Salmo trutta (river trout): 115173921
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Entry
115173921 CDS
T08542
Name
(RefSeq) rho family-interacting cell polarization regulator 2-like isoform X1
KO
K24818
Rho family-interacting cell polarization regulator
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
stru03037
]
115173921
04990 Domain-containing proteins not elsewhere classified [BR:
stru04990
]
115173921
Cilium and associated proteins [BR:
stru03037
]
Other cilia and associated proteins
Stereociliary proteins
115173921
Domain-containing proteins not elsewhere classified [BR:
stru04990
]
Other domain-containing proteins
HEAT repeat domain-containing proteins
115173921
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PL48
HR1
SHE3
HR1_TOCA
Motif
Other DBs
NCBI-GeneID:
115173921
NCBI-ProteinID:
XP_029588289
Ensembl:
ENSSTUG00000018036
LinkDB
All DBs
Position
34:26074977..26158220
Genome browser
AA seq
1114 aa
AA seq
DB search
MAFADIGEDQDDLNEVMREEMEDVFIYDGVSSRVPEIMAAGTHSPGGPNGIIRSQSFAGF
STLQERRSRCNSFMGNSAVQKKPTSKPKKPHLSGHKASSGSRVPQPKRVEEVYGALKQGL
DEYLEVYQTELDKLTSLMKDMKRNSRLVRQDGVLYDLDKQIKTIERYMRRLEFHMSKVDE
LYEVFCIQRKLREGASKMKQAFSASPSTKATRESILEVNRRYKEYTENMSTFEVELENLL
GEFHIKMKGLAGFARLCSGDQYEIFMRYGRQRWKLKGKIEVNSRQSWDGEEMVFTPLITD
LINIKVTELKGLATHILVGSVICETKDLFTAMPQVVAVDVNDLGTIKLNLEVTWFPFDVE
DLTLSSGNVSKATALQRRVSVYSQGTPETPTFQDQSFFEWHPRPSPTQHRFSFFHALRNS
LLEKLRRSRSFGDLASLHPRSKSRLEVYSTLPDDVFENGGCGNSECKRLSFTFSDTSVSS
LSPSLAPGQSNPEITVTPPDTNHWPQIPPREDKGVEEMVRVHADVVEEEGEEEEESGDSG
GSVSASLVSEDVESEWERVEFQLNVGSSSLCSESQLSAVSPEDVFLDHAGPDRDGDEDDS
SELLKPVELDTEEPGSLTRQLVRRLTSSDVLPEVVGLSWAGEGSRAFLESSLEEALHSLL
LRLESPGQRCRELQDLEQEVMRLEDLLKCRLPGHRSRSSSPSLTVESALESFDFLNTSDF
DDDDTGDDHALHHSVFFDMEVERIGPGGQHPEARGHLSEALTEDTGVGNSVAGSPLPLTT
GNENLDMAIVIHLQYCEHLIQLLSSGGNPWQRRAQLQKLSAQTQLLEELGEFSTERLGCI
TSAADVLPGLAEMPGLMALWSECSGSGGEFHTTLDRVLKHMHLSYTSPLQERHPHTTAET
VIWLVVSEMVDRSELASPPPSALSQDVLTVFQFHSYISEHSVGDMEEHLLLVAREAVFAE
GLSSGDSERCLKELEEVSHTGLCPQLQTLRALASLLSHKDPQLSKAATAYITSAASHTPF
RSKAVDCYTQSLSEGGVVTQRSACAALSCLQAVESIRAVVLLCDSADEELHHIAIETLLT
LGEEGRLAYEQLDTVPRELVQLGTRRGNAVTTAF
NT seq
3345 nt
NT seq
+upstream
nt +downstream
nt
atggcttttgccgacattggagaggaccaggatgacctaaatgaagtgatgcgtgaggag
atggaggacgtcttcatctatgatggagtgtcgtcccgcgtcccagagatcatggcggct
ggaacccactcccccgggggacccaatgggatcatccggagccagtccttcgctggcttc
agcacgctacaggaaagacgctcgcggtgtaactcgttcatggggaactctgcggtgcag
aagaagcccacgtccaagcccaagaagccccatctgtcagggcacaaggccagcagcggc
tccagagtgccccagcccaagagggtggaggaggtgtacggggccctcaaacaaggcctg
gatgagtatctggaggtatatcagactgagcttgataaactcacctctctgatgaaggac
atgaagaggaactccagactggtgagacaggatggagtcctgtacgatcttgacaagcaa
atcaaaaccatcgagaggtacatgagacggttggagtttcatatgagcaaggtggatgag
ttgtatgaggtgttctgtatccagcggaagctgagagagggagccagtaagatgaagcag
gccttctctgcttctccctccaccaaggccaccagagagagcatattagaggtcaaccgc
