Salmo trutta (river trout): 115174826
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Entry
115174826 CDS
T08542
Name
(RefSeq) afadin
KO
K05702
afadin
Organism
stru
Salmo trutta (river trout)
Pathway
stru04517
IgSF CAM signaling
stru04519
Cadherin signaling
stru04520
Adherens junction
stru04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
115174826
04519 Cadherin signaling
115174826
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
115174826
04530 Tight junction
115174826
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Paralog
GFIT
Motif
Pfam:
AFDN
DIL
PDZ
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
115174826
NCBI-ProteinID:
XP_029589607
LinkDB
All DBs
Position
35:20191033..20237032
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AA seq
1375 aa
AA seq
DB search
MPPPAEDTFLTAIINYTNSSTVHFKLSPTYVLYMTCRYVMSSHYRPDIGPSERTHKVIAI
VNKMVSMMEGVIQEIPEADQKQKNIAGSLAFWMANASELLNFIKQDKDLSRITLDAQDVL
AHLVQMAFKYLVQCLQSDLSNYMPAFLDDPEEQNPQRPKIEDVLHTLTGAMSLLRRCRVN
AALTIQLFSQLFHFINMWLFNKLVMEADSGLCSHYWGAILRQQLSHIEAWAEKQGLELAA
DCHLSRIVQATTLLTMDKYSMQDVQNIHNTCFKLNSLQLNALMTNYHCAPDEPYIPPELI
DHVVAVAENTADELARSDGREVQLEEDPDLQLPFLLPEDGYSCDVVRNIPNGFQEFLDPL
CQRGFCRLTPHPRSPGTWTIHFEGVDCDSHFSADNSDLQMRKEPEVVTVTLKKHNGMGLS
IVAAKGAGQDKLGIYIKSVVKGGAADVDGRLAAGDQLLSVDGRSLVGLSQERAAELMTRT
GSVVTLEVAKQGAIYHGLATLLNQPSPMMPRASQGGRDKNGKLRPKSEGFELYNNSVQNG
SPESPQADWQAYPEPKKMSGEERLLKNRADHRSSPNVANQSQSPGGKAVYTRGPGTKITS
VSTGNLCVDDEPSPPHPEAYPIPTQTYPREYFTIPASKSTNRMDPAPGQLYADDRGPPGP
MEDHHHNSIAMQRVDHSQEELCDLPGGYPPTSLRPEDLVHLHQQQQREADYQWGSGEHWV
NHHQVSSSVESSTSSQEHLNYSSSSSNKTQSNHKSGPGRWKTPGPIAPHPGPVAQSTRTD
LPPPPPPPPPVHYQDFELQPDLPLPPPPSVTQQQAAAAAADRKKREEQQRWYEKEKARLE
EERERKRREQERKLGQVRNPAVPVAHNNNQHGGTLPPPTQHQQMPPPRSPMQQVPHPYLP
PQGQQQAQQQQPPRPEKLSTLPRAGTLPPQGNPMDTVIRELLPQQQPRTIERRDLQYITI
SKEELSSSDSLSPDPWKRDAREKLEKQQQLHIVDLLDREIQDLQAKPERTAEESDRLRKL
MLEWQFQKRLQESKHSDEEDEEDDDEDVDTMMIMQRLEAEKRARTAVPAISVLDLLQDEE
RRRKQQLEEIRKREAEDRAKQEEERRWREEERARREVDEKRRQEEEYYTRLEEGRRRQHE
EAERKLLTPDEPGLYRPPLPRDYQPQPPPDTASPATTATNAPPPPPQRNTSYLKTQVVSP
DALYTAKFVSYNDEEDEDTTGLAGQVKFSSTRKSYGDLPPAHKPQPPARKPRPMSDGIFL
SSSFQPPAVNANSTAGQPPPPPIKPSLIPTGNFKGFNSYTGNTTGVVGSGEVYKDPREKW
TKGGQEQENTLTEGAPESMTFKERQRLFSQGKEVSNKVKASRKLMELENELNTKQ
NT seq
4128 nt
NT seq
+upstream
nt +downstream
nt
atgccccctccagctgaagataccttcctgacggccatcatcaactacaccaacagctcc
acggtgcacttcaagctgtcccccacctacgtgttgtacatgacctgtcgctacgtcatg
tccagccactacaggcccgacatcggcccctcggagcgcacccacaaggtcatagccatc
gtcaacaagatggtgagcatgatggaaggagtcatccaggagattcctgaagcggaccag
aagcagaagaacattgcggggtccctggctttctggatggccaatgcctcagagctgctc
aacttcatcaagcaggacaaggacctgtcgcgcatcacactggacgcccaggacgtgctg
gcacacctcgtccagatggccttcaagtacctggtccagtgtctgcagtctgacctgagt
aactacatgcctgccttcctggacgacccagaggaacagaaccctcaaaggcccaaaata
gaggatgttttgcacactctgacgggcgccatgtcgctgctgcgtcgttgccgtgtaaac
gcggcgctgaccatccagctgttctcccagctctttcacttcatcaacatgtggctgttc
aacaagctggtgatggaggctgactctggactgtgttcacactactggggcgccatcctc
cgccagcagctcagccacatcgaggcctgggccgagaagcagggcctggagctggccgct
gactgccacctcagtcgcatcgtacaggctacgactctcctcaccatggacaagtactcc
atgcaggacgtgcagaacatccacaacacctgcttcaagctgaactccctgcagctcaac
gccctcatgaccaactaccactgtgctcccgacgagccttacatccccccagagctcata
gaccacgtggttgccgtggcggagaacacagcagatgagctggcccgtagcgacggccga
