccacatgcctctccat
ggcgcactgaagcgtcaggacgcaagggcgacgcaggcttcaggggcatccgaggacgag
agtggagatgagtcgtcggagagcttcagtccaaagcgagatgatgacgtgaatattcgc
aggtctggctcgccgaagtctcccttccagctgatcaccgacagatctcaccacggaacc
gcgcagcgcgctctctcgaccatttccacaatatga
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