Salmo trutta (river trout): 115174446
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Entry
115174446 CDS
T08542
Name
(RefSeq) syntaxin-binding protein 5-like isoform X1
KO
K08518
syntaxin-binding protein 5
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
stru04131
]
115174446
Membrane trafficking [BR:
stru04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
115174446
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
115174446
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LLGL
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
WD40_WDHD1_1st
ANAPC4_WD40
WD40
Beta-prop_IFT140_1st
WD40_Prp19
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_RIG_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_NUP159_NUP214
KNTC1_N
Lgl_C
Beta-prop_EML
Beta-prop_Vps41
Beta-prop_VPS8
CFAP43_N
VPS8_N
Beta-prop_WDR35_TULP_N
Synaptobrevin
WD40_like
Beta-prop_IFT122_2nd
Motif
Other DBs
NCBI-GeneID:
115174446
NCBI-ProteinID:
XP_029588824
Ensembl:
ENSSTUG00000023731
LinkDB
All DBs
Position
35:complement(2089979..2249342)
Genome browser
AA seq
1153 aa
AA seq
DB search
MKKFNIRKVLDGLKEQASSSASSGQSCTQENNLMQETLQSENFQLCKTVRHGFPYQPSSM
AHDPVQKILAIGTQSGALRLFGRPGVECYCQHESGAAVISLQFLINEGALVSALADDSVH
LWNLRQKRPAILHSLKFNRERITFVHLPFQSKWLYIGTEKGNIHIVNVESFTLSGYVIMW
NKAIELSSKAHPGPVVHISDNPMDEGKLIIGYESGIVVLWDLKSKKADYRYTYDEAIHSV
AWHHEGKQFICSHSDGTLTIWNIKGQGKPFQTITPHGKQPKDGKKPEPCKPILKVEYKTT
RLGDPFMILSGGLSYDTVGRRPCLTVMHGKSTAVLEMDYPIVDFLTLCETPYPNDFQEPY
AVVVLLEKDLVVIDLAQNGYPIFENPYPLTIHESPVTCCEYYADCPVDLIPALYSVGSRQ
KRQGYSKKEWPISGGNWGLGTQSYPEIIITGHADGTVKFWDASAIMLQVLYKLKTAKVFE
KSRNNKEEKQNTEIVDEDPFAIQIMAWCPESRMLCVAGVSANLIIYRFSKQEITTEVVQL
LEVRLQYEVNDMESPPEGGGGGDRGGGGDRDLPTPGAASPSPQTTGPPTHPSTSSNSSDG
VRDNVPCLKVRSTPLKQSSGYQVELVVQLVWVSGEPPQQITSLALNSSYGLIVFGNSNGL
AVVDYLQKTVLLNLGTVELYGSNDPYQRQPRSPRKTRQPSGGLCDINEGSASEDRCKSPT
SVLALNHQQFYNGSGGRGAKMSRKLSLPTELKPDLVLLSVCPPRGANPLDHRDNSFSRSR
SSSVTSIDKEAREAITSFHFCETFARKGDSTITPCLYVGTSLGTVLAVALNLPPAGEQRL
LQPVIVLPSGTLGRLKGSILRMAFLDNTGTFLPPAFELWYEPNAVGADSEERDKARKRRP
VSVSPSTSQELQESQYAVVCSEKQAKVIALPSQNCIFKHSITETSFVLRADVVQMNIGNC
VACFCANGHIMTLSLPGLRPLLDVNYLPLTDMRIARTFCFTNLGQAMYLTSPTEIQRITY
SQETCENLQEMLGELFTPVETPEAPNRGFFKGLFGGGATSLDREELFGETQAGKASRGLA
QHIPGPQGLEGMKGAASGVVADLARARIALDERGQKLGELDERTAAMLASADSFGKHAHD
MMLKCKDKKWYQF
NT seq
3462 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagtttaacatcaggaaggtactggacggcctaaaggagcaagcgtcttcctcg
gcttcgtctggccagtcgtgcacccaggagaacaatttgatgcaggagacccttcagtcc
gagaattttcaactctgcaagactgtccgtcatggcttcccctatcagccgtcgtccatg
gcccatgacccagtccagaagatcctggccattgggacccagagtggggccctccgactg
tttggtcgtccaggtgttgagtgctactgtcaacatgagagtggagccgctgtcatctcg
ctacagtttctcatcaacgagggggcgctggtgagtgctctggcagatgacagcgtgcac
ctctggaacctgaggcagaagaggcccgccatcctccactcactcaagttcaacagagag
aggatcacgttcgtccacctgcccttccaaagtaaatggctgtacatcggcacagagaaa
ggaaacatccacatcgtcaacgtggagtccttcacactctcaggctacgtcatcatgtgg
aacaaagccatcgaactatcctccaaggcccacccaggtcctgtggtccacataagtgac
aaccccatggatgagggaaagcttataattggatatgagtctgggatcgtggtcctgtgg
