Salmo trutta (river trout): 115173886
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Entry
115173886 CDS
T08542
Name
(RefSeq) sorting nexin-13-like isoform X1
KO
K17925
sorting nexin-13
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
stru04990
]
115173886
Domain-containing proteins not elsewhere classified [BR:
stru04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
115173886
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PXA
Nexin_C
PX
RGS
Rep3_C
DUF6395
Motif
Other DBs
NCBI-GeneID:
115173886
NCBI-ProteinID:
XP_029588232
Ensembl:
ENSSTUG00000038634
LinkDB
All DBs
Position
34:complement(24784152..24821017)
Genome browser
AA seq
995 aa
AA seq
DB search
MFAEASLSVWGWGGLGVVLFLITFGPFAIFYLAFYICCVVGGGFAVTLLFGKTNSERHLE
KCEHSYLPATQTGILKTLDEMRLEQKPIKIDRRLTGSNYIDEPLQQVIQFALRDYIQYWY
YTLSEDESFLLEIRQTVQNALVQFSTRSKEVDWQPYFTTRLVDDFATHLRVFRKAQDRLE
RRDDNKQRDLSEEMVESFFEAEVEMERNVCRDVVCTSLKDEEGFLRDLCEVLLYLLLPPG
DFHNKNMRYFLREILARGVLLPLVNQLSDPDYINQFVIWMIRDSSCNYEAFMNILKLTDK
VSELEAVKDKALEELQYLRSLDTAGDDINVIKNQINSLLFVKKVCETRIQRLQSGKEVDT
LKLAANFGKLCIIPLEHILVHNIALQFFMDYMQAAGAQAELFFWLTVEGYRVTAQQQLEV
MEGWQKDGKKGGSTKGLLKAAALGVYEQYLSDKASPRVQVDEVSVVKLREKLQKEGDPTP
EIFDDIQRKVYDMMLRDERYYPSFRQSPLYIRMLAELDMLKEPSYRGSDDGDGESFNGSP
TGSINLSLDDLSNSCHDDNIQLHAFISDTDMCGYNSSGLKNVTLSKCLDAVRSLDAVLSP
NTTRRQSRVCNDHGKTYALYAITVCRRNHDGSEDSWKTYRRYSDFHDFHMRITEQVKFEN
LTSILKLPGKKTFNNMDRDFLEKRKKDLNAYLQLLLNPEMVKACPTLVPYVYDFLENKQY
SKGKGDFARKMDTFVNPLRSSMRNVSNAVKRLPDSLAEGMNTAADNMGRMSEKLGQDIKQ
SMFKVPPLLPKSDVDPEHCRVSAQLDDNVDDNIPLRVMLLLMDEVFDLKERNQWLRRNIK
NLLQQLIRATYGDTINRKIVDHVDFMTAPEQVADYVKKFRDSYWPNGILAESPPRRDKNI
RMRTRVAAKTNLLGIMPDELKHIIGADTTRKGILRVFDMFQHGPMNRRLVYVLLEGFLET
MFPQYKFPELFVKLHSRSPRTARYTQKLKSTSLKR
NT seq
2988 nt
NT seq
+upstream
nt +downstream
nt
atgtttgcagaggccagtctgtctgtttggggatgggggggtctaggagtggtgctgttc
ctcatcactttcggacccttcgctatcttctacctggccttctatatctgctgcgttgta
ggcggtggttttgcggtcactctgttgtttgggaagactaactcagagagacatctagag
aagtgtgaacactcctacctgccagccacgcaaacgggtatactgaagacgttggatgag
atgaggttggagcagaagcctataaagatagacaggagactgactggctccaactacata
gacgagcctctgcaacaggtcatccagtttgcattgagagattatattcagtattggtat
tacactctgagtgaggatgagtctttcctgctggaaatcagacagactgtccagaatgct
ctggtccagttctctacacggtctaaagaggtggactggcagccttatttcaccaccaga
ctggtggatgactttgctactcacctccgagtcttcagaaaggcccaggacagactggag
cgcagggatgacaataaacaaagggacttgtcagaggagatggtggagtcattctttgag
gcggaggtagagatggagaggaacgtctgcagagacgtggtctgcacctccctgaaggat
