Salmo trutta (river trout): 115174185
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Entry
115174185 CDS
T08542
Symbol
csf1ra
Name
(RefSeq) macrophage colony-stimulating factor 1 receptor isoform X1
KO
K05090
macrophage colony-stimulating factor 1 receptor [EC:
2.7.10.1
]
Organism
stru
Salmo trutta (river trout)
Pathway
stru04010
MAPK signaling pathway
stru04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
115174185 (csf1ra)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
115174185 (csf1ra)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
stru01001
]
115174185 (csf1ra)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
stru04090
]
115174185 (csf1ra)
Enzymes [BR:
stru01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
115174185 (csf1ra)
Protein kinases [BR:
stru01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
115174185 (csf1ra)
CD molecules [BR:
stru04090
]
Proteins
115174185 (csf1ra)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
Ig_3
VEGFR1-3_N_Ig-like
I-set
Ig_2
Ig_PDGFR_d4
ig
Ig_VEGFR-1-like_5th
C2-set_2
Pkinase_fungal
Motif
Other DBs
NCBI-GeneID:
115174185
NCBI-ProteinID:
XP_029588730
LinkDB
All DBs
Position
3:35168863..35187437
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AA seq
993 aa
AA seq
DB search
MELYLAFLLGILPTAAQAEWRRPVIKLNSEVVVGPEVVLNPGTPLVLRCEGDGPVNWLTR
LSKHKSLISKGNGSVRTFTVDRPSAEHTGTYKCEYTSGNVKGRDLFSTVHVYVKDPDSLF
WTSSTSLRVVRKEGEDHLLPCLLTDPEATDLGLRMDNCTSVPPGMNYTADPRRGILIRNL
HPSYNADYVCSAKLHGVERTSKTFNLNIIQRLRFPPYVFLEKNEYVHIVGEKLSIHCTTH
NPNFNYNVTWNYSSKKRFTIEQKVQSVDSNRLDIESILTIPVVDQSDTGNITCIGTNEAG
VNKSTTSLMVVEEAYIRLSPQLSSKLAHQGLSIDVNEGEDLKVSVLIEAYPQIIGQHWDT
PTASSTQEQTFTRYNNRYSATLLLKRMIAQEQGQYTFYAKSSMANASITFQIQMYQRPVA
VVRWENITTLTCTSFGYPAPIILWYQCSGIRTTCNENTTGLQMPAPLLAQTVEVRREEYG
AVEIQSVLTVEPSSHRMTVECVAFNLVGVGKDTFAMEVSNIMFTSTLLGAAGVLAFLLLL
LMVLLYKYKQKPRYEIRWKIIQASEGNNYTFIDPTQMPYNEKWEFPRDKLKLGKILGAGA
FGKVVEATAYGLGEDDNAMRVAVKMLKARAHSDEREALMSELKILSHLGQHKNIVNLLGA
CTQAGPVLVITEYCSHGDLLNFLRHKQETFLNFVMNIPEVPEETSDYKNLCEGKQFIRSD
SGISSVCSDSYLEMRPGPQPVNSSLDSVCEDGGPDSWPLDMEDLLRFSYQVAQGLDFLAA
KNCIHRDVAARNVLLTDRRVAKICDFGLARDIMNDSNYVVKGNARLPVKWMAPESIFDCL
YTVQSDVWSYGILLWEIFSLGKSPYPSILVDIRFYNMIKCGYQMSQPDFAPPEMYTIMKM
CWNLEPTERPTFSKVSQLIERLLGEQPERPDQCSSLLSQEHQNVQLQQDMMVEELELCDD
NDEPKCCDGSCDQSCEHEEEEQPLVKTNNYQFC
NT seq
2982 nt
NT seq
+upstream
nt +downstream
nt
atggagctgtacctggcctttctgctggggatcctgcccactgcagctcaagcagaatgg
cggcgtcctgtgatcaagctaaactcagaggtcgtggttgggcctgaagtagtactgaac
cctggcaccccattggtcctgaggtgtgagggggatgggccagtcaactggttaacccgg
ttgtccaaacacaagagcttaatctccaagggcaacgggagtgtcagaaccttcacggtg
gaccgtccctctgcagaacacactgggacatataagtgtgaatataccagtgggaacgtc
aagggccgggacttgttctctacggtgcacgtatatgttaaagacccagacagcctgttt
