Salmo trutta (river trout): 115174121 Help Entry 115174121         CDS       T08542                                  Name (RefSeq) spliceosome RNA helicase DDX39B   KO K12812   ATP-dependent RNA helicase UAP56/SUB2 [EC:5.6.2.7] Organism stru  Salmo trutta (river trout) Pathway stru03013   Nucleocytoplasmic transport stru03015   mRNA surveillance pathway stru03040   Spliceosome Brite KEGG Orthology (KO) [BR:stru00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     115174121   09122 Translation    03013 Nucleocytoplasmic transport     115174121    03015 mRNA surveillance pathway     115174121  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:stru03019]     115174121    03041 Spliceosome [BR:stru03041]     115174121 Enzymes [BR:stru01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.7  DEAD-box RNA helicase      115174121 Messenger RNA biogenesis [BR:stru03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     EJC complex      115174121 Spliceosome [BR:stru03041]  Complex C   Other components    EJC/TREX     115174121  Other splicing related proteins   Spliceosome associated proteins (SAPs)    TREX complex     115174121 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  DEAD Helicase_C ResIII CMS1 Cas3-like_C_2 AAA_19 Motif Other DBs NCBI-GeneID:  115174121 NCBI-ProteinID:  XP_029588670 Ensembl:  ENSSTUG00000015447 LinkDB All DBs Position 34:complement(37218439..37235763) Genome browser AA seq 428 aa AA seqDB search MTEQDVENELLDYEEDDVVGDLSGGDILSIKKERVKGSYVSIHSSGFRDFLLKPELLRAI VDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPVTGQVSVLVMC HTRELAFQISKEYERFSKYMPTIKVAVFFGGLSIKKDEEVLKKECPHVVVGTPGRILALI RNKTLNLRHIKHFILDECDKMLEQLDMRRDVQEIFRLTPHEKQVMMFSATLSKEIRPVCR KFMQDPMEIFVDDETKLTLHGLQQYYVKLKDNEKNRKLFDLLDVLEFNQVVIFVKSVQRC VALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIAF NYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDETDARTLNDVQDRFEVNISELPDEIDI SSYIEPTR NT seq 1287 nt NT seq  +upstreamnt  +downstreamnt atgactgagcaggatgtggagaatgagctcttggactatgaggaggatgatgtggtggga gatctatcaggaggggatattctgtccattaaaaaggagcgtgtgaagggctcctatgtg tccatccattcgtctgggtttagagacttcctgttgaagcctgagctgctgagggcgatc gtggactgtggctttgagcatccctctgaggttcaacatgagtgcatccctcaggctatc ctgggtatggatgtgctgtgccaggctaagtctggtatgggcaagacggccgtgtttgtc ctggccaccctacagcagctggagcctgtcactggacaagtgtcagtgctggtgatgtgc cacacacgagagctggcgtttcagatcagcaaggagtatgagagattctccaagtacatg ccgactatcaaggtggcagtgttctttggtggcctgtctataaagaaggatgaggaggtg ttaaagaaggagtgtccccatgtggtggtggggacgccggggcgaatcctggccctgatc cgcaacaagaccctcaacctgcgacacatcaaacacttcatcctggacgagtgtgacaaa atgttggaacaacttgacatgcgcagagacgtccaggagatattccgtctgaccccccat gagaaacaggtcatgatgttcagcgccaccctgagcaaagagattcgccccgtctgccga aagttcatgcaagatccgatggaaatctttgttgatgatgagaccaagctgactctccac gggctgcagcagtactacgtcaaactgaaggacaacgagaagaacaggaagctctttgat ctcctcgacgtgctggaattcaaccaggtggtgatctttgtgaagtccgttcagcgctgt gtggctctggcccagctgttggttgagcagaacttcccggctattgccatccaccgcggg atgcctcaggaggaacgtctctctcgttaccaacaatttaaagacttccagagacgtatc ctggtggccaccaacctgtttggcagagggatggatatcgagagggtcaacatcgccttc aactacgacatgccagaagactctgacacgtacctgcacagggttgccagggcgggcagg tttggcaccaaaggcctggccatcacatttgtgtctgatgagacggatgcccgtacactt aacgacgtccaggaccgattcgaggtgaacatcagtgagctgcccgacgagatcgacatc tcatcttacattgaaccaacccggtaa

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