Salmo trutta (river trout): 115173993
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Entry
115173993 CDS
T08542
Name
(RefSeq) nuclear pore complex protein Nup153 isoform X1
KO
K14296
nuclear pore complex protein Nup153
Organism
stru
Salmo trutta (river trout)
Pathway
stru03013
Nucleocytoplasmic transport
stru03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
115173993
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
115173993
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stru03019
]
115173993
Messenger RNA biogenesis [BR:
stru03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
115173993
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup153
Zn_ribbon_RanBP
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
115173993
NCBI-ProteinID:
XP_029588424
UniProt:
A0A674A1U9
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All DBs
Position
34:complement(30153895..30189424)
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AA seq
1419 aa
AA seq
DB search
MADTGGGKIRSRRYHIASKPYAKSKQQQSGLISRVTDTVKSIVPSWMQKYFTNGETAEGG
GAMLGEEPNSQAPPNGSEELDPLPDGWDSAEPATSNTEPSTSRVSLNFQDVLSRPPLNRS
HLHFPSLDASPALGRPSSLFSQPSTSSAPFAGGPFAGASTSFSLVKEIKDNSSQHEDDNI
STTSGFSSRASEKDVPNFKTTLLPQLCSLEMDRTHSGPQQSQSSLKKPAFNLSVFGTSST
VSVSQSSQSSTSTLSSSVLNASQLGDSPFYPGKTTYGGAAAVRTARSRTATPYQAPLRRQ
IKAKPAGAPPCGVTSATARRILQSLERMSSPLADAKRIPSTVSSPLSKSPDGSTLDLSHF
QAPKKRLDSPLPPVQKLVIPAAALVSGSRSMSFRPSLTPGGLTQTPGGTPTRQSPLIPEA
VAGPCQSTSSSLPTYPLSSTPATSSTGSGGGKMKRERTSTRPSSKRPEDEIAELPALPAN
TSISLPSFPKPVVTTTPVLVEPVINEVPPTTAPSTPPSTPFTFSSPIVMTTAASPPSLSP
SSGFTFSAPVVKTGLSLSNGKMVTPVVAAVKHAASESMEEFEGPFKPAKILKQGSVLELL
KGPGFAVPFTQTSPVPKAPQETPALSTTTTTPSLGDLFKAPTGSLDCDVCMVKNKPTATK
YVACMTPHPNSTLAKTDSEQFTTLSGLEGSTTTTAAGFEALFTKSAGSWDCDTCLVQNKP
QAVKCVACETAKPGTGVKATLTLHAFSEAKTLPAAAPLLGFGDKFKKPEGAWECDMCMVQ
NKAQDIKCVSCMSTKPGGTAATPSLTPAPVSTTPLLGFGAQFKKPDGAWECDVCCVQNKG
ADQACVACQTLKPGAKVEPKSFGSSSFGIQSLSDTGSGGFKFDMGASSDSASGSGGFKFG
GTLSDSSSGGFKFGAAASSDTTSTDTSSSAGFKFGSSTEGFKFGASTASTPAADEGKTAE
APSMGAGFRFGISGGISFGTAAAASTESKPSDGGFFGLSKPTTTTSTLSLPVSTENDSGA
STETTTTTAADPIFGKLAEPPALATPLGGSIFEESLEKDQDPFTIGKSEKEASMGSGFLF
SAASKEAEASAPPGGFSFFMVDPSADQPKAPTFTFGKLADSETPAAKAPKPSFSFGQSAT
DTAASKPAFGFMATTTTSTSTTPAPRLFGPTSSTTPAPIPAPSTFLFGQSASSEATPAKS
FLFGQSQDSLPAPAASLNPGPAQPFLFGSGPNTAAPSFAFGAAPLSTASSTAPSAAPAPF
VFSPASSSGFGSGQAPTFGQGTSQPNAPAFGSPTPSPFPATASQPPAFGGKANSVPVFDQ
QANSTPAFGSSATPGGGFQFGGVSAFGTSSNSTGVFAFGGAPGGSPAPSATPSMAPQPSA
PGGGFNFIGSTKSTTFTAAPAGQNSIARRKIKTAVRRKK
NT seq
4260 nt
NT seq
+upstream
nt +downstream
nt
atggcggacacgggtggagggaaaattagaagcagaagatatcatatcgcttctaaacct
tacgccaaaagcaaacagcagcagtcaggcctgattagtcgagtgacagacacagtcaag
agcatcgttccttcctggatgcagaaatacttcacaaacggggagactgcagaaggggga
ggggccatgttgggggaggagccgaacagtcaggcccctcctaatggcagtgaggagtta
gacccccttcctgatggatgggactctgcggagcccgctaccagtaatacagagccttcg
acaagcagggtatccctgaacttccaggatgttctgtcgaggccccccctcaaccgctcc
cacctccatttcccctccctggatgcctcccctgccctggggagaccaagctcccttttc
tcccagccctccacctcctccgcccccttcgctgggggccccttcgctggggcgtcgacc
agcttctccctagtcaaggagatcaaggacaacagctcccagcacgaggatgacaacatc
tccaccaccagcggcttctcatcacgtgcatcagaaaaagatgtaccaaactttaagacc
acgttgctaccccagctctgttctctggagatggaccggacccactctgggccccagcag
tcccagtccagtctcaagaagcctgcgttcaacctgtctgtctttgggacttcctccact
gtgagtgtcagtcagtcaagtcagtcctccacttctacgttgagcagttcagtgctgaac
gccagtcagttgggggattcccccttctacccagggaagactacctacgggggagcagct
gctgttagaacagcccgctcacgcacagccacaccttaccaggctccattgcggcgacag
atcaaggctaagcctgctggggctccgccctgtggggttaccagcgctaccgcccgacgc
