Salmo trutta (river trout): 115174620
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Entry
115174620 CDS
T08542
Name
(RefSeq) neurexin-3b-like isoform X1
KO
K07377
neurexin
Organism
stru
Salmo trutta (river trout)
Pathway
stru04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
115174620
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
stru04131
]
115174620
Membrane trafficking [BR:
stru04131
]
Exocytosis
Calcium ion-dependent exocytosis
Others
115174620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
Laminin_G_3
EGF
Syndecan
Motif
Other DBs
NCBI-GeneID:
115174620
NCBI-ProteinID:
XP_029589186
LinkDB
All DBs
Position
35:complement(11593764..11937306)
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AA seq
1349 aa
AA seq
DB search
MGHAMVTISVDGILTTTGYTQEDYTMLGSDDFFYVGGSPSTADLPGSPVSNNFMGCLKEV
VYKNNDIRLELSRLARIVDPKMKLQGDVVFKCENVATLDPINFESPDSYLSLPKWNTKRM
GSISFDFRTSEPNGLILFTHGKAQDRRDAAGKKNNKVDFFAVELLDGGLYLLLDMGSGTI
KVKATQNKVNDGAWHHVDIQRDGRSGIISVDNRRTPFTASGENEILDLEGDLYLGGLPDN
RVGLVLPTELWTAMLNYGYVGCIRDLFIDGRSKNIRAISESQNTTGIRPTCSKVTGKQCD
SNPCKNNGACKEGWNRFICDCTGTGFWAGTCEREASILSYDGSMYMKVVMPSVMHTEAED
VSLRFKSQRAFGLLMAATSRDSADTLRLELDSGRVKLTVNLDCVRINCNTSKGPETLYAG
QKLNDNDWHSVRVVRRGKNFKLTVDEDMAEGQMAGDHTRLEFHNVETGILTERRFVSSSP
SSFIGHLQGLKFNGMFYIDMCKNGDIDFCELNARFGMRSIIADPVTFKSKGSYLGLATLQ
AYTTMHLFFQFKTTSPDGFILFNSGDGNDFIAVELVKGFVHYVFDLGNGPSLLKGNSDSA
LNDNQWHNVVITRDATNTHTLKVDAKSVTQNVNGAKNLDLKGDLFVAGLGPNMYQNLPKL
VVSREGFQGCLASVDLNGRLPDLINDALFRSGQIERGCEGPSTTCQEDSCANMGVCIQQW
ENFTCDCTMTSYTGTQCNDPGTTYIFGKGGGLITYTWPNNERPSTRTDRLAVGFSTTIKD
GILVRIDSAPRLGDYIMLHITEGKVGVTFNIGTSDISVKEVTMTINDGKYHLVRFTRNGG
NATLQVDNWPINEHFPTGPSDVERYQMANKKIPFNYKRPVEDWLQEKGRQLTIFNTQATI
SIGGNDRKRPYQGQLSGLYYNGLKVLNMAAEGHANIKVNGSVRLVGDVPTSRGAARTTTS
VPPEMSTTFIETTTTLSTTTTRKQRSPPTIQQTTDDIVSSAECSSDDEDLEECDSGHAGG
ELVIPVLVEDPIDIPPVSTHSPFIPLPPTLRPVFTIIEATKESLPMATEAGVPCLSDRGS
DDCDDGLDDGDDDDDDDGMVISGFGSGEAFDSSLPPTDDEDFYTTFSLVTDKILTTSAYE
GGYKALAPKWEAKDLRPSKASEAGRTTPTPPLPNLGGTVAEASLPSDGTPPKLPAGKMDN
REVIKPLQPDIVLLPLPTASFDLDGTKPRGPLITSPMLRTVPATLPTVPVVRRVPPGASE
VIRESSSTTGMVVGIVSAAALCILILLYAMYKYRNRDEGSYQVDETRNYISNSAQTNGAV
VKDKTPSGGSGAKGASSKRPKDKDKEYYV
NT seq
4050 nt
NT seq
+upstream
nt +downstream
nt
atgggacacgctatggtgactatctccgtggacgggatcctcaccacgacagggtatacc
caggaagactacaccatgctggggtctgatgacttcttctacgtgggtgggagtcctagt
acggctgatctacctggttctcccgtcagcaacaacttcatgggctgcctgaaagaggtg
gtctacaagaataacgacatccgtctggagctctcccgtctggcccgcatcgtagacccc
aagatgaagctccagggtgacgtggtgtttaagtgtgagaacgtggccaccctggaccct
atcaacttcgagagccctgactcctacctcagcctccccaagtggaacaccaagagaatg
ggttctatctccttcgacttcaggacctccgagcccaacggactcatcctgttcacccac
ggcaaggcccaggaccggcgggacgcagcagggaagaagaacaacaaagtagacttcttt
gctgtagagctgctggatggagggctgtatctgctgctggacatgggctcaggcactatc
aaggtcaaagccacccagaacaaggtcaatgatggagcctggcaccacgtggacatacag
agggatggacgttcaggcatcatctcagtggacaatcgtcgtactccgttcacggccagc
ggagagaacgagatcttagacctggagggagacctctacctgggtggtctccctgacaac
cgcgtaggcctggtgttacctaccgaactgtggacggccatgttgaactacggctacgtg
ggctgcatccgggacctcttcatagacggccgctccaaaaacattcgggccatctcggag
tctcagaataccacaggcatcaggcccacctgcagtaaagtcacggggaaacagtgcgat
agcaatccctgtaagaataacggagcatgtaaggaaggatggaaccggtttatctgtgac