gaagaagggttcctaagggacttgtgtgaggtgctgctctaccttttactacctcctgga
gacttccacaacaagaacatgagatacttccttagggagattctggcgcgaggtgttctc
cttcccctggtcaaccagctgagtgatcctgattacatcaaccagtttgttatctggatg
atccgggactctagctgtaactacgaggcatttatgaacatcttgaagctgacagacaaa
gtgtctgagctggaggctgttaaagacaaggccctggaggaactacagtacctacgatca
ctggataccgcaggagacgatatcaatgttataaagaatcagatcaacagtctgttgttt
gtgaagaaggtctgtgagaccaggatacagagactacagtcagggaaggaagtagatact
ctaaaactagcagctaatttcggcaagctgtgcatcataccgctggaacacatcctcgtt
cacaacatcgccttgcagttctttatggactacatgcaggcggctggagcccaggcagag
ctgttcttctggctgacagtagagggctacagagtaacagcccagcaacaactagaggtg
atggagggatggcagaaggatggaaagaagggaggttccactaaaggactgctgaaggct
gcagcactaggggtctatgaacagtacctgtctgataaggcgtcccccagggtgcaggta
gatgaggtgtctgtagtcaaactgagagagaagctacaaaaggaaggcgaccccacgcca
gagatattcgacgacatccagagaaaagtgtatgacatgatgcttcgtgatgagaggtac
tacccgtcgttcagacagagtcccctctacatcaggatgttagctgaactggacatgctg
aaagaaccctcttatagaggatcagatgacggagatggagaatcgttcaacggttctcca
acaggaagcattaatctatctctggatgacctttcgaattcctgccatgacgacaatata
cagctacacgccttcatctctgacacagatatgtgtgggtacaacagtagtggccttaaa
aacgttaccctgtcaaaatgccttgatgctgtaaggagcctagatgcagtgttgtctcct
aacactacaagacggcagtccagggtgtgtaacgaccacggcaagacctacgccctctac
gccatcaccgtgtgccgccgtaaccacgacggcagcgaggactcctggaaaacctaccgc
cgctactccgacttccacgacttccacatgaggatcacggagcaggtaaagtttgagaac
ttgacgtcgatcctgaagctgccagggaagaagacgttcaacaacatggacagagacttc
ctggagaagaggaaaaaagatctcaacgcttacctacagctgctgctgaatccagagatg
gtgaaggcctgtcctactctcgtcccctatgtctatgacttcctggagaataagcaatac
agcaagggcaagggagacttcgcacgcaagatggatacgtttgtgaacccgctgcgtagc
tcgatgcgtaacgtgtccaacgctgtgaagagactgccagacagtctggctgaaggaatg
aacactgctgctgacaacatgggacgcatgtcagagaaactgggacaggacatcaaacag
tccatgttcaaggtgcctccactgctccccaagtctgacgttgacccagagcactgccga
gtctcggcccagctggacgacaacgtggatgataacatccctctgcgtgtgatgctgctg
ctgatggatgaggtgtttgacctgaaggagaggaaccagtggcttcgcaggaacatcaag
aaccttctgcagcaactcatcagagccacatacggagacactatcaacaggaagatcgtt
gatcatgtggacttcatgacagctccagaacaggtggcagactacgtcaagaagttcagg
gattcatactggcccaacggaatcctagcagagtctccgccccgccgggacaagaacatc
cgcatgaggacacgggtcgccgccaagaccaacctattgggaatcatgccagatgagttg
aagcacatcataggggcggatacgactcgtaaaggcatccttcgtgtgtttgacatgttc
caacacggaccaatgaatcgtcggctggtctacgtgctcctagaaggattcctggagacc
atgttccctcagtacaagttcccagagctgtttgtcaaactgcactcccgttcgccgcgc
acagctagatacacacagaaacttaagagcacctccctgaagaggtga
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