atcttacagtccctggagcggatgtccagccccctcgctgatgccaagagaatcccctct
acggtgtcctctcccttgtcaaaatcccctgatggcagcactctagacctttcacatttc
caggccccaaaaaaacggctggactctcccctccccccagtccagaaattggttatcccg
gctgcagcgttggtgtctgggagccgctcaatgtccttcaggccctctctgacccccggg
ggcctgacccagacccccggaggcacgcccacaagacaatcccctctgattcctgaagca
gtggcaggtccttgtcaaagcacaagcagcagcctgcccacctaccctctgtccagcact
cctgcaacaagcagcacagggtcaggaggagggaagatgaagagggagaggaccagcaca
agaccctcgtccaaacgacctgaagacgagattgctgagctaccggccctgccggccaac
acatcaatcagtctgcccagcttccccaagcctgttgtcacgaccacacctgtcctggtg
gagcccgtcattaacgaggtgccaccgactacagccccctctacccctccctccacacct
ttcactttctcctcccctattgtcatgacaactgctgctagcccaccgtccttatccccg
tcttctggatttaccttcagtgcacctgtagtgaaaacgggtctgtcactatccaacggg
aagatggtcaccccagtagtggcagcagtgaagcatgctgccagtgagagcatggaggag
tttgaagggccgtttaaaccagccaagattttgaaacagggcagtgtgctggagctcctc
aaaggacctgggtttgccgttccttttactcagacctcccctgtccccaaagccccccag
gagaccccagccctgtccaccaccaccaccaccccctcccttggggacttgttcaaagcg
cccacaggctccttggactgtgacgtctgcatggtgaagaataaacccactgccacaaag
tatgtggcctgtatgaccccacatccaaactctactttagcgaagaccgacagtgaacag
ttcacaacgctgtccgggctggagggttccaccactacaactgcagctggttttgaagcc
ctgttcacaaagtctgcgggaagctgggactgtgacacttgtctggttcagaacaagcct
caagcggtcaaatgtgtggcctgtgagacagccaagcctgggactggagttaaagccaca
ctgaccctgcatgccttctcggaggctaagactctgcccgctgctgcccccctcttgggt
ttcggggacaagtttaagaagccagagggagcgtgggagtgtgacatgtgcatggtgcag
aacaaggcgcaggacatcaagtgtgtttcctgtatgagcactaagccaggagggacggca
gcgactccatctctaactcccgcccctgtcagcaccactcctctactaggctttggggcc
cagttcaagaagccagatggagcgtgggagtgtgacgtgtgctgtgttcagaacaaggga
gcagaccaggcgtgtgtggcctgtcagaccctcaagcctggggctaaagtagagcctaaa
tcattcggttcctcgtcatttggtatccagtccttgtctgacaccggctcaggtggattc
aagtttgacatgggggcgtcatcggactctgcctctggttctgggggcttcaaattcggc
ggcaccctctctgactcctcttcagggggcttcaaattcggtgcagctgcctcatcagac
accacctcaacagacaccagcagctctgcaggcttcaaattcggcagctccacagagggc
ttcaagtttggagcatccactgcttccacccctgcagcggacgaggggaagacggctgaa
gcccccagtatgggtgccgggttcagatttggcattagcggtgggatctcgttcggcact
gcagcagctgctagcacggagagcaaaccctcagacggggggttctttggactatcaaaa
ccaacaaccaccacctctactttaagccttcctgtctctacagagaacgacagtggagct
tctacagaaactactaccacaacagcagcagatcctatttttgggaagctggctgagcct
cctgccctggccacaccactagggggcagcatatttgaggaatcgctagagaaagaccag
gaccctttcaccattgggaagtctgagaaggaggcctctatggggtctgggttcctgttc
agtgctgctagtaaagaggcggaggcatcggctccccctggaggcttttccttctttatg
gtagatccatctgcagaccagcccaaagcacctaccttcacctttgggaagctggcagac
agtgagaccccagcagcaaaagcccctaagccctcattcagctttgggcaaagcgctaca
gatactgcagcctcaaagccagcgtttgggttcatggcaaccaccaccacctctacttcc
accacccctgcccccaggctgtttgggcccaccagcagcactaccccagcccctatcccg
gcccccagtactttcctgttcgggcagagtgcctccagtgaggccaccccagccaagtcc
ttcttgtttgggcagagtcaggacagcctgcctgcccctgcagcttccctgaaccctggc
ccagctcaacccttcctgtttgggtctggacctaacactgctgctccctccttcgctttt
ggagcggcaccgctctccactgcctcatctacagctccatcagcagcccctgctccgttt
gtattcagccctgcctcctcctctggctttgggtcgggacaagctcctacctttggtcag
ggtacctcccagcccaatgcccctgcgtttggttctcccaccccgtcccccttccctgcc
acggcctcccagccccctgccttcggagggaaggccaactctgtacctgtgttcgaccag
caagccaactccacgcccgcttttggctcatccgccacaccaggtggcggtttccagttt
ggaggagtcagtgcattcggcacgtccagtaacagcacaggggtgtttgctttcggaggg
gcaccaggagggtcccccgccccttctgccacgccctccatggcaccccaacccagtgca
cctggaggtggctttaactttattgggtcaacgaagagcaccactttcactgcagcccct
gcaggacagaactcaatcgctagacgcaagatcaaaacagctgtccggcgtaagaagtaa
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