gatctgaaatcaaagaaggcagactaccggtacacgtatgacgaggcgatccactcggtt
gcctggcaccatgagggcaagcagtttatctgtagtcactcagacggaacgctcaccata
tggaacattaagggccagggcaagccatttcagacgatcaccccacatggaaaacagccc
aaggatggaaagaagccagagccttgcaaacccattctcaaagtggagtacaagaccact
agactgggagacccatttatgatcctgtctggaggtctgtcttatgacacggtgggtcgg
cggccatgtctgacggtgatgcatgggaagagtacagccgtgctggaaatggattacccc
atcgtagacttcctcacgctctgtgagacgccataccctaacgattttcaggaaccttat
gctgttgtggtccttctagaaaaggatttagtggtgatcgaccttgcacaaaatggttac
cccatattcgagaacccctatccactgaccatccacgagtctcctgtgacctgctgtgag
tactatgctgactgccctgtggacctcatacccgcactttactctgttggctccagacag
aagcgacagggctacagcaaaaaggaatggccaataagtggtggtaactggggccttggc
acacagagctaccctgagatcatcatcactgggcatgctgatgggactgtgaagttttgg
gatgcttctgcaataatgctccaggtactatacaagctgaagacggccaaggtgtttgag
aagagcaggaacaacaaggaggaaaagcagaacacagagattgtggatgaggacccgttt
gccatccagatcatggcctggtgtcctgagagcaggatgctgtgtgtggccggggtgtct
gccaacctcatcatataccgcttcagcaagcaggagatcaccactgaggttgtacagctg
ttggaggtgcgtttgcagtacgaggtgaatgacatggagtcccctccagaggggggagga
gggggtgaccgtggaggcgggggggaccgtgacctgcccacccccggagcagcctcaccc
agcccccagaccaccggacccccgacacatccctccaccagcagcaactcctctgacggg
gttcgagacaacgtaccctgccttaaggtgcgtagtacccctctaaagcagtcttcagga
taccaggtagagttggtggtgcagctggtgtgggtgagtggagagcccccccaacagatc
acaagcctggccctcaactcctcctacggactgattgtgtttgggaacagtaatggtctg
gcggtggtggactacctccagaagacagtgctgttgaacctggggacagtggagctgtat
gggtctaacgatccctaccagagacagcctcgctctccacgcaagacacgccagccttcc
ggaggtctgtgtgatatcaacgagggctctgcctcggaggaccgctgcaaatcccccact
tcagtgttggcgttaaaccatcagcaattctacaatggaagtgggggtagaggagcaaag
atgtcacggaaattaagcttgcctactgagctaaagccagacttggtcctcctgtctgta
tgtcctccacggggcgccaacccactagaccaccgggacaactccttcagccgttcacgc
tcctcctccgtcacctccattgacaaggaggcacgcgaggccatcacctccttccacttc
tgtgagacattcgctcggaagggggacagcaccatcacaccctgcctgtacgtgggcacc
tccctgggcacagtgctggctgtggccctcaacttgcctcctgctggggaacagaggcta
ctgcagcccgttatcgtcttgcctagcggtaccctggggcgtctgaagggcagtatcctg
aggatggccttcctggacaacacgggcaccttccttccccccgccttcgagctgtggtac
gagcccaacgccgtgggcgccgacagtgaggagcgagacaaagcccgtaaacgccgcccg
gtctctgtgtcgccctccacctcccaggagctgcaggagagccagtatgcggtggtgtgc
tctgagaaacaggctaaggtcatagcactgccctctcagaactgcatattcaaacacagc
atcacagagacatcgttcgtcctgagggctgacgtggtccagatgaacatagggaactgt
gtggcctgtttttgtgctaacggacacatcatgaccctcagtctgccgggtctgagaccg
ttgcttgatgtaaactacctgccgctgacagacatgcggatagcccggaccttctgcttc
accaacctgggccaggccatgtacctcacctcccccactgagatacagaggatcacatac
agccaggagacatgcgagaacctgcaggagatgctaggagaactgttcacaccagtggag
actccggaggctcccaaccgaggattcttcaagggcctttttgggggaggagcaacttcc
ctggacagagaggagctatttggtgagacgcaggcgggtaaagcatctcgtggccttgcc
cagcacatcccaggtcctcagggcctggaaggcatgaagggggcagcctcgggcgtggtg
gcggacctggcacgtgcccggatagcgctggacgagagagggcagaaactgggcgagctg
gacgagaggacggccgccatgctggccagcgcagactcctttggcaaacacgcccatgat
atgatgctgaaatgcaaagacaagaagtggtaccagttctga
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integrated database retrieval system
