KEGG   Salmo trutta (river trout): 115173991
Entry
115173991         CDS       T08542                                 
Name
(RefSeq) vacuolar protein sorting-associated protein 28 homolog
  KO
K12184  ESCRT-I complex subunit VPS28
Organism
stru  Salmo trutta (river trout)
Pathway
stru04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:stru00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    115173991
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:stru04131]
    115173991
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:stru04147]
    115173991
Membrane trafficking [BR:stru04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-I complex
    115173991
Exosome [BR:stru04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   115173991
  Exosomal proteins of other body fluids (saliva and urine)
   115173991
  Exosomal proteins of colorectal cancer cells
   115173991
  Exosomal proteins of bladder cancer cells
   115173991
SSDB
Motif
Pfam: VPS28
Other DBs
NCBI-GeneID: 115173991
NCBI-ProteinID: XP_029588421
LinkDB
Position
34:complement(30040807..30054889)
AA seq 223 aa
MFHGIPVAGGMGGAPVNKPELYEEVKLYKNAREREKFDNMAELFAVVKTLQALEKAYIKD
CVTPNEYTAACSRLLVQYKAAFKQVQGSDVGSIDDFCRKYRLDCPLAMERIKEDRPITIK
DDKGNLNRCIADIVSLFITVMDKLRLEIRAMDEIQPDLRELMETMNRMSNMPPDNEAKDK
VTLWLTTLSSMSASDELDDSQVRQMLFDLESAYNAFNRFLHSS
NT seq 672 nt   +upstreamnt  +downstreamnt
atgtttcacggaatacctgtcgcaggaggtatgggaggagctcctgtcaataaaccggaa
ttgtatgaggaagtaaaattgtacaagaatgccagagagagagagaagtttgacaacatg
gcagagctgtttgctgtggtgaagacccttcaggccctggagaaagcttacatcaaagac
tgtgtgactcctaatgagtacacggctgcttgctccaggctactggtgcagtacaaggct
gctttcaaacaggtccagggatctgacgtgggttctatcgatgacttctgcaggaagtac
agacttgactgcccgctagctatggagagaatcaaggaggatcgaccaatcaccatcaag
gatgacaagggcaacctgaatcgctgcattgctgatatcgtatcgctctttatcacggtg
atggacaagctacgtctggaaatccgggcgatggatgagatccaaccagacctgagagag
ctgatggagaccatgaacagaatgagcaacatgcccccagacaatgaggccaaggacaaa
gtcaccctctggttgaccactctcagcagcatgtcagcctctgatgagctggacgactcc
caggttcgccagatgctgtttgacctggagtcagcctacaacgccttcaaccgcttctta
cactcatcctaa

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