KEGG   Salmo trutta (river trout): 115173960
Entry
115173960         CDS       T08542                                 
Symbol
gsdme
Name
(RefSeq) gasdermin-E isoform X1
  KO
K22146  gasdermin-E
Organism
stru  Salmo trutta (river trout)
Pathway
stru04623  Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:stru00001]
 09150 Organismal Systems
  09151 Immune system
   04623 Cytosolic DNA-sensing pathway
    115173960 (gsdme)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:stru02000]
    115173960 (gsdme)
Transporters [BR:stru02000]
 Other transporters
  Pores ion channels [TC:1]
   115173960 (gsdme)
SSDB
Motif
Pfam: Gasdermin Gasdermin_C
Other DBs
NCBI-GeneID: 115173960
NCBI-ProteinID: XP_029588348
Ensembl: ENSSTUG00000019636
LinkDB
Position
34:28846912..28864780
AA seq 492 aa
MFAKATANFVRQIDPDGSLISVSRLNDSDKLVPMALVVKRNRFWFWQRPKYLPSDFTLSH
LLLGDKELTPDVSESDFLSYEGRFVDNLSGKLDAKSGYISVNVEGRGSSKLQLSFGKLKK
QDVDVQKLLLASNDRMVDMQHVLVQQSQKRAEVFAVLKERILTTTPCSISEQVQEQGTCQ
GVLGLLGKLGTQSVKVCVQENSSIEMDSDVSLEIPPLTVIAYSLIELEVRKDGHYELCLQ
HGTLGGFEADSGKTSPSQDSFDTLCVVDGLEWAEKEIPEGAPLSALQKNLQHLEVYLHQL
VVLPESTRSTLFQRLCEVLVDRTTLTVLEHTLEGLCRGEDVDPTEVKELSVSQIKSVSAL
SDLVQKFPTNQIQADGASIPLHLTATHLLVSALEALPDAALTLLGESSPDVLEALNTLLK
VNGQSLPFESLPLPLQEEGAFHWAEQLLLSSNVMLRRETDRLWAETGKKPGVFPLVMCIA
VQGLTSLYTGKG
NT seq 1479 nt   +upstreamnt  +downstreamnt
atgtttgccaaggcaactgcaaactttgttcgtcagatcgacccagatggatccctgatc
tccgtctcccgtcttaatgactcagacaagttggttcccatggcgctggtcgtcaagcgc
aaccgtttctggttctggcaacggcccaagtacctgccctctgacttcacactcagtcac
ctgttgctaggagacaaagaactcactccagacgtgtctgaatcagacttcctgtcctat
gaggggaggtttgtagacaacctgagtgggaagctggacgccaagtctgggtacatcagt
gtcaatgtggaggggcggggctcctcaaagctccaattatcattcggcaagctgaagaag
caagatgttgacgtacagaagttactgctggcctccaatgacaggatggtggacatgcag
catgtgctggtgcagcagagtcagaagcgtgccgaggtgtttgctgtgttgaaggagagg
atcctgaccaccaccccctgctccatctcagaacaggtccaggagcagggcacctgccag
ggggttctgggactactgggcaaactggggacacagtctgtaaaggtgtgtgtgcaggag
aatagcagtatagagatggacagtgacgtttccttggagattccacctctcactgtcatc
gcctacagcctcatagagctagaggtcaggaaagacggacactatgagctgtgtctacag
catggtactcttggaggattcgaggcagactctgggaagacctcgccttcccaggattcc
tttgataccctgtgtgttgtggacgggctggagtgggcggagaaggagattcctgaagga
gcaccactcagcgcactgcagaaaaacttgcagcacttggaggtctatctacatcagtta
gtggttctcccagagtctacccggtccactctgttccagagactctgtgaggttctagtg
gacagaaccacactcacggttctggaacacacgttggaggggttgtgtagaggtgaggac
gttgaccctacagaggtaaaggagttgtctgtttctcaaatcaaatctgtctccgcccta
tcggacctggtccagaaattcccaacaaatcagatacaggctgacggagcctccatcccc
ctccatctgactgccactcacctgctggttagcgccttggaggcgttgcctgatgctgct
ctgactctgctgggagaatctagccctgatgtcctggaagccctcaatacactactaaag
gtaaatggtcagtccctcccctttgagtcactgcccctccccttgcaggaagagggggca
ttccattgggcagagcagctcctcctctcctccaatgtgatgctgcggagagagactgac
aggctgtgggcggagactggaaaaaagccaggagtgtttccattggtcatgtgcattgct
gtgcaaggacttacatctctgtacactgggaaggggtag

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