agatacaaggagtacacagagaatatgagcacgtttgaggtggagctggagaacctgttg
ggggaattccatatcaaaatgaaaggtcttgctggctttgctcgtctgtgttcaggagat
cagtatgagatcttcatgcggtatgggcgtcagcgctggaagctgaaagggaagatagag
gtgaactccagacagagctgggacggagaggagatggtcttcacgcccctcatcacagac
ctcatcaacatcaaagttaccgagctgaagggtttagccactcacatcctagtgggcagt
gtgatctgtgagaccaaggacctgttcacggccatgcctcaggtggtagctgtcgatgtc
aacgacctgggaacaatcaaactcaatctggaggtcacatggtttccgttcgatgtggag
gacctgaccctgtcttcaggcaacgtgagcaaggccaccgccctgcagagacgggtgtct
gtctacagccagggcacgccagagacacccaccttccaggaccagtccttctttgagtgg
cacccccgcccctccccaacccagcatcgcttctccttcttccacgccctgaggaactcc
ctgttagagaagctgagacgcagtcgctcctttggcgacctggcctccctccaccccagg
tccaagtccaggctggaggtctattccaccctccctgacgacgtctttgagaacggtggg
tgtggcaactctgagtgcaagcgcctctctttcaccttttccgatacgtcagtctcctcc
ctcagcccaagcctcgcccccggtcagtccaaccccgaaatcactgtcacgccgcctgac
accaaccattggcctcaaataccccccagggaagacaaaggggtagaagagatggttcgg
gtgcatgcagacgtagtggaagaggagggtgaggaggaagaggagagtggtgacagcggc
ggtagcgtgagtgctagcctggtcagcgaggatgtggagtcagagtgggagagggtagag
ttccagcttaacgtaggttcctcctctctctgctcggagagccagttgtccgctgtgtct
cctgaggatgtgttcctggaccacgctgggcctgacagggatggagatgaggacgacagc
tcggagctgctgaagcccgtggaactggacactgaagaaccaggcagcttgaccaggcaa
ctggtgaggaggctgacgtcgtccgacgttctgcccgaggtggtgggtctgagctgggcc
ggggagggaagcagggccttcctggagagcagcctggaagaggccctgcacagcctgctg
ctgaggctggaatcaccgggacaacgctgtagagagctgcaggacctggaacaggaagtg
atgcgcctggaggacctgctcaagtgtcgtctcccgggccacaggagcaggtcgtccagc
cccagcctgacggttgagagcgctctggagagctttgacttcctcaacacctccgacttc
gacgacgatgacacgggtgatgaccacgccctccaccactctgtgttctttgacatggag
gtggagaggattgggcctggaggccagcacccagaggccaggggccacctgagtgaagcc
ctgacggaggacaccggggtgggcaacagtgtggctggcagccccctgcctctcaccacc
ggcaatgagaatctggacatggccatcgtcattcatctgcagtactgcgagcatctcatc
cagctcctgtccagtggagggaacccttggcagcgtagagcccagctccagaagctctca
gctcagactcagctgttagaggaacttggagagttcagcacagaacgcctggggtgcatc
acttcggctgctgacgtgctcccagggctggcagagatgccagggctgatggctctgtgg
tccgagtgtagtggttctggaggagagttccacactacactggaccgggtgcttaaacac
atgcacctcagctacaccagtccactgcaggagaggcacccacacaccacagctgaaaca
gtgatctggctggtggtgagtgagatggtggacaggagtgaactggcctcccctcctccc
tcggccctgtcccaggacgtcctcacagtgttccaattccacagctacatctcagagcac
agcgttggggacatggaggaacaccttctgctggtggccagagaggctgtgtttgcggaa
ggcctgagcagcggcgactcggagcgttgtctaaaggaattagaagaggtgtcacacacc
ggcctgtgtccccagttgcagaccctcagggccctggcctccctcctctcacacaaagac
ccccagctcagcaaggccgcaactgcctacatcacctccgctgcctctcacacacccttt
aggtcaaaggcggtggactgctacacacagtccttgtcggaggggggagttgtaacccaa
aggtctgcctgcgctgctctcagttgtctacaggcggtggagagtatccgagcggtggtg
ttgctgtgtgactcggcagacgaggagcttcaccacattgccatagaaaccctgctcacc
ttgggagaggaggggcgtctggcgtatgagcagctggacacggtgcccagggagctggta
caactggggacacggcgagggaacgctgtcaccaccgccttctga
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