Salmo trutta (river trout): 115174393
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Entry
115174393 CDS
T08542
Symbol
snw1
Name
(RefSeq) LOW QUALITY PROTEIN: SNW domain-containing protein 1
KO
K06063
SNW domain-containing protein 1
Organism
stru
Salmo trutta (river trout)
Pathway
stru03040
Spliceosome
stru04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
115174393 (snw1)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
115174393 (snw1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
stru03041
]
115174393 (snw1)
Spliceosome [BR:
stru03041
]
Complex B
Other components
Prp19-related factors
115174393 (snw1)
Complex C
115174393 (snw1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SKIP_SNW
TPR_30
Motif
Other DBs
NCBI-GeneID:
115174393
NCBI-ProteinID:
XP_029588769
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All DBs
Position
35:12341884..12352716
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AA seq
381 aa
AA seq
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MSLMSFLPAPTQLSQDQLESEERARAQRSHSTALVSSRREPPPYGYRKSWVPRSLEDFGD
GVAFPEIHVAQFPLEMGRKKKRSNALAVQVDGEGKIARQGKDKVIFSKYSDLLPKEVPSD
DAPELQKPDEEAVKELTEKTRDALMKQVSQKIAAAMPVRAADKQARHSASGCYSRINKKI
PRGPXAPVMHSPSRKVLLGFIQTWKIPPCISNWKNAKFYTTPLDKHLAADGRGLQTVHIN
ENFAKLAEALYNADRKAREAVEMRAQVEKMAQKEKGKKEEKLRELAQMAPDRGAGIKGHG
GDKGGEDGEARERDEIRHDGRKERQHDRNISRAAPDKRPSKLQRDQARDVSELIALGQPN
PRASSETHYDQRLFNQTKVCS
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgtcacttatgagcttcctaccggcgccgactcagttgtcccaggaccagctggagtcc
gaggagagggcccgggcacagaggtcccactccaccgccctcgtctcctcccgcagagaa
ccccctccctacggttacaggaagagctgggtgccccgctctctggaagactttggagat
ggcgttgcgttccctgagatccacgtggcccagttccctctggagatgggaaggaagaag
aagcgctccaacgccctggctgtacaggtggacggtgagggcaagatcgccagacagggc
aaggacaaggtgattttcagtaagtactcagacctgcttcctaaggaagtgccgagcgac
gatgccccagagttgcagaagcctgacgaggaggctgtcaaagagctgacggagaagacc
cgcgatgctctgatgaagcaggtctctcagaagatagctgcagctatgcctgtgagggca
gctgacaaacaggcccggcacagtgcatcaggttgctattccaggatcaataagaagatt
cctcgtggacctncagcacctgtcatgcactcgccaagcagaaaggtactgttggggttc
atacagacttggaagattcctccctgcatctcaaactggaagaacgcaaagttttacacc
acccccctggacaagcatctggcagcggacggtagaggactgcagaccgttcacatcaat
gagaactttgccaaactggccgaggcgctctacaatgctgacagaaaggccagagaggct
gtggagatgagagcccaggtggagaagatggcccagaaagagaaggggaagaaggaggaa
aagctcagagagctggctcagatggcgccagaccgtggggcagggatcaaaggtcacgga
ggggacaaaggtggtgaggacggtgaggccagagagcgtgacgagatccgccatgacggg
aggaaagagagacagcacgacaggaacatctcccgagccgcccccgataagaggccgtcg
aagctgcagagagaccaggccagggacgtcagtgagctcatcgctctgggtcagcccaac
cctagagcctccagtgagactcattacgaccagagactattcaaccagaccaaggtttgt
tcctga
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