tggaccagcagcacgtccctgcgtgtggtgaggaaggagggggaggaccacctgctcccc
tgcctgctgaccgacccagaggccacagacttggggctccgcatggacaactgtacctcc
gtgcccccagggatgaactacacagcagacccccgcagaggcattctcatccgcaacctc
caccccagctacaatgctgactatgtctgcagcgccaaactccacggggtggagaggact
tccaagactttcaacctcaacatcatccaaaggctacgtttcccaccttatgtattcctg
gaaaagaatgagtatgttcatatcgtgggcgagaagctgagcatccactgcaccacacac
aaccccaacttcaactataatgtcacgtggaattacagctccaaaaagagatttacaata
gagcagaaagtccaatcagtggacagtaaccgtctggacattgaaagcatcctgaccatc
cctgtagtggaccagtcagacacaggcaacattacctgcatcggcaccaacgaggctgga
gtcaacaaatccaccacctccctgatggttgtagaggaggcctacatccgtctttctccc
cagctgtcctccaagctggctcaccagggcctgtccattgacgtgaacgagggggaagac
ctgaaagtcagtgtcctgatcgaggcgtaccctcagatcataggccagcactgggacacc
cctacagcctcctccacgcaggaacaaacctttacacgctataacaacaggtattccgca
accctgctgctcaagaggatgattgcacaggagcagggccagtacaccttctatgccaag
agttccatggccaacgcatccattacattccaaatccaaatgtatcagaggccggttgcc
gtggtgagatgggagaacatcaccaccctcacgtgcacgtcattcggttaccctgctccc
ataatcctctggtaccagtgctctggaatccgaaccacgtgcaatgagaacacaacaggt
ctccagatgcctgctcctctcttggcccaaacagtcgaggtccggagggaggagtatgga
gcggtcgagatccagagcgtcctgacagtggaaccgtccagccataggatgaccgtggag
tgtgtcgccttcaacctggtcggagtcggcaaagacaccttcgccatggaagtttccaat
ataatgttcacctccactctattgggagcagctggtgttctggcctttctcctcctgcta
ctcatggtcctgctctacaagtacaaacagaaaccaagatatgagatccggtggaagatc
atccaggccagtgaaggaaacaactacacctttatcgacccgactcagatgccgtacaat
gagaagtgggagtttcccagggacaagctcaagctaggaaagatccttggagccggggcc
tttgggaaggtggtggaggccacagcctatggtctgggggaggacgataacgcgatgcga
gtggctgtaaagatgctcaaagccagggcccactcagatgagagagaggctttgatgtca
gaactgaagattctgagtcacctgggacagcacaagaacattgtcaacctcctgggagcc
tgcactcaggcgggacctgtactggtgatcactgagtactgtagtcatggcgaccttctg
aacttcctgcgacacaagcaggagaccttcctgaactttgtcatgaacataccagaggta
ccagaagagaccagtgactacaagaacctctgtgaggggaaacagttcattagaagtgat
agtgggatatccagtgtgtgttctgacagctacctggagatgaggcctggtccccagcct
gtcaactcctctctggattctgtgtgtgaggatggtgggccggactcgtggccgttggac
atggaggacctgctgagattctcctaccaggtggctcagggcctggacttccttgcagcc
aagaattgtattcaccgggacgttgcagcccggaacgttctcctgacagaccgccgtgtg
gctaagatctgtgacttcggcctggcacgtgacatcatgaatgactccaactatgtggtg
aagggcaatgcgcgtctgccagtgaagtggatggctccagagagtatctttgactgtctc
tacactgtccagagtgacgtctggtcctatgggatcctgctatgggagatcttctctcta
ggaaagagcccctaccccagtatcctggtggatattagattctacaacatgataaagtgt
ggttatcagatgtctcaaccagacttcgcacctccagagatgtatacaatcatgaaaatg
tgctggaatctggagccaacagagcgaccgaccttcagcaaggtcagccagctgattgag
agattactgggtgagcagccagaacgtccagaccagtgttcttctctcctgtcccaggag
caccagaacgtccaactgcagcaggacatgatggttgaggagttggagctgtgtgatgat
aatgatgagcctaagtgttgtgacggctcctgtgaccagtcgtgtgagcacgaagaggag
gagcaaccactggtgaagaccaataactatcagttctgctga
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