gaggtccagctagaggaggaccctgacctgcagctgcccttcctactgcccgaggacggc
tactcctgcgacgtcgtgaggaacattcccaacggattccaggagttcctggaccccctt
tgtcagagaggattctgtcggctaacccctcacccgcgctcccctgggacctggaccatc
cactttgaaggagtcgactgcgacagccacttctctgcagacaactcagacctgcaaatg
cggaaggaaccggaagttgtgacggtcaccctgaagaagcacaatggcatgggcctcagc
attgtggctgccaagggtgctgggcaggacaagctcgggatctacatcaagtctgttgtg
aagggaggcgcggctgacgtggacgggcgtctggctgcaggggaccagctgctgagtgta
gacgggcgcagcctggtgggcctctcccaggagagggctgcggagttgatgacgaggaca
ggttctgtggtaacactggaggtggctaaacagggagccatctaccacggcctggccacg
ctcctcaaccagccttctcctatgatgcccagagcgtcgcaaggagggcgtgacaagaat
ggcaaactgagaccaaagagcgaaggctttgaactgtacaacaactcggtccagaacggc
tctccagagagcccccaggccgactggcaggcctacccagaaccaaagaagatgagcggg
gaggagaggctactgaagaaccgggccgaccaccgctccagccccaacgtggccaaccag
agccagagtccgggagggaaggccgtctacacacgaggacctgggaccaagatcacctct
gtctccacgggcaacctgtgtgttgatgacgagccctctcctccccatccggaggcctat
cctattcccactcagacctaccccagggaatacttcaccatcccagcctccaagtctacg
aaccggatggacccggccccaggacagttatacgctgatgacaggggtcctcccggcccc
atggaagaccaccaccacaacagcatagctatgcagcgggtggaccactctcaggaggag
ctgtgtgacctcccggggggctaccctccaaccagcctgcgtcctgaggacctggtccac
ctgcaccagcagcagcagagagaggctgactaccagtggggcagtggggaacactgggtc
aaccaccaccaggtctcctcttccgtggagtcctccacctccagccaggagcacctcaac
tactcctcgtcctcctccaacaagacccagagcaaccacaagagtggccccggacgctgg
aagacccccggccccattgccccccacccaggccccgtggcccagtccacacgcacggac
ctccctccccctccaccgccccctccccccgtacactaccaggactttgagctccagccc
gacctgcccctgccccctcctccctcggtcacccagcagcaggccgcagcagcagccgcc
gaccgcaagaagcgcgaggagcagcagcgctggtatgagaaggagaaggcccggttagag
gaggagagggagaggaagaggagggagcaggagaggaagctgggacaggtccgtaaccca
gctgtgcctgtagcccacaacaacaaccaacacgggggcacactcccccctcccacacag
caccagcagatgccccctccccggtcccccatgcagcaggtgccccatccctacctcccc
ccccagggccaacagcaggcccagcagcagcagccccccaggccagagaaactgtccacc
ctgcccagagcgggcaccctgccccctcagggtaacccaatggacacagtgatcagagag
ctgctcccccagcagcagccccgcaccatcgagcgccgagacctgcagtacattaccatc
agcaaggaggagctgtcctccagcgacagcctgtccccagacccctggaagagggatgcc
cgggagaagctggagaagcagcagcagctgcacatcgtagacctgctggacagggagatc
caggacctgcaggccaagccggagcgtacggctgaggagagcgaccggctcaggaagttg
atgctggagtggcagttccagaagagactgcaggagtccaagcacagtgatgaggaagat
gaggaggatgacgacgaggacgtggacaccatgatgatcatgcagcggctggaggcagag
aagagagcaaggactgctgtcccagcaatctctgttctagacttgttgcaggacgaggag
cggcggaggaagcaacagctggaggagatccggaagcgcgaagcggaggaccgggccaaa
caggaggaggagagacgctggagagaggaggagagggccagacgagaggtcgatgagaag
aggagacaggaggaggaatactacacacgcctggaggaagggcggcgccggcagcacgag
gaggccgagcgcaagctgctgacgcctgacgagcctggtctgtacagacctcccctcccc
agggactaccagcctcagcccccccctgacactgcatcccccgcaaccactgccactaac
gctccaccacccccgcctcagagaaacacctcctacctcaaaacccaggtcgtctcccct
gacgccttgtacactgccaagtttgtctcgtacaatgatgaggaggatgaggacactaca
ggcctagcaggtcaggttaagttctcctccaccaggaagtcctatggcgacctcccgccc
gcgcacaagccgcagccgcctgcgcgcaagccccgtcctatgtctgatgggatctttctg
tccagctcattccagccgccggctgtcaatgccaacagtactgcagggcagccccctccc
cctcccatcaaacccagcctcatcccgacaggcaactttaaaggatttaattcatacact
ggaaacacaacaggggttgtaggatcaggagaagtttacaaggacccgcgagaaaagtgg
acgaaaggtggtcaagaacaggaaaacactttaactgaaggagccccggagagtatgaca
ttcaaggagcgccagcggctcttttcccaagggaaggaagtatccaacaaagtcaaggcc
tcgcgaaaactcatggagctggaaaatgaactcaatacaaagcagtag
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