Salmo trutta (river trout): 115174087
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Entry
115174087 CDS
T08542
Name
(RefSeq) ribonuclease ZC3H12A-like
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stru03019
]
115174087
Messenger RNA biogenesis [BR:
stru03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
115174087
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
Regnase_1_C
zf-CCCH_4
UBA_N4BP1_C
zf-CCCH_2
zf-CCCH
Motif
Other DBs
NCBI-GeneID:
115174087
NCBI-ProteinID:
XP_029588617
Ensembl:
ENSSTUG00000049867
UniProt:
A0A674EYU8
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All DBs
Position
34:35961940..35978633
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AA seq
700 aa
AA seq
DB search
MKIGAISTLSPVKDVLPWKEFSHTARLSPTEPHDTVGWLSTLPALHNHPHPPCPICERMH
PGTHCSAPEESGKTPAEPGEAQLDFYRKLGYSPAQVQTVLQKFGLNTDTNRVLGELVRTG
AGPEGIEKEREKEGASSTVSILVARGETLSNLPLTPPPSQGDVPSEEGDALRPIVIDGSN
VAMSHGNKEMFSCLGIQLAVNFFLDRGHTDITVFVPSWRKEQPRPDVLIRDQHILRELER
KKIVVFTPSRRVAGKRVVCYDDRFIVKLAHETSGIIVSNDTYRDLQGERQDWKRFIEERL
LMYSFVNDKFMPPDDPLGRHGPTLENFLLKVPRLPRKQPCPYGRKCTYGMKCKFYHPERA
NQSRCSLADELRKKAKLSLSEHKHPTSGAGPAYGLSLEERTAQKLPLEQRYGSLKKGHIS
ENVLLIKGSHRSSRRFPTKDKANRHFMTDLDSAMPSGSHSPTDLDSALPSGSQERLDSGL
GSFESQVSDPSRDHCDRYGKAGYRNCMSLPSMRQQIYSLPSNLPSSCSSHPPQPLLGPSA
GYQQHRSRGPASTHNNTHSPHNSMGPASTYHPGKITYRPPYYLSYGAPIYPVGKHQYRYP
DDFQQESRAHPPQQTYWSDPFGTYPQTLLSTAQVEKQRHWLLPRTQPHPHGEGREREEVR
MKLLAIFNGSLVDKVMDMFPQLMDPQRLAAEILILQSQGL
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atgaagattggtgctatctcaacgctgagtccggtcaaagatgtcttgccatggaaagag
ttctcccacacagcccgtctgagccccacagagccccacgacacagttggatggctgtcc
actctgcctgcccttcacaatcatcctcatccaccctgtcccatctgtgagagaatgcac
cctggtacccactgctctgccccggaggagagcggcaagacccccgcagaacctggagag
gctcagctggacttctaccgtaaactgggttactccccagcacaggtccagaccgtgctg
cagaagtttggcctgaacacagacactaacagggttctgggggagctggtgcggacggga
gccggcccagaagggattgagaaggagagggagaaggagggagcctcatctaccgtgtct
atcctggtggcccgaggggagaccctcagtaacctgcccctcacccctccacccagccag
ggcgatgtacccagtgaggagggagatgccctgagacccatagtgatcgatgggagcaac
gtggctatgagccacgggaacaaggaaatgttttcctgcctgggaatccagctggcggta
aacttcttcctggacagaggtcatactgatatcaccgtgtttgttccctcatggaggaag
gagcagcctagaccagatgttctcatcagagatcaacacattttgcgtgagctggagagg
aagaagatcgtggtgttcaccccttcgcggcgggttgcaggcaaacgggtggtctgctat
gacgatcgcttcatcgtcaagctggcgcatgagacctccggcatcatcgtgtccaacgac
acctaccgtgaccttcagggcgagaggcaggactggaagcgcttcattgaggagaggcta
ctcatgtactccttcgtcaatgacaagttcatgcctcctgatgaccctctgggtcgccat
ggtcccaccctggagaactttctactgaaggttcctcgtttaccacggaaacagccgtgc
ccttatggaaggaaatgcacttacgggatgaagtgtaaattctaccacccggaacgagcc
aaccaatcccgttgctctctggctgacgagctgcggaagaaggccaagctatctttatca
gaacacaaacaccccacctcaggtgctggacctgcctatggcctgtctctggaggagagg
acggctcagaaactgcctctagaacagaggtatggctccctgaagaaaggccacatcagt
gagaatgtgcttctgatcaagggaagccatcgttccagccggaggttcccaactaaggac
aaggccaaccgacacttcatgaccgatctggactcggccatgcccagtggctctcactcc
ccgacagacctggactcggccctgcccagtggctctcaggagcggctagattctggtctt
ggctccttcgagagccaggtgtctgacccctccagggaccactgtgaccgttatgggaag
gctgggtacaggaactgcatgtccctccccagtatgagacaacaaatctattccctgcca
agcaacctgccttctagctgcagctctcatcctcctcagcctttactgggccccagcgca
ggataccaacaacatcgcagcaggggcccagccagcacccacaacaacacccacagccca
cataacagcatgggcccagctagcacctaccacccaggcaagataacctacagaccacct
tattacctcagctatggggcaccgatatatccagttgggaagcatcagtacaggtacccc
gatgacttccaacaggagagcagggcccaccctccacagcagacctactggtccgatccg
ttcgggacttatcctcagactctccttagcactgctcaagtggagaagcagagacactgg
ctactccctcggacacagccccacccccacggggagggcagggagagagaggaggtcagg
atgaagctgctggctatctttaacggcagtctggtggacaaggtcatggacatgtttcct
cagctcatggacccacagagattagctgctgagatcctcatcctgcagtctcagggcctg
tga
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