Salmo trutta (river trout): 115173960
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Entry
115173960 CDS
T08542
Symbol
gsdme
Name
(RefSeq) gasdermin-E isoform X1
KO
K22146
gasdermin-E
Organism
stru
Salmo trutta (river trout)
Pathway
stru04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
115173960 (gsdme)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
stru02000
]
115173960 (gsdme)
Transporters [BR:
stru02000
]
Other transporters
Pores ion channels [TC:
1
]
115173960 (gsdme)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Gasdermin
Gasdermin_C
Motif
Other DBs
NCBI-GeneID:
115173960
NCBI-ProteinID:
XP_029588348
Ensembl:
ENSSTUG00000019636
LinkDB
All DBs
Position
34:28846912..28864780
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AA seq
492 aa
AA seq
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MFAKATANFVRQIDPDGSLISVSRLNDSDKLVPMALVVKRNRFWFWQRPKYLPSDFTLSH
LLLGDKELTPDVSESDFLSYEGRFVDNLSGKLDAKSGYISVNVEGRGSSKLQLSFGKLKK
QDVDVQKLLLASNDRMVDMQHVLVQQSQKRAEVFAVLKERILTTTPCSISEQVQEQGTCQ
GVLGLLGKLGTQSVKVCVQENSSIEMDSDVSLEIPPLTVIAYSLIELEVRKDGHYELCLQ
HGTLGGFEADSGKTSPSQDSFDTLCVVDGLEWAEKEIPEGAPLSALQKNLQHLEVYLHQL
VVLPESTRSTLFQRLCEVLVDRTTLTVLEHTLEGLCRGEDVDPTEVKELSVSQIKSVSAL
SDLVQKFPTNQIQADGASIPLHLTATHLLVSALEALPDAALTLLGESSPDVLEALNTLLK
VNGQSLPFESLPLPLQEEGAFHWAEQLLLSSNVMLRRETDRLWAETGKKPGVFPLVMCIA
VQGLTSLYTGKG
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgtttgccaaggcaactgcaaactttgttcgtcagatcgacccagatggatccctgatc
tccgtctcccgtcttaatgactcagacaagttggttcccatggcgctggtcgtcaagcgc
aaccgtttctggttctggcaacggcccaagtacctgccctctgacttcacactcagtcac
ctgttgctaggagacaaagaactcactccagacgtgtctgaatcagacttcctgtcctat
gaggggaggtttgtagacaacctgagtgggaagctggacgccaagtctgggtacatcagt
gtcaatgtggaggggcggggctcctcaaagctccaattatcattcggcaagctgaagaag
caagatgttgacgtacagaagttactgctggcctccaatgacaggatggtggacatgcag
catgtgctggtgcagcagagtcagaagcgtgccgaggtgtttgctgtgttgaaggagagg
atcctgaccaccaccccctgctccatctcagaacaggtccaggagcagggcacctgccag
ggggttctgggactactgggcaaactggggacacagtctgtaaaggtgtgtgtgcaggag
aatagcagtatagagatggacagtgacgtttccttggagattccacctctcactgtcatc
gcctacagcctcatagagctagaggtcaggaaagacggacactatgagctgtgtctacag
catggtactcttggaggattcgaggcagactctgggaagacctcgccttcccaggattcc
tttgataccctgtgtgttgtggacgggctggagtgggcggagaaggagattcctgaagga
gcaccactcagcgcactgcagaaaaacttgcagcacttggaggtctatctacatcagtta
gtggttctcccagagtctacccggtccactctgttccagagactctgtgaggttctagtg
gacagaaccacactcacggttctggaacacacgttggaggggttgtgtagaggtgaggac
gttgaccctacagaggtaaaggagttgtctgtttctcaaatcaaatctgtctccgcccta
tcggacctggtccagaaattcccaacaaatcagatacaggctgacggagcctccatcccc
ctccatctgactgccactcacctgctggttagcgccttggaggcgttgcctgatgctgct
ctgactctgctgggagaatctagccctgatgtcctggaagccctcaatacactactaaag
gtaaatggtcagtccctcccctttgagtcactgcccctccccttgcaggaagagggggca
ttccattgggcagagcagctcctcctctcctccaatgtgatgctgcggagagagactgac
aggctgtgggcggagactggaaaaaagccaggagtgtttccattggtcatgtgcattgct
gtgcaaggacttacatctctgtacactgggaaggggtag
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