Salmo trutta (river trout): 115174009
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Entry
115174009 CDS
T08542
Name
(RefSeq) cytoplasmic dynein 1 intermediate chain 1-like isoform X1
KO
K10415
dynein cytoplasmic 1 intermediate chain
Organism
stru
Salmo trutta (river trout)
Pathway
stru04145
Phagosome
stru04814
Motor proteins
stru05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
115174009
09142 Cell motility
04814 Motor proteins
115174009
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
115174009
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
stru03036
]
115174009
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
stru04812
]
115174009
Chromosome and associated proteins [BR:
stru03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Motor proteins
Dynein complex
115174009
Cytoskeleton proteins [BR:
stru04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
115174009
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
Dynein_IC2
Beta-prop_EML
WD40_Prp19
WDR55
WD40
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
Beta-prop_HPS5
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_SPT8
Beta-prop_EIPR1
HCMVantigenic_N
Motif
Other DBs
NCBI-GeneID:
115174009
NCBI-ProteinID:
XP_029588449
Ensembl:
ENSSTUG00000035595
LinkDB
All DBs
Position
34:complement(30449212..30612237)
Genome browser
AA seq
631 aa
AA seq
DB search
MADKSDLKAQLERKKQRLAQIREEKKKRKEEERKKETETQPKAEAAPVDSDLDRKRRETE
ALLQSIGISPEPSLVPIPMSQSKSVSRHSTPSETRSQDSADGAAASRTLQWDSDPSVLQL
QADSEQGRRMHRLGASKITQVDFLPREVVSYCKETQTTIIHLSEEEEEEDEEITELKPGP
DSDQHEEEDSMETKEGYPCTELTEEEKQQILKSEEFLSFFDCSIRVMERALAQESDIFFD
YSGQDLDDKEGDLQGGSSLSLSRLFYDDHWSKHRVITCLDWSPQYSELLVASYNNNEDAP
HEPDGVALVWNMKFNKNTPEYVFHCQSSVVSVGFAWFHPNLVVGGTYSGQIVLWDNRSHR
RTPVQRTPLSAAAHTHPVYCVNVVGTQNANNLITVSTDGRMCSWSLDMLSQPQESMELVY
NKSKAVAVTGMAFPTGDVNNYVVGSEEGTVYTASRHGSKAGICEMFEGHHGPVTGLSCHN
AVGPVDFSHLFVTSSFDWTVKLWSTEHNKPLYSFEDNADYVYDVMWSPLHPAMFAVVDGI
GRLDLWNLNNDTEVPTASVTIEGACALNRVRWGSGGKEVAVGDSEGRLWIYDAGELAVPH
SEDWAHFTHTLMELKANRADREEEGPVELMP
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atggcagacaaaagtgacctaaaagcccagctagagcgcaaaaagcagcggctagctcag
atcagggaggagaagaagaagaggaaggaggaggagaggaagaaggagacagagacgcag
ccgaaggctgaagctgccccagtggactctgacttggaccggaagcgcagagagacagag
gcgctcctacagagcatcggcatctccccagaaccatcactagtcccgatccccatgtcc
caatccaaatcagtgagccgacacagcacccccagtgagacgagaagccaggactcagcc
gatggggccgcagccagcaggaccctgcagtgggactctgacccctctgttctgcagctg
caggcagactccgagcaagggcgcaggatgcatagactgggggcatctaagatcacacag
gtagacttcctacccagagaggtggtgtcgtactgcaaagagactcagacgaccatcatc
catctgtctgaggaggaggaagaggaggatgaagagatcacagagctgaagcctggtcca
gattctgaccagcatgaggaggaggacagcatggagacgaaagagggctacccctgcacg
gagctgacagaggaagagaagcagcagatcctgaaatcagaggagttcctcagtttcttt
gactgcagcatcagggtgatggagagagccctggcccaggaatcagacatcttcttcgac
tacagcggacaagacctggatgacaaggagggggacttacaaggtgggtccagtctgtcc
ctcagtaggttgttctatgacgatcactggtccaaacatcgagtcatcacctgtctggac
tggtcccctcagtactcagagctgttggtggcatcctacaacaacaatgaggatgctcct
catgagcctgacggtgtagctctggtctggaacatgaagtttaacaagaacacacctgag
tatgtcttccactgccagtcttcagtggtgtcggtgggctttgcctggttccatcctaac
ctggtggtgggggggacctactctggccagatagtactgtgggacaaccgcagccaccgc
aggactcctgtacagagaacccccctctcagctgcagctcacacgcacccggtatactgt
gtaaacgtggtgggaacccagaatgccaacaacctgatcactgtgtccacagacggcagg
atgtgctcctggagtcttgacatgctctctcagccacaggagagcatggagctggtgtac
aacaagtctaaagcggtggctgtgacaggcatggcgttccccactggagacgtcaataat
tatgtggtggggagtgaggagggaaccgtgtacactgcatccagacacggcagcaaggcg
gggatctgtgaaatgttcgagggccaccatgggcctgtgacgggcctcagctgtcacaac
gccgttggccctgtagacttctcccacctcttcgtcacctcgtcgttcgactggactgtc
aaactgtggagcacagagcacaataaacccctgtactcctttgaggacaacgctgactac
gtctatgatgtcatgtggtcccctctgcacccggctatgtttgccgttgtggacgggatt
ggccggctggatctgtggaacctcaataatgacacagaggtccccacagccagtgtgact
atcgagggagcctgcgccctaaacagggtacgttgggggtcggggggcaaggaggtagcc
gtgggtgactcggagggccgtctgtggatctacgacgcaggagagctggcagtgccccac
agtgaggactgggcacacttcacccacaccctgatggagctcaaagccaaccgggccgac
agggaggaggaagggcctgtggaactgatgccatag
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integrated database retrieval system
