KEGG   Salmo trutta (river trout): 115174886
Entry
115174886         CDS       T08542                                 
Name
(RefSeq) nucleoporin Nup43-like
  KO
K14305  nuclear pore complex protein Nup43
Organism
stru  Salmo trutta (river trout)
Pathway
stru03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:stru00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    115174886
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:stru03019]
    115174886
   03036 Chromosome and associated proteins [BR:stru03036]
    115174886
Messenger RNA biogenesis [BR:stru03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     115174886
Chromosome and associated proteins [BR:stru03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    115174886
SSDB
Motif
Pfam: WD40_Prp19 WDR55 WD40 WD40_CDC20-Fz Beta-prop_EML Beta-prop_EIPR1 WD40_WDHD1_1st Beta-prop_TEP1_2nd Beta-prop_EML_2 Beta-prop_WDR90_POC16_2nd Beta-prop_RIG_2nd Beta-prop_WDR75_1st WD40_MABP1-WDR62_2nd Beta-prop_SCAP Beta-prop_IFT140_1st EIF3I WD40_MABP1-WDR62_1st WD_LRWD1 KNTC1_N
Other DBs
NCBI-GeneID: 115174886
NCBI-ProteinID: XP_029589743
Ensembl: ENSSTUG00000033106
UniProt: A0A674BVI4
LinkDB
Position
35:23193792..23196508
AA seq 373 aa
MMEGINAKYVSQKISKTRWRPVSSSSLQQPDIFATGSWDNENNKISIWSIGENGISGLDD
EFEGDPQLVCEHKHNGDVLDLQFLDQDRIVTASSTGAVIIFRHHHNSQTLSVSQLWERAH
HYPCDNAPCTGIVCNSPEIVTVGEDGRIILFRADQEGVLRTIENADSSTIHDVTFLRTTE
ILTVNSIGQLKIWDFRQQGNEPSQILSLTGDRVPLHCVDRHPNQQHIVATGGQDGMLCIW
DVRQGNMPFSLMEAHSAEMWEVHFHPSNPDHLFSCSEDGSLLHWETSSNSDTPSFLQGGR
NTSIVSRSAIAPAGGNQSLISSWLTGDSSKGRLETTHMLPSQTLSVNSLDVLGQCLVCGT
DGEAIYVNKRVPI
NT seq 1122 nt   +upstreamnt  +downstreamnt
atgatggagggtatcaatgcaaagtacgtgtcacagaaaatcagcaaaacgagatggaga
ccggtctcatcttcgtctttacagcaaccagacatatttgctactgggtcttgggataac
gagaacaacaaaatttccatttggtccatcggagagaatgggatctccggtttggacgat
gaatttgagggagacccccaattagtatgtgaacacaaacataatggggatgttctggac
cttcaatttctggatcaagacagaatagtaacagcatcatcgactggagcagtgatcatc
tttcggcatcaccacaacagccagacattgtctgtttctcaattgtgggaaagagcacat
cattatccctgcgacaacgctccatgtactggaattgtgtgtaacagccctgagattgtc
acggtcggggaagatggaaggatcatcctcttcagagcggaccaggaaggagtgctgcgc
accatagaaaatgctgatagtagcacaatccatgatgtgactttcctaaggactacggag
atccttactgtcaattcaattggccagctcaaaatatgggacttcaggcagcagggcaat
gaaccatcgcagattctttcactaactggggacagagtcccactgcattgtgtggacagg
caccccaaccaacaacacattgtggccacaggggggcaggatggcatgctctgtatctgg
gatgtgagacaaggcaacatgcccttttcacttatggaggcacactctgctgaaatgtgg
gaggtccattttcatccatcaaacccagaccacctgttctcatgctcagaggatggatca
ctgttgcattgggagacttcctcaaattcagacacaccatccttcttacaaggtggacgg
aacacaagcatagtttcgcgcagcgcaatagccccagcaggtgggaaccagtccctcatc
agttcctggctcactggagactcaagtaagggacgccttgagaccactcacatgctgccc
agtcagaccctgtctgtgaacagtctggatgtgctgggacaatgcttggtgtgtggaacg
gacggagaggctatttatgtcaacaaacgggtcccaatttag

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