tgcaccgggactgggttctgggccggcacgtgtgagagagaggcgtccatcctgagctac
gacggcagcatgtatatgaaagtggtgatgccaagcgtgatgcacactgaggcagaggac
gtctccctccgcttcaagtcccagcgtgcatttgggctcctaatggccgctacctcccgg
gactccgctgacacactccgtctcgagctggacagcggccgcgtcaaactcacggtcaac
ctagactgtgtcaggataaactgtaacaccagcaagggaccagagactctatatgctgga
caaaagctcaatgataatgactggcactctgtcagagtggtccgacgcggtaaaaacttc
aaactgacggtcgacgaagacatggctgaaggccagatggcaggtgaccacactcgtctg
gagttccacaatgtggagacagggattctgacagagagacgtttcgtctcctcctccccc
tcctccttcattggacacctgcagggcctgaagttcaacggcatgttctacattgacatg
tgtaagaacggagacatcgacttctgcgagctcaacgcccgcttcggcatgcgctccatc
atcgccgacccggtgaccttcaagtccaagggcagctacctggggctggccaccttgcag
gcctacaccaccatgcacctgttcttccagtttaaaaccacctccccggacggcttcata
ctgttcaacagcggagacggaaacgactttatcgccgttgagctggtcaaagggtttgtc
cactatgtgtttgacctggggaacggtcccagtctgttgaaggggaacagtgacagtgcc
ctgaatgacaaccagtggcacaacgtagttatcaccagggacgccaccaacacacacacc
ctcaaggtggacgccaagtccgtcacacagaacgtcaacggagccaagaacctcgacctc
aaaggggatctgtttgtggcagggctggggcctaacatgtaccagaaccttcctaaactg
gtggtctctagggaaggtttccagggttgtctggcgtctgtagatctgaatggccgcctg
cctgacctcatcaacgacgccctgttccgctccggacagatcgaacgcggatgtgaagga
cccagcactacctgtcaggaagactcctgtgccaacatgggcgtttgtattcaacagtgg
gagaacttcacctgcgactgcaccatgacatcttacacagggacacagtgcaacgaccct
ggtaccacctatatcttcggtaagggagggggcctgatcacgtacacgtggcctaacaac
gagaggcccagcacgcgtaccgaccgcctggctgtgggcttcagcaccaccatcaaggac
ggcatcctggtccgcatcgacagcgcgccgcgactcggtgactacatcatgctacacatc
acggaaggcaaggtgggcgtgaccttcaacattggtacgtcagacatcagtgtgaaggag
gtaaccatgacgatcaacgacgggaagtaccacctggtgcgcttcaccaggaatgggggc
aacgccactctgcaggtggacaactggccaatcaacgaacacttccccacaggaccaagc
gatgttgagcgctatcaaatggctaataagaaaatcccattcaattataagaggccggta
gaagattggctacaggagaaaggccggcagctcaccatcttcaacacccaggctaccatc
tctataggcggtaatgaccgtaaacgtccctaccagggacagctgtctggtctctactac
aacggcctcaaggtcctcaacatggctgccgaaggccacgccaacatcaaggtgaacggg
agcgtgcgattggtgggggatgtacccaccagtaggggcgctgcccgcaccaccacctcc
gtgccacctgagatgtccaccaccttcatagagaccaccaccactctgtctacgaccacc
acgaggaaacagcgctctccacccaccattcagcagacgacagatgacatagtatcgtcg
gcggagtgttccagcgacgacgaggatctggaggagtgtgattctggacacgcaggaggg
gagttagtcatccccgtacttgtagaggatcccatagacatccctcctgtctccacccat
tctcctttcatccccctccccccaaccctccgccccgtcttcaccattatcgaggccacc
aaagagtccctgcccatggccactgaggcgggggtaccttgcttgtcggaccgaggcagc
gatgattgtgatgatggtcttgatgatggtgatgatgatgatgatgatgatggaatggtg
atatcggggtttggctctggcgaagctttcgactctagcctgccccccactgacgatgaa
gatttttacaccaccttctccctggtaacagataagatcttgaccacgtcggcctatgaa
ggtggctacaaagctctcgcgcccaagtgggaggccaaggacttgaggcctagcaaagcc
tcagaggcgggtaggactacacccaccccgcctctacccaacctcgggggcactgtagcg
gaggcgtccctcccctcggatggcacgccgcccaaactgcccgccgggaaaatggacaac
cgcgaggtgatcaaacccctacagccggacattgtcctgctgcctctgccgaccgcgtcc
ttcgacctggacggcaccaagccccgcgggcccctcatcacctcgcccatgctacgcacg
gtgcctgccacgttacccaccgtacccgtcgtaaggcgggtgcccccgggggcctcggag
gtgatacgagaatccagcagcacaacaggtatggtggtgggcatcgtctcggccgcggca
ctctgcatcctcatcctcctctacgccatgtacaagtacaggaacagagacgaaggctcc
taccaggtagacgagacacggaattacatcagcaactcggcacagaccaacggcgccgtg
gtgaaagataaaacgcccagtgggggcagtggtgccaagggagccagcagcaagagaccg
aaagacaaggacaaggaatactatgtatag
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